A conserved His-Asp signal response regulator-like gene in Heterosigma akashiwo chloroplasts
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Complete Sequence and Analysis of Plastid Genomes of Two Economically Important Red Algae: Pyropia haitanensis and Pyropia yezoensis
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Erratum to: “Toc, Tic, and chloroplast protein import” [Biochim. Biophys. Acta 1541 (2001) 64–79]
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Complex repeat structures and novel features in the mitochondrial genomes of the diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana
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Genetic diversity of eukaryotic ultraphytoplankton in the Gulf of Naples during an annual cycle
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The Excess of Small Inverted Repeats in Prokaryotes
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Target and Specificity of a Nuclear Gene Product That Participates in mRNA 3′-End Formation in ChlamydomonasChloroplasts
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Genome-Based Reconstruction of the Protein Import Machinery in the Secondary Plastid of a Chlorarachniophyte Alga
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Stem-loop structures in prokaryotic genomes
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Fast and accurate short read alignment with Burrows-Wheeler transform
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RosettaLigand Docking with Full Ligand and Receptor Flexibility
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Improved microbial gene identification with GLIMMER
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The metal binding properties of the CCCH motif of the 50S ribosomal protein L36 from Thermus thermophilus: Authors' affiliations:
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Mauve: Multiple Alignment of Conserved Genomic Sequence With Rearrangements
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Stimulus Perception in Bacterial Signal-Transducing Histidine Kinases
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Chloroplast genome sequencing analysis of Heterosigma akashiwo CCMP452 (West Atlantic) and NIES293 (West Pacific) strains
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Protein import pathways in ?complex? chloroplasts derived from secondary endosymbiosis involving a red algal ancestor
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ProtTest: selection of best-fit models of protein evolution
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On the monophyly of chromalveolates using a six-protein phylogeny of eukaryotes
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Phylogenetic reconstructions of the Haptophyta inferred from 18S ribosomal DNA sequences and available morphological data
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Impact of Small Repeat Sequences on Bacterial Genome Evolution
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Phylogenomics reveals a new ‘megagroup’ including most photosynthetic eukaryotes
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Marine-Freshwater Colonizations of Haptophytes Inferred from Phylogeny of Environmental 18S rDNA Sequences: FRESHWATER HAPTOPHYTES
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EEF2 Analysis Challenges the Monophyly of Archaeplastida and Chromalveolata
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Plastids and Protein Targeting
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Primary Production of the Biosphere: Integrating Terrestrial and Oceanic Components
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Two-timing zinc finger transcription factors liaising with RNA
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Using Tablet for visual exploration of second-generation sequencing data
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The Complete Atomic Structure of the Large Ribosomal Subunit at 2.4 A Resolution
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Chloroplast genomes of the diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana: comparison with other plastid genomes of the red lineage
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Do Plastid-Related Characters Support the Chromalveolate Hypothesis?1: Chromalveolate Hypothesis
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Protein structure prediction and analysis using the Robetta server
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A HYPOTHESIS FOR PLASTID EVOLUTION IN CHROMALVEOLATES 1
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The Chloroplast Protein Translocation Complexes of Chlamydomonas reinhardtii : A Bioinformatic Comparison of Toc and Tic Components in Plants, Green Algae and Red Algae
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Protein secondary structure prediction based on position-specific scoring matrices 1 1Edited by G. Von Heijne
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Genome Erosion in a Nitrogen-Fixing Vertically Transmitted Endosymbiotic Multicellular Cyanobacterium
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The Complete Mitochondrial Genome Sequence of the Haptophyte Emiliania huxleyi and its Relation to Heterokonts
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3′-Processed mRNA Is Preferentially Translated in Chlamydomonas reinhardtii Chloroplasts
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Spatial variability of phytoplankton pigment distributions in the Subtropical South Pacific Ocean: comparison between in situ and predicted data
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A molecular clock for coccolithophores and implications for selectivity of phytoplankton extinctions across the K/T boundary
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Phylogenomic Evidence for Separate Acquisition of Plastids in Cryptophytes, Haptophytes, and Stramenopiles
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The Chloroplast Protein Import Machinery: A Review
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Heme b distributions through the Atlantic Ocean: evidence for “anemic” phytoplankton populations
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Bayesian Phylogenetics with BEAUti and the BEAST 1.7
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Chlorophyll c–Containing Plastid Relationships Based on Analyses of a Multigene Data Set with All Four Chromalveolate Lineages
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The evolutionary history of haptophytes and cryptophytes: phylogenomic evidence for separate origins
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Primary and Secondary Endosymbiosis and the Origin of Plastids
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Massive difference in synonymous substitution rates among mitochondrial, plastid, and nuclear genes of Phaeocystis algae
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Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton
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July 2010 |
A Greedy Algorithm for Aligning DNA Sequences
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Horizontal gene transfer of zinc and non-zinc forms of bacterial ribosomal protein S4
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Two-Component Signal Transduction
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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
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ROSETTALIGAND: Protein-small molecule docking with full side-chain flexibility
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The tree of eukaryotes
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Evolution of mitochondrial gene content: gene loss and transfer to the nucleus
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Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
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Protein Structure Prediction Using Rosetta
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The evolution of the plastid chromosome in land plants: gene content, gene order, gene function
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Zinc Fingers--Folds for Many Occasions
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December 2002 |
Morphological and genetic characterization of the first Isospora species (I. lugensae n. sp.) from a Kerguelen petrel (Lugensa brevirostris)
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January 2021 |
Extreme Reconfiguration of Plastid Genomes in the Angiosperm Family Geraniaceae: Rearrangements, Repeats, and Codon Usage
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August 2010 |
Structure prediction for CASP8 with all-atom refinement using Rosetta
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January 2009 |
Three old and one new: protein import into red algal-derived plastids surrounded by four membranes
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April 2013 |
New haptophyte lineages and multiple independent colonizations of freshwater ecosystems: New insights into haptophyte diversity
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January 2013 |
Chloroplast DNA rearrangements are more frequent when a large inverted repeat sequence is lost
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GenomeVx: simple web-based creation of editable circular chromosome maps
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Chrysochromulina sp.: A proposed lipid standard for the algal biofuel industry and its application to diverse taxa for screening lipid content
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October 2013 |
An exceptional horizontal gene transfer in plastids: gene replacement by a distant bacterial paralog and evidence that haptophyte and cryptophyte plastids are sisters
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Comparative genomics of bacterial zinc regulons: Enhanced ion transport, pathogenesis, and rearrangement of ribosomal proteins
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How Common Are Extraribosomal Functions of Ribosomal Proteins?
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Extreme diversity in noncalcifying haptophytes explains a major pigment paradox in open oceans
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A pangenomic analysis of the Nannochloropsis organellar genomes reveals novel genetic variations in key metabolic genes
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Using reliability information to annotate RNA secondary structures
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Phylogenetic relationships of the ‘golden algae’ (haptophytes, heterokont chromophytes) and their plastids
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Extensive Reorganization of the Plastid Genome of Trifolium subterraneum (Fabaceae) Is Associated with Numerous Repeated Sequences and Novel DNA Insertions
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Twenty-Fold Difference in Evolutionary Rates between the Mitochondrial and Plastid Genomes of Species with Secondary Red Plastids
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Genome sequencing in microfabricated high-density picolitre reactors
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The Negative Transcriptional Regulator NmrA Discriminates between Oxidized and Reduced Dinucleotides
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Extensive Rearrangements in the Chloroplast Genome of Trachelium caeruleum Are Associated with Repeats and tRNA Genes
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Avogadro: an advanced semantic chemical editor, visualization, and analysis platform
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Zinc-Responsive Regulation of Alternative Ribosomal Protein Genes in Streptomyces coelicolor Involves Zur and σR
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Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay
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After the primary endosymbiosis: an update on the chromalveolate hypothesis and the origins of algae with Chl c
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Nonlinear partial differential equations and applications: From the Cover: The single, ancient origin of chromist plastids
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Distribution, structure and diversity of “bacterial” genes encoding two-component proteins in the Euryarchaeota
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Transformation of chloroplast ribosomal RNA genes in Chlamydomonas: molecular and genetic characterization of integration events.
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Nitrogen metabolite repression of nitrate reductase in Neurospora crassa: effect of the gln-1a locus.
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Recombination within the inverted repeat sequences of the Chlamydomonas reinhardii chloroplast genome produces two orientation isomers
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Molecular and biological characterization of an isolate of the potyvirus passiflora virus Y naturally infecting soybean (Glycine max) in Brazil
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Identification of putative microRNAs in the complete genome of Mycobacterium avium and their possible interaction with human transcripts
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October 2021 |
Toc, Tic, and chloroplast protein import
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Processing and degradation of chloroplast mRNA
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Genetic basis for the establishment of endosymbiosis in Paramecium
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The Complete Mitochondrial Genome Sequence of the Haptophyte Emiliania huxleyi and its Relation to Heterokonts (Supplement)
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The Complete Plastid Genome Sequence of the Haptophyte Emiliania huxleyi: a Comparison to Other Plastid Genomes
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Characterization of the Aspergillus nidulans nmrA Gene Involved in Nitrogen Metabolite Repression
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