Complete genome sequence of Nitratifractor salsuginis type strain (E9I37-1T)

Anderson, Iain; Sikorski, Johannes; Zeytun, Ahmet; Nolan, Matt; Lapidus, Alla; Lucas, Susan; Hammon, Nancy; Deshpande, Shweta; Cheng, Jan-Fang; Tapia, Roxanne; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Ivanova, Natalia; Huntemann, Marcel; Mavromatis, Konstantinos; Ovchinikova, Galina; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Brambilla, Evelyne-Marie; Ngatchou-Djao, Olivier D.; Rohde, Manfred; Tindall, Brian J.; Göker, Markus; Detter, John C.; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Klenk, Hans-Peter; Kyrpides, Nikos C.

doi:10.4056/sigs.1844518

Complete genome sequence of Nitratifractor salsuginis type strain (E9I37-1^T)

Journal Article · Fri Jul 01 00:00:00 EDT 2011 · Standards in Genomic Sciences

DOI:https://doi.org/10.4056/sigs.1844518· OSTI ID:1630572

Anderson, Iain ^[1]; Sikorski, Johannes ^[2]; Zeytun, Ahmet ^[1]; Nolan, Matt ^[1]; Lapidus, Alla ^[1]; Lucas, Susan ^[1]; Hammon, Nancy ^[1]; Deshpande, Shweta ^[1]; Cheng, Jan-Fang ^[1]; Tapia, Roxanne ^[3]; Han, Cliff ^[3]; Goodwin, Lynne ^[3]; Pitluck, Sam ^[1]; Liolios, Konstantinos ^[1]; Pagani, Ioanna ^[1]; Ivanova, Natalia ^[1]; Huntemann, Marcel ^[1]; Mavromatis, Konstantinos ^[1]; Ovchinikova, Galina ^[1]; Pati, Amrita ^[1] more »

USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
German Collection of Microorganisms and Cell Cultures, Braunschweig (Germany)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
Helmholtz Centre for Infection Research, Braunschweig (Germany)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Univ. of California, Davis, CA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Univ. of Queensland, Brisbane, QLD (Australia)

Nitratifractor salsuginis Nakagawa et al. 2005 is the type species of the genus Nitratifractor, a member of the family Nautiliaceae. The species is of interest because of its high capacity for nitrate reduction via conversion to N2 through respiration, which is a key compound in plant nutrition. The strain is also of interest because it represents the first mesophilic and facultatively anaerobic member of the Epsilonproteobacteria reported to grow on molecular hydrogen. This is the first completed genome sequence of a member of the genus Nitratifractor and the second sequence from the family Nautiliaceae. The 2,101,285 bp long genome with its 2,121 protein-coding and 54 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

View Accepted Manuscript (DOE)

Research Organization:: Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)

Sponsoring Organization:: German Research Foundation (DFG); USDOE Office of Science (SC), Biological and Environmental Research (BER)

Grant/Contract Number:: AC02-05CH11231; AC05-00OR22725; AC52-07NA27344

OSTI ID:: 1630572

Alternate ID(s):: OSTI ID: 1049899

Journal Information:: Standards in Genomic Sciences, Journal Name: Standards in Genomic Sciences Journal Issue: 3 Vol. 4; ISSN 1944-3277

Publisher:: BioMed CentralCopyright Statement

Country of Publication:: United States

Language:: English

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