Skip to main content
OSTI.GOVU.S. Department of Energy Office of Scientific and Technical Information
U.S. Department of Energy
Office of Scientific and Technical Information
 

Genome-sequenced bacterial collection from sorghum epicuticular wax

Journal Article · · Microbiology Resource Announcements
DOI:https://doi.org/10.1128/MRA.00484-23· OSTI ID:2204432
 [1];  [2];  [3];
  1. Great Lakes Bioenergy Research Center, Michigan State University, East Lansing, Michigan, USA
  2. Great Lakes Bioenergy Research Center, Michigan State University, East Lansing, Michigan, USA, Department of Biochemistry &, Biophysics, Texas A&,M University, College Station, Texas, USA
  3. Centre National de la Recherche Scientifique, Laboratoire d'Ecologie Microbienne (UMR CNRS 5557, UMR INRAE 1418, VetAgro Sup), Universite Claude Bernard Lyon 1, Villeurbanne, France
+ Show Author Affiliations

ABSTRACT

A collection of 44 isolates isolated from the epicuticular wax of stems of energy sorghum is available at the Great Lakes Bioenergy Researcher Center, Michigan State University, MI, USA. We enriched bacteria with putative plant-beneficial phenotypes and include information on their phenotypic diversity, taxonomy, and whole-genome sequences.

Sponsoring Organization:
USDOE
Grant/Contract Number:
SC0018409; FC02-07ER64494
OSTI ID:
2204432
Journal Information:
Microbiology Resource Announcements, Journal Name: Microbiology Resource Announcements Journal Issue: 12 Vol. 12; ISSN 2576-098X
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (14)

Action of ultraviolet radiation (UV-B) upon cuticular waxes in some crop plants journal January 1985
Assembly of long, error-prone reads using repeat graphs journal April 2019
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing journal May 2012
Prokka: rapid prokaryotic genome annotation journal March 2014
Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation journal April 2021
Phyllosphere exudates select for distinct microbiome members in sorghum epicuticular wax and aerial root mucilage journal January 2023
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes journal May 2015
Real-Time DNA Sequencing from Single Polymerase Molecules journal January 2009
OrthoFinder: phylogenetic orthology inference for comparative genomics journal November 2019
Short-Read Assembly of Full-Length 16S Amplicons Reveals Bacterial Diversity in Subsurface Sediments journal February 2013
Solexa Ltd journal June 2004
Small-Scale Isolation of Genomic DNA from Streptomyces Mycelia or Spores journal March 1998
Molecular and Evolutionary Mechanisms of Cuticular Wax for Plant Drought Tolerance journal April 2017
Update on Cuticular Wax Biosynthesis and Its Roles in Plant Disease Resistance journal August 2020

Similar Records

Genome-sequenced bacterial collection from sorghum aerial root mucilage
Journal Article · Wed Dec 13 23:00:00 EST 2023 · Microbiology Resource Announcements · OSTI ID:2204451
Functional and genomic diversity of the sorghum phyllosphere microbiome
Dataset · Tue Jul 11 00:00:00 EDT 2023 · OSTI ID:3003510
Phyllosphere exudates select for distinct microbiome members in sorghum epicuticular wax and aerial root mucilage
Journal Article · Fri Jan 06 23:00:00 EST 2023 · Phytobiomes Journal · OSTI ID:1922611

Related Subjects