FTICR-MS and Biochemical Transformation Data from Global Inland River Water and Sediment Associated with: "Organic Matter Transformations are Disconnected Between Surface Water and the Hyporheic Zone"
- Pacific Northwest National Laboratory; Pacific Northwest National Laboratory
- Pacific Northwest National Laboratory
- University of Arizona/Pacific Northwest National Laboratory
This data package is associated with the publication "Organic Matter Transformations are Disconnected Between Surface Water and the Hyporheic Zone" submitted to Biogeosciences (Stegen et al., 2022). The study aims to understand how the diversity of OM transformations varies across surface and subsurface components of river corridors using inland surface water and sediments collected along river corridors across the contiguous United States. Sediment extracts and water samples were analyzed using ultrahigh resolution Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS). This dataset is comprised of one folder (WHONDR_S19S) which contains (1) a subfolder with R scripts used to process the data and to calculate biochemical transformations, (2) processed FTICR-MS data as csv files, sample collection metadata and climate data as csv files, (3) biochemical transformations profile, classifications and database as csv files, and (4) a readme file with more information regarding WHONDRS raw FTICR-MS data and processing scripts. Outside of the main folders there is a csv containing file-level metadata and a csv data dictionary defining column headers for all csv files contained in the data package. The samples were part of a WHONDRS (https://whondrs.pnnl.gov) study. The raw, unprocessed FTICR-MS data with additional data can be found at doi:10.15485/1729719 for sediments and doi:10.15485/1603775 for water. This data package contains the processed data used in the associated manuscript.
- Research Organization:
- Environmental System Science Data Infrastructure for a Virtual Ecosystem
- Sponsoring Organization:
- U.S. DOE > Office of Science > Biological and Environmental Research (BER)
- OSTI ID:
- 1839188
- Country of Publication:
- United States
- Language:
- English
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Related Subjects
54 ENVIRONMENTAL SCIENCES
Abiotic
Biochemical Transformations
Biogeochemistry
Biotic
Climate variables
ESS-DIVE CSV File Formatting Guidelines Reporting Format
ESS-DIVE File Level Metadata Reporting Format
FTICR-MS
Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS)
Hyporheic Zone
Mass spectrometry
Metabolite
Metabolomics
Organic matter
River
River corridor
Sediments
Stream
Surface water
Abiotic
Biochemical Transformations
Biogeochemistry
Biotic
Climate variables
ESS-DIVE CSV File Formatting Guidelines Reporting Format
ESS-DIVE File Level Metadata Reporting Format
FTICR-MS
Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS)
Hyporheic Zone
Mass spectrometry
Metabolite
Metabolomics
Organic matter
River
River corridor
Sediments
Stream
Surface water