Respiration data, microbial community assembly data, and FTICR-MS data associated with: “Disturbance Triggers Non-Linear Microbe-Environment Feedbacks. Sengupta et al., 2021, Biogeosciences”
- California Lutheran University; California Lutheran University
- Pacific Northwest National Laboratory (PNNL)
- Pacific Northwest National Laboratory
This data package is associated with the manuscript “Disturbance Triggers Non-Linear Microbe-Environment Feedbacks, in revision in Biogeosciences (Sengupta et al. and 2021;https://bg.copernicus.org/preprints/bg-2021-51/). The study used hyporheic zone sediments as a model system to provide an integrated view of how disturbance modulates linkages among microbial ecology, biogeochemistry, and organic matter thermodynamics. Laboratory experiments exposed hyporheic sediment to varying wetting/drying dynamics. Data types include dissolved oxygen rates used to derive respiration rates, Fourier-transform ion cyclotron resonance mass spectrometry (FTICR-MS) data used to derive thermodynamic properties of organic matter, and microbial community assembly metrics derived from amplicon-sequence data of putatively active (cDNA) and whole community (gDNA). The outcomes of the study are condensed into a broadly applicable conceptual model linking external forcing, internal dynamics, and history. This data package is comprised of a file-level metadata (FLMD) csv, metadata csv, and seven folders that contain csv files, R scripts, xml files, and associated documentation: (1) Rates, (2) bNTI, and (3) FTICR, (4) Statistics_Analyses, (5) Raw OTU Beta dispersion Analysis, (6) bMNTD Randomizations, and (7) Data Dictionaries. The FLMD file has a description of each file included in the data package.
- Research Organization:
- Environmental System Science Data Infrastructure for a Virtual Ecosystem; Early Career Research Program: Watershed Perturbation-Response Traits Derived Through Ecological Theory
- Sponsoring Organization:
- U.S. DOE > Office of Science
- OSTI ID:
- 1807580
- Country of Publication:
- United States
- Language:
- English
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Related Subjects
DNA
Deoxyribonucleic acid
FTICR-MS
Fourier-transform ion cyclotron resonance mass spectrometry
Functional traits
Hyporheic zone
Mass spectrometry
Metabolite
Metabolomics
Microbial community
OM thermodynamic traits (Gibbs free energy and thermodynamic efficiency)
Organic matter
RNA
Respiration
Respiration Rates
Ribonucleic acid
River corridor
Sediments
Thermodynamics
bNTI