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Title: Time dependent genetic analysis links field and controlled environment phenotypes in the model C4 grass Setaria

Journal Article · · PLoS Genetics

Research Organization:
Donald Danforth Plant Science Center, St. Louis, MO (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division; USDA Agricultural Research Service (ARS)
Grant/Contract Number:
SC0008769
OSTI ID:
1369107
Alternate ID(s):
OSTI ID: 1365607; OSTI ID: 1423881
Journal Information:
PLoS Genetics, Journal Name: PLoS Genetics Vol. 13 Journal Issue: 6; ISSN 1553-7404
Publisher:
Public Library of Science (PLoS)Copyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 32 works
Citation information provided by
Web of Science

References (66)

Advances in the genetic dissection of plant cell walls: tools and resources available in Miscanthus journal January 2013
A Proposal Regarding Best Practices for Validating the Identity of Genetic Stocks and the Effects of Genetic Variants journal March 2016
Loss of an MDR Transporter in Compact Stalks of Maize br2 and Sorghum dw3 Mutants journal October 2003
A Versatile Phenotyping System and Analytics Platform Reveals Diverse Temporal Responses to Water Availability in Setaria journal October 2015
TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline journal February 2014
Genetic Variability and Trait Relationships in Switchgrass journal January 2004
Development and Genetic Control of Plant Architecture and Biomass in the Panicoid Grass, Setaria journal March 2016
Comparative analysis of QTLs affecting plant height and flowering among closely-related diploid and polyploid genomes journal October 2002
Setaria viridis : A Model for C 4 Photosynthesis journal August 2010
Maize DELLA Proteins dwarf plant8 and dwarf plant9 as Modulators of Plant Development journal October 2010
Semidwarf (sd-1), "green revolution" rice, contains a defective gibberellin 20-oxidase gene journal June 2002
Plant height and evolutionary games journal July 2003
The Maize DWARF1 Encodes a Gibberellin 3-Oxidase and Is Dual Localized to the Nucleus and Cytosol journal October 2014
delayed flowering1 Encodes a Basic Leucine Zipper Protein That Mediates Floral Inductive Signals at the Shoot Apex in Maize journal October 2006
Construction of RFLP-based maps of foxtail millet, Setaria italica (L.) P. Beauv. journal January 1998
R/qtl: QTL mapping in experimental crosses journal May 2003
On the Adaptive Significance of Leaf Height in Forest Herbs journal September 1982
Genetic analysis of drought tolerance in maize by molecular markers. II. Plant height and flowering journal July 1999
Comparative analysis of QTLs affecting plant height and maturity across the Poaceae, in reference to an interspecific sorghum population. journal September 1995
‘Green revolution’ genes encode mutant gibberellin response modulators journal July 1999
Genetic resolution and verification of quantitative trait loci for flowering and plant height with recombinant inbred lines of maize journal October 1996
THE BIOLOGY OF CANADIAN WEEDS.: 70. Setaria viridis (L.) Beauv. journal July 1985
Identification of Dw1, a Regulator of Sorghum Stem Internode Length journal March 2016
Fitting Linear Mixed-Effects Models Using lme4 journal January 2015
Plant-plant signalling, the shade-avoidance response and competition journal November 1999
Mapping Quantitative Trait Loci Underlying Function-Valued Traits Using Functional Principal Component Analysis and Multi-Trait Mapping journal November 2015
Association of quantitative trait loci for plant height with major dwarfing genes in rice journal August 1996
The indeterminate Gene Encodes a Zinc Finger Protein and Regulates a Leaf-Generated Signal Required for the Transition to Flowering in Maize journal May 1998
A Review on Miscanthus Biomass Production and Composition for Bioenergy Use: Genotypic and Environmental Variability and Implications for Breeding journal September 2014
A Dwarf Mutant of Arabidopsis Generated by T-DNA Insertion Mutagenesis journal March 1989
The Development of Plant-To-Plant Variability in Maize at Different Planting Densities journal July 1979
The Tangled1 Gene Is Required for Spatial Control of Cytoskeletal Arrays Associated with Cell Division during Maize Leaf Development journal November 1998
High-Throughput Computer Vision Introduces the Time Axis to a Quantitative Trait Map of a Plant Growth Response journal August 2013
Mapping dynamic QTL for plant height in triticale journal January 2014
Cloning Knotted, the dominant morphological mutant in maize using Ds2 as a transposon tag journal January 1989
A fortunate choice: the history of Arabidopsis as a model plant journal November 2002
Finding and Comparing Syntenic Regions among Arabidopsis and the Outgroups Papaya, Poplar, and Grape: CoGe with Rosids journal October 2008
Quantitative trait loci for plant height in four maize populations and their associations with qualitative genetic loci journal December 1991
Rapid isolation of high molecular weight plant DNA journal January 1980
Fast gapped-read alignment with Bowtie 2 journal March 2012
A Tandem Array of ent -Kaurene Synthases in Maize with Roles in Gibberellin and More Specialized Metabolism journal November 2015
Comparative genetic maps of foxtail millet (Setaria italica) and rice (Oryza sativa) journal January 1998
Genetic Control and Comparative Genomic Analysis of Flowering Time in Setaria (Poaceae) journal February 2013
Cloning and characterization of the maize An1 gene. journal January 1995
Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach journal February 2012
Rice gibberellin-insensitive dwarf mutant gene Dwarf 1 encodes the alpha -subunit of GTP-binding protein journal August 1999
Reference genome sequence of the model plant Setaria journal May 2012
Genotype-by-Environment Interaction and Plasticity: Exploring Genomic Responses of Plants to the Abiotic Environment journal November 2013
The ecological significance of long-distance water transport: short-term regulation, long-term acclimation and the hydraulic costs of stature across plant life forms journal January 2003
Genetic Insight into Yield-Associated Traits of Wheat Grown in Multiple Rain-Fed Environments journal February 2012
Brd1 Gene in Maize Encodes a Brassinosteroid C-6 Oxidase journal January 2012
The Genetic Architecture Of Maize Height journal February 2014
Cloning of a Mutable bz2 Allele of Maize by Transposon Tagging and Differential Hybridization journal December 1987
The maize Dwarf3 gene encodes a cytochrome P450-mediated early step in Gibberellin biosynthesis. journal August 1995
RISING ATMOSPHERIC CARBON DIOXIDE: Plants FACE the Future journal June 2004
Population genetics of Setaria viridis , a new model system journal September 2014
Phenomics – technologies to relieve the phenotyping bottleneck journal December 2011
Molecular Dissection of Developmental Behavior of Plant Height in Rice (Oryza sativa L.) journal November 1998
Brachypodium distachyon and Setaria viridis : Model Genetic Systems for the Grasses journal April 2015
How to fit nonlinear plant growth models and calculate growth rates: an update for ecologists: Nonlinear plant growth models journal September 2011
High-Throughput Phenotyping to Detect Drought Tolerance QTL in Wild Barley Introgression Lines journal May 2014
From dwarves to giants? Plant height manipulation for biomass yield journal August 2009
Brassinosteroid control of sex determination in maize journal November 2011
The Maize Viviparous8 Locus, Encoding a Putative ALTERED MERISTEM PROGRAM1-Like Peptidase, Regulates Abscisic Acid Accumulation and Coordinates Embryo and Endosperm Development journal January 2008
Yield Components of Biomass in Switchgrass journal January 2008
Characterization and Fine Mapping of ( ) in Foxtail Millet journal January 2016