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Title: Mechanism and Regulation of DNA-Protein Crosslink Repair by the DNA-Dependent Metalloprotease SPRTN

Journal Article · · Molecular Cell

Covalent DNA-protein crosslinks (DPCs) are toxic DNA lesions that interfere with essential chromatin transactions, such as replication and transcription. Little was known about DPC-specific repair mechanisms until the recent identification of a DPC-processing protease in yeast. The existence of a DPC protease in higher eukaryotes is inferred from data in Xenopus laevis egg extracts, but its identity remains elusive. Here we identify the metalloprotease SPRTN as the DPC protease acting in metazoans. Loss of SPRTN results in failure to repair DPCs and hypersensitivity to DPC-inducing agents. SPRTN accomplishes DPC processing through a unique DNA-induced protease activity, which is controlled by several sophisticated regulatory mechanisms. Cellular, biochemical, and structural studies define a DNA switch triggering its protease activity, a ubiquitin switch controlling SPRTN chromatin accessibility, and regulatory autocatalytic cleavage. Our data also provide a molecular explanation on how SPRTN deficiency causes the premature aging and cancer predisposition disorder Ruijs-Aalfs syndrome.

Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
USDOE Office of Science (SC)
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
1402386
Alternate ID(s):
OSTI ID: 1379586
Journal Information:
Molecular Cell, Journal Name: Molecular Cell Vol. 64 Journal Issue: 4; ISSN 1097-2765
Publisher:
ElsevierCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 129 works
Citation information provided by
Web of Science

Cited By (14)

The role of ubiquitin-dependent segregase p97 (VCP or Cdc48) in chromatin dynamics after DNA double strand breaks journal August 2017
Reversible DNA-Protein Cross-Linking at Epigenetic DNA Marks journal October 2017
Genetic investigation of formaldehyde-induced DNA damage response in Schizosaccharomyces pombe journal February 2020
Mechanisms of DNA–protein crosslink repair journal June 2017
How formaldehyde reacts with amino acids journal November 2019
Error-prone replication of a 5-formylcytosine-mediated DNA-peptide cross-link in human cells journal May 2019
Spartan deficiency causes accumulation of Topoisomerase 1 cleavage complexes and tumorigenesis journal February 2017
Conditional degradation of SDE2 by the Arg/N-End rule pathway regulates stress response at replication forks journal January 2019
Dihydropyrimidinase protects from DNA replication stress caused by cytotoxic metabolites journal December 2019
DNA–protein cross-link repair: what do we know now? journal January 2020
Topoisomerases and cancer chemotherapy: recent advances and unanswered questions journal January 2019
Variable termination sites of DNA polymerases encountering a DNA–protein cross-link journal June 2018
SUMO ylation promotes protective responses to DNA ‐protein crosslinks journal March 2019
DNA- and DNA-Protein-Crosslink Repair in Plants journal September 2019

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