Skip to main content
U.S. Department of Energy
Office of Scientific and Technical Information

X-ray circular dichroism signals: a unique probe of local molecular chirality

Journal Article · · Chemical Science
DOI:https://doi.org/10.1039/c7sc01347g· OSTI ID:1390446
 [1];  [1];  [2];  [3];  [1]
  1. Univ. of California, Irvine, CA (United States)
  2. Univ. at Buffalo, State Univ. of New York, Buffalo, NY (United States)
  3. Pacific Northwest National Lab. (PNNL), Richland, WA (United States)
Core-resonant circular dichroism (CD) signals are induced by molecular chirality and vanish for achiral molecules and racemic mixtures. The highly localized nature of core excitations makes them ideal probes of local chirality within molecules. Simulations of the circular dichroism spectra of several molecular families illustrate how these signals vary with the electronic coupling to substitution groups, the distance between the X-ray chromophore and the chiral center, geometry, and chemical structure. As a result, clear insight into the molecular structure is obtained through analysis of the X-ray CD spectra.
Research Organization:
Pacific Northwest National Laboratory (PNNL), Richland, WA (United States). Environmental Molecular Sciences Laboratory (EMSL)
Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES) (SC-22)
Grant/Contract Number:
AC05-76RL01830
OSTI ID:
1390446
Report Number(s):
PNNL-SA--125728; 49640; KC0301050
Journal Information:
Chemical Science, Journal Name: Chemical Science Journal Issue: 9 Vol. 8; ISSN 2041-6520; ISSN CSHCBM
Publisher:
Royal Society of ChemistryCopyright Statement
Country of Publication:
United States
Language:
English

References (76)

Theoretical CD spectrum calculations of the crown-ether aralkyl-ammonium salt complex: Theoretical CD of a Host-Guest Complex journal January 2002
On circular dichroism and the separation between chromophore and chiral center: The near carbon K-edge X-ray absorption and circular dichroism spectra of noradrenaline and L-DOPA journal January 2009
Computing chiroptical properties with first-principles theoretical methods: Background and illustrative examples journal January 2009
Time-Dependent Density Functional Theory for Calculating Origin-Independent Optical Rotation and Rotatory Strength Tensors journal September 2011
Helicene Chemistry: From Synthesis to Applications book January 2017
Direct SCF direct static-exchange calculations of electronic spectra
  • �gren, Hans; Carravetta, Vincenzo; Vahtras, Olav
  • Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta), Vol. 97, Issue 1-4 https://doi.org/10.1007/s002140050234
journal October 1997
Excited States of H2O using improved virtual orbitals journal June 1969
Direct, atomic orbital, static exchange calculations of photoabsorption spectra of large molecules and clusters journal May 1994
Random phase approximation calculations of K-edge rotational strengths of chiral molecules: propylene oxide journal July 1994
Characterization of the electronic structure of SiCl4 probed by X-ray absorption and ion desorption techniques journal November 1995
Analyses for a planar variably-polarizing undulator journal August 1994
Density functional calculations of excitation energies and oscillator strengths for and excitations and ionization potentials in carbonyl containing molecules journal February 1995
Time dependent density functional theory of core electrons excitations journal May 2003
Ordinary and rotatory intensities for X-ray absorption at the C-1s edge of organic chiral molecules: propylene oxide and trans-1,2-dimethylcyclopropane journal August 1997
Time-dependent density functional theory within the Tamm–Dancoff approximation journal December 1999
Theoretical study of X-ray circular dichroism of amino acids journal June 1998
X-ray magnetic circular dichroism—A versatile tool to study magnetism journal October 2014
Theoretical study of the X-ray natural circular dichroism of some crystalline amino acids journal April 2015
NWChem: A comprehensive and scalable open-source solution for large scale molecular simulations journal September 2010
Time-dependent density functional calculations of ligand K-edge X-ray absorption spectra journal March 2008
Density Matrix Analysis and Simulation of Electronic Excitations in Conjugated and Aggregated Molecules journal September 2002
Modeling Fast Electron Dynamics with Real-Time Time-Dependent Density Functional Theory: Application to Small Molecules and Chromophores journal April 2011
Energy-Specific Linear Response TDHF/TDDFT for Calculating High-Energy Excited States journal October 2011
Linear-Response and Real-Time Time-Dependent Density Functional Theory Studies of Core-Level Near-Edge X-Ray Absorption journal August 2012
Efficient Calculations of Molecular Linear Response Properties for Spectral Regions journal May 2014
Comparison of Real-Time and Linear-Response Time-Dependent Density Functional Theories for Molecular Chromophores Ranging from Sparse to High Densities of States journal February 2015
Ab Initio Calculation of Vibrational Absorption and Circular Dichroism Spectra Using Density Functional Force Fields journal November 1994
Core Electron Transitions as a Probe for Molecular Chirality:  Natural Circular Dichroism at the Carbon K-edge of Methyloxirane journal April 2004
Circular Dichroism at the Edge:  Large X-ray Natural CD in the 1s → 3d Pre-Edge Feature of 2[Co(en) 3 Cl 3 ]·NaCl·6H 2 O journal November 1999
Time-Dependent Density Functional Theory Study of the X-ray Absorption Spectroscopy of Acetylene, Ethylene, and Benzene on Si(100) journal January 2007
Femtosecond characterization of vibrational optical activity of chiral molecules journal March 2009
The generation, characterization and applications of broadband isolated attosecond pulses journal February 2014
X-ray two-photon absorption competing against single and sequential multiphoton processes journal February 2014
Observation of high-order harmonic generation in a bulk crystal journal December 2010
K- and L-edge X-ray absorption spectrum calculations of closed-shell carbon, silicon, germanium, and sulfur compounds using damped four-component density functional response theory journal January 2016
Non-local real-space analysis of chiral optical signals journal January 2016
Parameter-free calculations of X-ray spectra with FEFF9 journal January 2010
Near-resonant absorption in the time-dependent self-consistent field and multiconfigurational self-consistent field approximations journal January 2001
Calculating molecular electric and magnetic properties from time-dependent density functional response theory journal January 2002
Chiroptical properties from time-dependent density functional theory. I. Circular dichroism spectra of organic molecules journal April 2002
Finite lifetime effects on the polarizability within time-dependent density-functional theory journal June 2005
Nonlinear response theory with relaxation: The first-order hyperpolarizability journal November 2005
Calculation of K-edge circular dichroism of amino acids: Comparison of random phase approximation with other methods journal June 2007
Near-edge x-ray absorption and natural circular dichroism spectra of L-alanine: A theoretical study based on the complex polarization propagator approach journal October 2007
X-ray absorption and natural circular dichroism spectra of C84: A theoretical study using the complex polarization propagator approach journal June 2008
Self‐consistent molecular orbital methods. XX. A basis set for correlated wave functions journal January 1980
Contracted Gaussian basis sets for molecular calculations. I. Second row atoms, Z=11–18 journal May 1980
Gaussian basis sets for use in correlated molecular calculations. I. The atoms boron through neon and hydrogen journal January 1989
Gaussian basis sets for use in correlated molecular calculations. III. The atoms aluminum through argon journal January 1993
Density‐functional thermochemistry. III. The role of exact exchange journal April 1993
Two-dimensional stimulated resonance Raman spectroscopy of molecules with broadband x-ray pulses journal May 2012
X-ray natural circular dichroism in a uniaxial gyrotropic single crystal of LiIO3 journal April 1998
Core and valence excitations in resonant X-ray spectroscopy using restricted excitation window time-dependent density functional theory journal November 2012
Gaussian basis sets for use in correlated molecular calculations. IX. The atoms gallium through krypton journal April 1999
Femtosecond X-ray magnetic circular dichroism absorption spectroscopy at an X-ray free electron laser journal March 2016
An atomic orbital based real-time time-dependent density functional theory for computing electronic circular dichroism band spectra journal June 2016
Photoinduced molecular chirality probed by ultrafast resonant X-ray spectroscopy journal July 2017
Bright circularly polarized soft X-ray high harmonics for X-ray magnetic circular dichroism journal November 2015
Understanding excitation energy transfer in metalloporphyrin heterodimers with different linkers, bonding structures, and geometries through stimulated X-ray Raman spectroscopy journal March 2014
Natural circular dichroism in non-resonant x-ray emission journal March 1997
Determination of multiwavelength anomalous diffraction coefficients at high x-ray intensity journal August 2013
Correlation Effects in Atomic Structure Using the Random-Phase Approximation journal February 1964
Non-Adiabatic Meson Theory of Nuclear Forces journal May 1950
Application of the time-dependent local density approximation to optical activity journal August 1999
Schemes for generation of isolated attosecond pulses of pure circular polarization journal April 2016
Calculations of near-edge x-ray-absorption spectra of gas-phase and chemisorbed molecules by means of density-functional and transition-potential theory journal September 1998
Optical Chirality and Its Interaction with Matter journal April 2010
Single-Shot Electronic Optical Activity Interferometry: Power and Phase Fluctuation-Free Measurement journal March 2012
Density-Functional Theory for Time-Dependent Systems journal March 1984
X-Ray Natural Circular Dichroism journal May 1998
Polarization Propagator for X-Ray Spectra journal October 2006
Generation of attosecond x-ray pulses with a multicycle two-color enhanced self-amplified spontaneous emission scheme journal June 2009
Helios: a New Type of Linear/Helical Undulator journal October 1994
Element-Specific Magnetic Microscopy with Circularly Polarized X-rays journal January 1993
High-Resolution Spectroscopic Studies and Theory of Parity Violation in Chiral Molecules journal May 2008
First Observation of Natural Circular Dichroism for Biomolecules in SofXray Region Studied with a Polarizing Undulator journal January 2005

Cited By (3)

X-ray Raman optical activity of chiral molecules journal January 2019
Strong-field control and enhancement of chiral response in bi-elliptical high-order harmonic generation: an analytical model journal May 2018
Angular streaking in strong field ionization of chiral molecules journal October 2019

Similar Records

Metal-Organic Frameworks with Achiral/Monochiral Nano-channels
Journal Article · Fri Jul 01 04:00:00 UTC 2011 · Crystal Growth & Design, 11(7):2824-2828 · OSTI ID:1021834

DNA-Enabled Chiral Gold Nanoparticle–Chromophore Hybrid Structure with Resonant Plasmon–Exciton Coupling Gives Unusual and Strong Circular Dichroism
Journal Article · Thu Nov 14 00:00:00 UTC 2019 · Journal of the American Chemical Society · OSTI ID:1596647