Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1

Reeve, Wayne; Tian, Rui; De Meyer, Sofie; Melino, Vanessa; Terpolilli, Jason; Ardley, Julie; Tiwari, Ravi; Howieson, John; Yates, Ronald; O’Hara, Graham; Ninawi, Mohamed; Teshima, Hazuki; Bruce, David; Detter, Chris; Tapia, Roxanne; Han, Cliff; Wei, Chia-Lin; Huntemann, Marcel; Han, James; Chen, I-Min; Mavromatis, Konstantinos; Markowitz, Victor; Ivanova, Natalia; Ovchinnikova, Galina; Pagani, Ioanna; Pati, Amrita; Goodwin, Lynne; Pitluck, Sam; Woyke, Tanja; Kyrpides, Nikos

doi:10.4056/sigs.4488254

Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1

Journal Article · Sat Dec 14 23:00:00 EST 2013 · Standards in Genomic Sciences

DOI:https://doi.org/10.4056/sigs.4488254· OSTI ID:1628673

Reeve, Wayne ^[1]; Tian, Rui ^[2]; De Meyer, Sofie ^[2]; Melino, Vanessa ^[2]; Terpolilli, Jason ^[2]; Ardley, Julie ^[2]; Tiwari, Ravi ^[2]; Howieson, John ^[2]; Yates, Ronald ^[3]; O’Hara, Graham ^[2]; Ninawi, Mohamed ^[2]; Teshima, Hazuki ^[4]; Bruce, David ^[4]; Detter, Chris ^[4]; Tapia, Roxanne ^[4]; Han, Cliff ^[4]; Wei, Chia-Lin ^[4]; Huntemann, Marcel ^[4]; Han, James ^[4]; Chen, I-Min ^[5] more »

Murdoch Univ., WA (Australia). Centre for Rhizobium Studies; DOE/OSTI
Murdoch Univ., WA (Australia). Centre for Rhizobium Studies
Murdoch Univ., WA (Australia). Centre for Rhizobium Studies; Dept. of Agriculture and Food (Australia)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Biological Data Management and Technology Center
Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

Rhizobium leguminosarum bv. trifolii strain TA1 is an aerobic, motile, Gram-negative, nonspore-forming rod that is an effective nitrogen fixing microsymbiont on the perennial clovers originating from Europe and the Mediterranean basin. TA1 however is ineffective with many annual and perennial clovers originating from Africa and America. Here we describe the features of R. leguminosarum bv. trifolii strain TA1, together with genome sequence information and annotation. The 8,618,824 bp high-quality-draft genome is arranged in a 6 scaffold of 32 contigs, contains 8,493 protein-coding genes and 83 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program.

View Accepted Manuscript (DOE)

Research Organization:: Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States); Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division

Grant/Contract Number:: AC52-06NA25396; AC02-05CH11231; AC52-07NA27344

OSTI ID:: 1628673

Journal Information:: Standards in Genomic Sciences, Journal Name: Standards in Genomic Sciences Journal Issue: 2 Vol. 9; ISSN 1944-3277

Publisher:: BioMed CentralCopyright Statement

Country of Publication:: United States

Language:: English

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59 BASIC BIOLOGICAL SCIENCES
Alphaproteobacteria
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Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1

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References (45)

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