WHONDRS Summer 2019 Sampling Campaign: Global River Corridor Surface Water FTICR-MS, NPOC, TN, Anions, Stable Isotopes, Bacterial Abundance, and Dissolved Inorganic Carbon (v6)
- Pacific Northwest National Laboratory
- Ben Gurion University of the Negev
- Colorado State University
- University of Arizona/Pacific Northwest National Laboratory
The WHONDRS Summer 2019 Sampling (S19S) Campaign collected samples in 97 globally distributed river corridor systems between July and September 2019. Surficial streambed sediments were collected at three locations within each site (upstream, midstream, and downstream). Surface water was collected at the downstream site. This dataset includes a portion of the data types produced from the surface water samples and does not include any results from the sediment. Sediment data can be found at https://data.ess-dive.lbl.gov/view/doi:10.15485/1729719. Future datasets from this study will include hydrologic and microbial data from the surface water and sediment. The S19S campaign was designed with the science community to ask questions associated with links among core/transient metabolomes, microbial metabolism, biogeochemical function, and physical properties of watershed and river corridor systems. This dataset contains (1) high resolution characterization of dissolved organic matter from surface water via 12 Tesla Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS) through the Environmental Molecular Sciences Laboratory (EMSL; https://www.pnnl.gov/environmental-molecular-sciences-laboratory); (2) non-purgeable organic carbon (NPOC); (3) stable water isotopes (O and H); (4) specific conductivity (SpC), total nitrogen (TN), and anions; (5) flow cytometry bacterial abundance data; (6) dissolved inorganic carbon (DIC) data; (7) metadata, including international generic-sample number (IGSN) mapping file; (8) file-level metadata (flmd); and (9) data dictionary (dd). The FTICR-MS files are .xml, and the data package includes instructions for using Formularity (https://omics.pnl.gov/software/formularity) and an R script to process the data based on the user’s specific needs. All other files are .csv, .pdf, or .txt. This data package was updated in July 2021 to add SpC, TN, and anion data and accompanying documentation. This data package was updated in January 2023 to add flow cytometry bacterial data, accompanying documentation, flmd, and dd. The data package was updated in February 2023 to add DIC data and accompanying documentation. The data package was updated in August 2023 to add IGSN mapping file, correct field metadata, and update accompanying documentation. See change history in readme for details.Please use the data package’s DOI to cite the data package. We ask that you email us at WHONDRS@pnnl.gov to let us know that you are using the data and acknowledge WHONDRS and the U.S. Department of Energy's Environmental System Science program—which generously provides funding to WHONDRS—in your publications, proposals, presentations, etc. All data are free to be used for any purpose, such as for manuscripts, presentations, and grant proposals. There is no obligation to include WHONDRS members as co-authors.
- Research Organization:
- Environmental System Science Data Infrastructure for a Virtual Ecosystem (ESS-DIVE) (United States); River Corridor and Watershed Biogeochemistry SFA
- Sponsoring Organization:
- U.S. DOE > Office of Science > Biological and Environmental Research (BER)
- OSTI ID:
- 1603775
- Country of Publication:
- United States
- Language:
- English
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Related Subjects
WHONDRS
Watershed
River corridor
Hydrology
Biogeochemistry
Hyporheic zone
Hydrologic exchange
River
Stream
Carbon
FTICR
Metabolite
Metabolomics
Mass spectrometry
Catchment
Microbiome
Isotope geochemistry
Freshwater
Organic matter
Flow cytometry
ESS-DIVE CSV File Formatting Guidelines Reporting Format
ESS-DIVE File Level Metadata Reporting Format
ESS-DIVE Sample ID and Metadata Reporting Format
EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > SURFACE WATER
FTICR-MS
Deuterium
18-O
NPOC
Total nitrogen
Specific conductance
Chloride
Sulfate
Nitrate
Nitrite
Fluoride
Anions
Bacterial abundance
Dissolved inorganic carbon
DIC
EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > WATER QUALITY/WATER CHEMISTRY > ISOTOPES > STABLE ISOTOPES