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Genome Sequence of a Staphylococcus xylosus Clinical Isolate, Strain SMA0341-04 (UGA5), from Siaya County Referral Hospital in Siaya, Kenya

Journal Article · · Microbiology Resource Announcements
DOI:https://doi.org/10.1128/MRA.01625-18· OSTI ID:1507452
 [1];  [2];  [2];  [2];  [2];  [3];  [4];  [1];  [5];  [6];  [2];  [3];  [1];  [4];
  1. Center for Global Health, Department of Internal Medicine, University of New Mexico Health Sciences Center, Albuquerque, New Mexico, USA
  2. Biosecurity and Public Health, Bioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA
  3. Theoretical Biology and Biophysics, Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA
  4. Physical Chemistry and Applied Spectroscopy, Chemistry Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA
  5. University of New Mexico Laboratories of Parasitic and Viral Diseases, Kisumu, Kenya
  6. Department of Medical Laboratory Sciences, School of Public Health, Biomedical Sciences and Technology, Masinde Muliro University of Science and Technology, Kakamega, Kenya
+ Show Author Affiliations

We report here the genome sequence of a Staphylococcus xylosus clinical isolate, strain SMA0341-04 (UGA5), which contains one chromosome and at least one plasmid. Notably, strain SMA0341-04 (UGA5) contains the tetracycline efflux major facilitator superfamily (MFS) transporter ( tetK ) gene.

Sponsoring Organization:
USDOE
OSTI ID:
1507452
Journal Information:
Microbiology Resource Announcements, Journal Name: Microbiology Resource Announcements Journal Issue: 16 Vol. 8; ISSN 2576-098X
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (21)

Multiresistance of Staphylococcus xylosus and Staphylococcus equorum from Slovak Bryndza cheese journal October 2013
Antibiotic resistance patterns of coagulase-negative staphylococcus strains isolated from blood cultures of septicemic patients in Turkey journal January 2009
Fast and accurate short read alignment with Burrows-Wheeler transform journal May 2009
An Ergatis-based prokaryotic genome annotation web server journal March 2010
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth journal April 2012
Isolation and Characterization of Staphylococci from Human Skin I. Amended Descriptions of Staphylococcus epidermidis and Staphylococcus saprophyticus and Descriptions of Three New Species: Staphylococcus cohnii, Staphylococcus haemolyticus, and Staphylococcus xylosus journal January 1975
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs journal February 2008
Base-Calling of Automated Sequencer Traces Using Phred.  I. Accuracy Assessment journal March 1998
Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities journal March 1998
Consed: A Graphical Tool for Sequence Finishing journal March 1998
Identification of Staphylococcus xylosus Isolated from C57BL/6J- Nos2 tm1Lau Mice with Dermatitis journal September 2002
Microbiological profile in Serra ewes' cheese during ripening journal July 1995
Staphylococcus epidermidis And Staphylococcus xylosus In A Secondary Root Canal Infection With Persistent Symptoms: A Case Report journal August 2002
Acute Pyelonephritis Caused by Staphylococcus xylosus journal January 1982
Identification and antibiotic susceptibility of coagulase negative staphylococci isolated in corneal/external infections journal July 1999
The RAST Server: Rapid Annotations using Subsystems Technology journal January 2008
Rapid evaluation and quality control of next generation sequencing data with FaQCs journal November 2014
Isolation and Species Distribution of Staphylococci from Animal and Human Skin journal January 2002
Pebble and Rock Band: Heuristic Resolution of Repeats and Scaffolding in the Velvet Short-Read de Novo Assembler journal December 2009
Viability of Staphylococcus xylosus isolated from artisanal sausages for application as starter cultures in meat products journal January 2009
Coagulase-negative staphylococci (CNS) as an aetiological factor of mastitis in cows journal September 2013

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