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The Draft Genome Sequence of Nocardioides sp. Strain CF8 Reveals the Scope of Its Metabolic Capabilities

Journal Article · · Genome Announcements
 [1];  [2];  [3];  [4]
  1. Oregon State Univ., Corvallis, OR (United States). Dept. of Botany and Plant Pathology; Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Joint BioEnergy Inst.; DOE/OSTI
  2. Oregon State Univ., Corvallis, OR (United States). Dept. of Botany and Plant Pathology; Oregon State Univ., Corvallis, OR (United States). Moelcular and Cellular Biology Program; Oregon State Univ., Corvallis, OR (United States). Center for Genome Research and Biocomputing
  3. Oregon State Univ., Corvallis, OR (United States). Dept. of Botany and Plant Pathology; Oregon State Univ., Corvallis, OR (United States). Moelcular and Cellular Biology Program
  4. Oregon State Univ., Corvallis, OR (United States). Dept. of Botany and Plant Pathology
+ Show Author Affiliations
Nocardioides sp. strain CF8 was isolated from a soil sample collected at the Hanford Department of Energy site, Richland, WA. The strain was identified in microcosms based on its ability to grow on butane and has been characterized for its potential applications in the biodegradation of halogenated hydrocarbons. Here, the draft genome sequence is reported.
Research Organization:
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division
OSTI ID:
1629556
Journal Information:
Genome Announcements, Journal Name: Genome Announcements Journal Issue: 4 Vol. 1; ISSN 2169-8287
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (7)

Trichloroethylene degradation by butane-oxidizing bacteria causes a spectrum of toxic effects journal October 2005
Artemis: sequence visualization and annotation journal October 2000
Reordering contigs of draft genomes using the Mauve Aligner journal June 2009
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs journal February 2008
Isolation and characterization of alkane-utilizing Nocardioides sp. strain CF8 journal May 2000
The membrane-associated monooxygenase in the butane-oxidizing Gram-positive bacterium Nocardioides sp. strain CF8 is a novel member of the AMO/PMO family: pBMO in Nocardioides sp. strain CF8 journal January 2011
Chloroform Cometabolism by Butane-Grown CF8, Pseudomonas butanovora, and Mycobacterium vaccae JOB5 and Methane-Grown Methylosinus trichosporium OB3b journal September 1997

Cited By (2)

Genome-wide bioinformatics analysis of steroid metabolism-associated genes in Nocardioides simplex VKM Ac-2033D journal February 2016
Identification of genes coding for putative wax ester synthase/diacylglycerol acyltransferase enzymes in terrestrial and marine environments journal July 2015

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