Critical differences in 3D atomic structure of individual ligand-protected nanocrystals in solution

Kim, Byung Hyo; Heo, Junyoung; Kim, Sungin; Reboul, Cyril F.; Chun, Hoje; Kang, Dohun; Bae, Hyeonhu; Hyun, Hyejeong; Lim, Jongwoo; Lee, Hoonkyung; Han, Byungchan; Hyeon, Taeghwan; Alivisatos, A. Paul; Ercius, Peter; Elmlund, Hans; Park, Jungwon

doi:10.1126/science.aax3233

Critical differences in 3D atomic structure of individual ligand-protected nanocrystals in solution

Journal Article · Thu Apr 02 00:00:00 EDT 2020 · Science

DOI:https://doi.org/10.1126/science.aax3233· OSTI ID:1637314

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Center for Nanoparticle Research, Institute for Basic Science (IBS), Seoul 08826, Republic of Korea.; School of Chemical and Biological Engineering, and Institute of Chemical Processes, Seoul National University, Seoul 08826, Republic of Korea.
Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia.; ARC Centre of Excellence for Advanced Molecular Imaging, Clayton, VIC 3800, Australia.
Department of Chemical and Biomolecular Engineering, Yonsei University, Seoul 03722, Republic of Korea.
Department of Physics, Konkuk University, Seoul 05029, Republic of Korea.
Department of Chemistry, Seoul National University, Seoul 08826, Republic of Korea.
Department of Chemistry, University of California, Berkeley, CA 94720, USA.; Material Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.; Kavli Energy NanoScience Institute, Berkeley, CA 94720, USA.
National Center for Electron Microscopy, Molecular Foundry, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.

Precise three-dimensional (3D) atomic structure determination of individual nanocrystals is a prerequisite for understanding and predicting their physical properties. Nanocrystals from the same synthesis batch display what are often presumed to be small but possibly important differences in size, lattice distortions, and defects, which can only be understood by structural characterization with high spatial 3D resolution. We solved the structures of individual colloidal platinum nanocrystals by developing atomic-resolution 3D liquid-cell electron microscopy to reveal critical intrinsic heterogeneity of ligand-protected platinum nanocrystals in solution, including structural degeneracies, lattice parameter deviations, internal defects, and strain. These differences in structure lead to substantial contributions to free energies, consequential enough that they must be considered in any discussion of fundamental nanocrystal properties or applications.

Research Organization:: Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Basic Energy Sciences (BES). Scientific User Facilities Division

DOE Contract Number:: AC02-05CH11231

OSTI ID:: 1637314

Journal Information:: Science, Journal Name: Science Journal Issue: 6486 Vol. 368; ISSN 0036-8075

Publisher:: AAAS

Country of Publication:: United States

Language:: English

References (41)

Single-Particle Cryo-EM at Crystallographic Resolution Cheng, Yifan Cell, Vol. 161, Issue 3 https://doi.org/10.1016/j.cell.2015.03.049	journal	April 2015
Furan Hydrogenation over Pt(111) and Pt(100) Single-Crystal Surfaces and Pt Nanoparticles from 1 to 7 nm: A Kinetic and Sum Frequency Generation Vibrational Spectroscopy Study Kliewer, Christopher J.; Aliaga, Cesar; Bieri, Marco Journal of the American Chemical Society, Vol. 132, Issue 37 https://doi.org/10.1021/ja105800z	journal	September 2010
Size dependence of structural parameters in fcc and hcp Ru nanoparticles, revealed by Rietveld refinement analysis of high-energy X-ray diffraction data Song, Chulho; Sakata, Osami; Kumara, Loku Singgappulige Rosantha Scientific Reports, Vol. 6, Issue 1 https://doi.org/10.1038/srep31400	journal	August 2016
Control of Metal Nanocrystal Size Reveals Metal-Support Interface Role for Ceria Catalysts Cargnello, M.; Doan-Nguyen, V. V. T.; Gordon, T. R. Science, Vol. 341, Issue 6147 https://doi.org/10.1126/science.1240148	journal	July 2013
Classification and 3D averaging with missing wedge correction in biological electron tomography☆ Bartesaghi, A.; Sprechmann, P.; Liu, J. Journal of Structural Biology, Vol. 162, Issue 3 https://doi.org/10.1016/j.jsb.2008.02.008	journal	June 2008
Formation Mechanisms of Uniform Nanocrystals via Hot-Injection and Heat-Up Methods Kwon, Soon Gu; Hyeon, Taeghwan Small, Vol. 7, Issue 19 https://doi.org/10.1002/smll.201002022	journal	August 2011
Size Control of Monodispersed Pt Nanoparticles and Their 2D Organization by Electrophoretic Deposition Teranishi, T.; Hosoe, M.; Tanaka, T. The Journal of Physical Chemistry B, Vol. 103, Issue 19 https://doi.org/10.1021/jp983478m	journal	May 1999
High-performance transition metal-doped Pt3Ni octahedra for oxygen reduction reaction Huang, X.; Zhao, Z.; Cao, L. Science, Vol. 348, Issue 6240 https://doi.org/10.1126/science.aaa8765	journal	June 2015
Defect Luminescence from Wurtzite CuInS 2 Nanocrystals: Combined Experimental and Theoretical Analysis Leach, Alice D. P.; Shen, Xiao; Faust, Adam The Journal of Physical Chemistry C, Vol. 120, Issue 9 https://doi.org/10.1021/acs.jpcc.6b00156	journal	February 2016
Three-dimensional coordinates of individual atoms in materials revealed by electron tomography Xu, Rui; Chen, Chien-Chun; Wu, Li Nature Materials, Vol. 14, Issue 11 https://doi.org/10.1038/nmat4426	journal	September 2015
Probing the dynamics of nanoparticle formation from a precursor at atomic resolution Gao, Wenpei; Tieu, Peter; Addiego, Christopher Science Advances, Vol. 5, Issue 1 https://doi.org/10.1126/sciadv.aau9590	journal	January 2019
Electron paramagnetic resonance of individual atoms on a surface Baumann, S.; Paul, W.; Choi, T. Science, Vol. 350, Issue 6259 https://doi.org/10.1126/science.aac8703	journal	October 2015
A Critical Size for Emergence of Nonbulk Electronic and Geometric Structures in Dodecanethiolate-Protected Au Clusters Negishi, Yuichi; Nakazaki, Tafu; Malola, Sami Journal of the American Chemical Society, Vol. 137, Issue 3 https://doi.org/10.1021/ja5109968	journal	January 2015
Three-dimensional mapping of a deformation field inside a nanocrystal Pfeifer, Mark A.; Williams, Garth J.; Vartanyants, Ivan A. Nature, Vol. 442, Issue 7098 https://doi.org/10.1038/nature04867	journal	July 2006
3D structure of individual nanocrystals in solution by electron microscopy Park, J.; Elmlund, H.; Ercius, P. Science, Vol. 349, Issue 6245 https://doi.org/10.1126/science.aab1343	journal	July 2015
Crystal symmetry breaking and vacancies in colloidal lead chalcogenide quantum dots Bertolotti, Federica; Dirin, Dmitry N.; Ibáñez, Maria Nature Materials, Vol. 15, Issue 9 https://doi.org/10.1038/nmat4661	journal	June 2016
The surface science of nanoparticles for catalysis: electronic and steric effects of organic ligands Wu, Wenting; Shevchenko, Elena V. Journal of Nanoparticle Research, Vol. 20, Issue 9 https://doi.org/10.1007/s11051-018-4319-y	journal	September 2018
Lattice contractions of a nanoparticle due to the surface tension: A model of elasticity Huang, Zaixing; Thomson, Peter; Di, Shenglin Journal of Physics and Chemistry of Solids, Vol. 68, Issue 4 https://doi.org/10.1016/j.jpcs.2007.01.016	journal	April 2007
Direction-Specific Interactions Control Crystal Growth by Oriented Attachment Li, D.; Nielsen, M. H.; Lee, J. R. I. Science, Vol. 336, Issue 6084 https://doi.org/10.1126/science.1219643	journal	May 2012
Deciphering chemical order/disorder and material properties at the single-atom level Yang, Yongsoo; Chen, Chien-Chun; Scott, M. C. Nature, Vol. 542, Issue 7639 https://doi.org/10.1038/nature21042	journal	February 2017
Electron microscopy of gold nanoparticles at atomic resolution Azubel, M.; Koivisto, J.; Malola, S. Science, Vol. 345, Issue 6199 https://doi.org/10.1126/science.1251959	journal	August 2014
Three-Dimensional Quantification of the Facet Evolution of Pt Nanoparticles in a Variable Gaseous Environment Altantzis, Thomas; Lobato, Ivan; De Backer, Annick Nano Letters, Vol. 19, Issue 1 https://doi.org/10.1021/acs.nanolett.8b04303	journal	December 2018
Cross-Linked Nano-onions of Carbon Nitride in the Solid Phase: Existence of a Novel C 48 N 12 Aza-Fullerene Hultman, Lars; Stafström, Sven; Czigány, Zsolt Physical Review Letters, Vol. 87, Issue 22 https://doi.org/10.1103/PhysRevLett.87.225503	journal	November 2001
High-Resolution EM of Colloidal Nanocrystal Growth Using Graphene Liquid Cells Yuk, Jong Min; Park, Jungwon; Ercius, Peter Science, Vol. 336, Issue 6077 https://doi.org/10.1126/science.1217654	journal	April 2012
Quantitative measurement of displacement and strain fields from HREM micrographs Hÿtch, M. J.; Snoeck, E.; Kilaas, R. Ultramicroscopy, Vol. 74, Issue 3, p. 131-146 https://doi.org/10.1016/S0304-3991(98)00035-7	journal	August 1998
Influence of atomic site-specific strain on catalytic activity of supported nanoparticles Nilsson Pingel, Torben; Jørgensen, Mikkel; Yankovich, Andrew B. Nature Communications, Vol. 9, Issue 1 https://doi.org/10.1038/s41467-018-05055-1	journal	July 2018
Active and Selective Conversion of CO ₂ to CO on Ultrathin Au Nanowires Zhu, Wenlei; Zhang, Yin-Jia; Zhang, Hongyi Journal of the American Chemical Society, Vol. 136, Issue 46 https://doi.org/10.1021/ja5095099	journal	November 2014
Single-particle cryo-EM-Improved ab initio 3D reconstruction with SIMPLE/PRIME: Single-particle cryo-EM-Improved ab initio 3D reconstruction with SIMPLE/PRIME Reboul, Cyril F.; Eager, Michael; Elmlund, Dominika Protein Science, Vol. 27, Issue 1 https://doi.org/10.1002/pro.3266	journal	September 2017
Polymerization-Like Co-Assembly of Silver Nanoplates and Patchy Spheres Luo, Binbin; Smith, John W.; Wu, Zixuan ACS Nano, Vol. 11, Issue 8 https://doi.org/10.1021/acsnano.7b02059	journal	July 2017
Dynamics and Removal Pathway of Edge Dislocations in Imperfectly Attached PbTe Nanocrystal Pairs: Toward Design Rules for Oriented Attachment Ondry, Justin C.; Hauwiller, Matthew R.; Alivisatos, A. Paul ACS Nano, Vol. 12, Issue 4 https://doi.org/10.1021/acsnano.8b00638	journal	February 2018
Fourier shell correlation threshold criteria van Heel, Marin; Schatz, Michael Journal of Structural Biology, Vol. 151, Issue 3 https://doi.org/10.1016/j.jsb.2005.05.009	journal	September 2005
Selective increase in CO ₂ electroreduction activity at grain-boundary surface terminations Mariano, Ruperto G.; McKelvey, Kim; White, Henry S. Science, Vol. 358, Issue 6367 https://doi.org/10.1126/science.aao3691	journal	November 2017
Lattice-strain control of the activity in dealloyed core–shell fuel cell catalysts Strasser, Peter; Koh, Shirlaine; Anniyev, Toyli Nature Chemistry, Vol. 2, Issue 6 https://doi.org/10.1038/nchem.623	journal	April 2010
Surface modification-induced phase transformation of hexagonal close-packed gold square sheets Fan, Zhanxi; Huang, Xiao; Han, Yu Nature Communications, Vol. 6, Issue 1 https://doi.org/10.1038/ncomms7571	journal	March 2015
Size-Related Lattice Parameter Changes and Surface Defects in Ceria Nanocrystals Chen, Lan; Fleming, Pete; Morris, Virginia The Journal of Physical Chemistry C, Vol. 114, Issue 30 https://doi.org/10.1021/jp1031465	journal	July 2010
Solvent-induced surface disorder and doping-induced lattice distortion in anatase TiO ₂ nanocrystals for enhanced photoreversible color switching Yang, Kewei; Chen, Xiaoyu; Zheng, Zhenhuan Journal of Materials Chemistry A, Vol. 7, Issue 8 https://doi.org/10.1039/C8TA10045D	journal	January 2019
Advanced Computing in Electron Microscopy Kirkland, Earl J. https://doi.org/10.1007/978-1-4419-6533-2	book	January 2010
Atomic-scale determination of surface facets in gold nanorods Goris, Bart; Bals, Sara; Van den Broek, Wouter Nature Materials, Vol. 11, Issue 11 https://doi.org/10.1038/nmat3462	journal	October 2012
Atomic electron tomography: 3D structures without crystals Miao, J.; Ercius, P.; Billinge, S. J. L. Science, Vol. 353, Issue 6306 https://doi.org/10.1126/science.aaf2157	journal	September 2016
Effect of Strain on the Reactivity of Metal Surfaces Mavrikakis, M.; Hammer, B.; Nørskov, J. K. Physical Review Letters, Vol. 81, Issue 13 https://doi.org/10.1103/PhysRevLett.81.2819	journal	September 1998
Semiempirical GGA-type density functional constructed with a long-range dispersion correction Grimme, Stefan Journal of Computational Chemistry, Vol. 27, Issue 15, p. 1787-1799 https://doi.org/10.1002/jcc.20495	journal	January 2006

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