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Title: Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain SRDI943.

Journal Article · · Standards in Genomic Sciences
DOI:https://doi.org/10.4056/sigs.4478252· OSTI ID:1628672
 [1];  [2];  [2];  [1];  [1];  [1];  [3];  [1];  [4];  [5];  [5];  [6];  [5];  [5];  [5];  [5];  [5];  [6]
  1. Murdoch Univ., WA (Australia). Centre for Rhizobium Studies
  2. South Australian Research and Development Inst., Urrbrae (Australia)
  3. Deakin Univ., Melbourne, VIC (Australia). Faculty of Science and Technology. School of Life and Environmental Sciences
  4. Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Biosciences Division; USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
  5. Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Biosciences Division
  6. USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
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Rhizobium leguminosarum bv. trifolii SRDI943 (strain syn. V2-2) is an aerobic, motile, Gramnegative, non-spore-forming rod that was isolated from a root nodule of Trifolium michelianum Savi cv. Paradana that had been grown in soil collected from a mixed pasture in Victoria, Australia. This isolate was found to have a broad clover host range but was sub-optimal for nitrogen fixation with T. subterraneum (fixing 20-54% of reference inoculant strain WSM1325) and was found to be totally ineffective with the clover species T. polymorphum and T. pratense. Here we describe the features of R. leguminosarum bv. trifolii strain SRDI943, together with genome sequence information and annotation. The 7,412,387 bp high-quality-draft genome is arranged into 5 scaffolds of 5 contigs, contains 7,317 protein-coding genes and 89 RNA-only encoding genes, and is one of 100 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project.

Research Organization:
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States); Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States); Lawrence Livermore National Laboratory (LLNL), Livermore, CA (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division
Grant/Contract Number:
AC52-06NA25396; AC02-05CH11231; AC52-07NA27344
OSTI ID:
1628672
Journal Information:
Standards in Genomic Sciences, Vol. 9, Issue 2; ISSN 1944-3277
Publisher:
BioMed CentralCopyright Statement
Country of Publication:
United States
Language:
English

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Measurements of carbon utilization by single bacterial species in sterile soil: insights into Rhizobium spp. journal June 2016

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