skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Nuclear Genome Assembly of the Microalga Nannochloropsis salina CCMP1776

Journal Article · · Microbiology Resource Announcements
DOI:https://doi.org/10.1128/MRA.00750-19· OSTI ID:1572429

Nannochloropsis salina is a halotolerant, high-lipid-producing microalga that is being explored as a biofuel production species. Here, we report an improved high-quality draft assembly and annotation for the nuclear genome of N. salina strain CCMP1776.

Sponsoring Organization:
USDOE
Grant/Contract Number:
NL0029949; EE0003046
OSTI ID:
1572429
Journal Information:
Microbiology Resource Announcements, Journal Name: Microbiology Resource Announcements Vol. 8 Journal Issue: 44; ISSN 2576-098X
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (16)

InterProScan 5: genome-scale protein function classification journal January 2014
BRAKER1: Unsupervised RNA-Seq-Based Genome Annotation with GeneMark-ET and AUGUSTUS: Table 1. journal November 2015
Genomic insights from the oleaginous model alga Nannochloropsis gaditana journal January 2013
Notes on the taxonomy and nomenclature of the algal classes Eustigmatophyceae and Tribophyceae (synonym Xanthophyceae) journal February 1981
Genome sequencing in microfabricated high-density picolitre reactors journal July 2005
The effect of light, salinity, and nitrogen availability on lipid production by Nannochloropsis sp. journal March 2011
Reconstruction of the microalga Nannochloropsis salina genome-scale metabolic model with applications to lipid production journal July 2017
Lipid and biomass production by the halotolerant microalga Nannochloropsis salina journal January 1987
Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropsis gaditana journal January 2012
Microalgae for oil: Strain selection, induction of lipid synthesis and outdoor mass cultivation in a low-cost photobioreactor journal January 2009
High-efficiency homologous recombination in the oil-producing alga Nannochloropsis sp. journal November 2011
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs journal February 2008
UniProt: the universal protein knowledgebase journal February 2018
Growth aspects of the marine microalga Nannochloropsis gaditana journal July 2003
Production of cell mass and eicosapentaenoic acid (EPA) in ultrahigh cell density cultures of Nannochloropsis sp. (Eustigmatophyceae) journal May 2000
Solexa Ltd journal June 2004

Related Subjects