Plant immunophilins: a review of their structure-function relationship

Vasudevan, Dileep; Gopalan, Gayathri; Kumar, Ashish; Garcia, Veder J.; Luan, Sheng; Swaminathan, Kunchithapadam

doi:10.1016/j.bbagen.2014.12.017

Plant immunophilins: a review of their structure-function relationship

Journal Article · Thu Oct 01 00:00:00 EDT 2015 · Biochimica et Biophysica Acta - General Subjects

DOI:https://doi.org/10.1016/j.bbagen.2014.12.017· OSTI ID:1342594

Vasudevan, Dileep; Gopalan, Gayathri; Kumar, Ashish; Garcia, Veder J.; Luan, Sheng; Swaminathan, Kunchithapadam

Not Available

View Accepted Manuscript (Publisher)

Sponsoring Organization:: USDOE

OSTI ID:: 1342594

Journal Information:: Biochimica et Biophysica Acta - General Subjects, Journal Name: Biochimica et Biophysica Acta - General Subjects Journal Issue: 10 Vol. 1850; ISSN 0304-4165

Publisher:: ElsevierCopyright Statement

Country of Publication:: Netherlands

Language:: English

References (145)

Structural comparison of oxidized and reduced FKBP13 from Arabidopsis thaliana Gopalan, Gayathri; He, Zengyong; Battaile, Kevin P. Proteins: Structure, Function, and Bioinformatics, Vol. 65, Issue 4 https://doi.org/10.1002/prot.21108	journal	October 2006
Structure-based classification of 45 FK506-binding proteins: Tertiary Structures of FKBPs Somarelli, J. A.; Lee, S. Y.; Skolnick, J. Proteins: Structure, Function, and Bioinformatics, Vol. 72, Issue 1 https://doi.org/10.1002/prot.21908	journal	January 2008
Variations of Sequences and Amino Acid Compositions of Proteins That Sustain Their Biological Functions: An Analysis of the Cyclophilin Family of Proteins Galat, Andrzej Archives of Biochemistry and Biophysics, Vol. 371, Issue 2 https://doi.org/10.1006/abbi.1999.1434	journal	November 1999
X-ray Structure of a Monomeric Cyclophilin A-Cyclosporin A Crystal Complex at 2·1 Å Resolution Mikol, Vincent; Kallen, Jörg; Pflügl, Gaston Journal of Molecular Biology, Vol. 234, Issue 4 https://doi.org/10.1006/jmbi.1993.1664	journal	December 1993
The three-dimensional structure of a Plasmodium falciparum cyclophilin in complex with the potent anti-malarial cyclosporin A Peterson, Mark R.; Hall, David R.; Berriman, Matthew Journal of Molecular Biology, Vol. 298, Issue 1 https://doi.org/10.1006/jmbi.2000.3633	journal	April 2000
A novel plant peptidyl-prolyl-cis-trans-isomerase (PPIase): cDNA cloning, structural analysis, enzymatic activity and expression Blecher, Oshra; Erel, Noa; Callebaut, Isabelle Plant Molecular Biology, Vol. 32, Issue 3 https://doi.org/10.1007/BF00019101	journal	November 1996
Ectopic expression of ThCYP1, a stress-responsive cyclophilin gene from Thellungiella halophila, confers salt tolerance in fission yeast and tobacco cells Chen, An-Ping; Wang, Gui-Ling; Qu, Zhan-Liang Plant Cell Reports, Vol. 26, Issue 2 https://doi.org/10.1007/s00299-006-0238-y	journal	September 2006
The rice thylakoid lumenal cyclophilin OsCYP20-2 confers enhanced environmental stress tolerance in tobacco and Arabidopsis Kim, Se-Kyong; You, Young Nim; Park, Jong Chun Plant Cell Reports, Vol. 31, Issue 2 https://doi.org/10.1007/s00299-011-1176-x	journal	October 2011
Wheat FKBP73 functions in vitro as a molecular chaperone independently of its peptidyl prolyl cis - trans isomerase activity Kurek, Isaac; Pirkl, Franziska; Fischer, Elke Planta, Vol. 215, Issue 1 https://doi.org/10.1007/s00425-001-0722-0	journal	May 2002
A maize FK506-sensitive immunophilin, mzFKBP-66, is a peptidylproline cis - trans -isomerase that interacts with calmodulin and a 36-kDa cytoplasmic protein Hueros, Gregorio; Rahfeld, Jens; Salamini, Francesco Planta, Vol. 205, Issue 1 https://doi.org/10.1007/s004250050303	journal	April 1998
SUMO-conjugating enzyme (Sce) and FK506-binding protein (FKBP) encoding rice (Oryza sativa L.) genes: genome-wide analysis, expression studies and evidence for their involvement in abiotic stress response Nigam, Neha; Singh, Amanjot; Sahi, Chandan Molecular Genetics and Genomics, Vol. 279, Issue 4 https://doi.org/10.1007/s00438-008-0318-5	journal	January 2008
Mutations in a new Arabidopsis cyclophilin disrupt its interaction with protein phosphatase 2A Jackson, K.; Söll, D. Molecular and General Genetics MGG, Vol. 262, Issue 4-5 https://doi.org/10.1007/s004380051147	journal	December 1999
Crystal structure of the three FK506 binding protein domains of wheat FKBP73: evidence for a unique wFK73_2 domain Unger, Tamar; Dym, Orly; Albeck, Shira Journal of Structural and Functional Genomics, Vol. 11, Issue 2 https://doi.org/10.1007/s10969-010-9085-8	journal	March 2010
Arabidopsis immunophilins ROF1 (AtFKBP62) and ROF2 (AtFKBP65) exhibit tissue specificity, are heat-stress induced, and bind HSP90 Aviezer-Hagai, Keren; Skovorodnikova, Julia; Galigniana, Mario Plant Molecular Biology, Vol. 63, Issue 2 https://doi.org/10.1007/s11103-006-9085-z	journal	November 2006
Involvement of Arabidopsis ROF2 (FKBP65) in thermotolerance Meiri, David; Tazat, Keren; Cohen-Peer, Reut Plant Molecular Biology, Vol. 72, Issue 1-2 https://doi.org/10.1007/s11103-009-9561-3	journal	October 2009
Differential gene expression in Arachis diogoi upon interaction with peanut late leaf spot pathogen, Phaeoisariopsis personata and characterization of a pathogen induced cyclophilin Kumar, Koppolu Raja Rajesh; Kirti, Pulugurtha Bharadwaja Plant Molecular Biology, Vol. 75, Issue 4-5 https://doi.org/10.1007/s11103-011-9747-3	journal	February 2011
Confirmation of the existence of a third family among peptidyl-prolyl cis/trans isomerases Amino acid sequence and recombinant production of parvulin Rahfeld, Jens-U.; Rücknagel, Karl Peter; Schelbert, Birte FEBS Letters, Vol. 352, Issue 2 https://doi.org/10.1016/0014-5793(94)00932-5	journal	September 1994
Similarities and differences between human cyclophilin A and other β-barrel structures Ke, Hengming Journal of Molecular Biology, Vol. 228, Issue 2 https://doi.org/10.1016/0022-2836(92)90841-7	journal	November 1992
The X-ray structure of a divergent cyclophilin from the nematode parasite Brugia malayi Taylor, Paul; Page, Antony P.; Kontopidis, George FEBS Letters, Vol. 425, Issue 2 https://doi.org/10.1016/S0014-5793(98)00264-6	journal	March 1998
Cloning and characterization of chloroplast and cytosolic forms of cyclophilin from Arabidopsis thaliana. Lippuner, V.; Chou, I. T.; Scott, S. V. Journal of Biological Chemistry, Vol. 269, Issue 11 https://doi.org/10.1016/S0021-9258(17)37130-2	journal	March 1994
Three-dimensional Solution Structure of an Archaeal FKBP with a Dual Function of Peptidyl Prolyl cis–trans Isomerase and Chaperone-like Activities Suzuki, Rintaro; Nagata, Koji; Yumoto, Fumiaki Journal of Molecular Biology, Vol. 328, Issue 5 https://doi.org/10.1016/S0022-2836(03)00379-6	journal	May 2003
Crystal Structure of a Complex Between Human Spliceosomal Cyclophilin H and a U4/U6 snRNP-60K Peptide Reidt, Ulrich; Wahl, Markus C.; Fasshauer, Dirk Journal of Molecular Biology, Vol. 331, Issue 1 https://doi.org/10.1016/S0022-2836(03)00684-3	journal	August 2003
Studies on the expression of the wheat prolyl isomerase FKBP73 during plant development Aviezer, Keren; Kurek, Isaac; Erel, Noa Plant Science, Vol. 139, Issue 2 https://doi.org/10.1016/S0168-9452(98)00168-X	journal	December 1998
Enzymes that catalyse the restructuring of proteins Schiene, Cordelia; Fischer, Gunter Current Opinion in Structural Biology, Vol. 10, Issue 1 https://doi.org/10.1016/S0959-440X(99)00046-9	journal	February 2000
Two Structures of Cyclophilin 40 Taylor, Paul; Dornan, Jacqueline; Carrello, Amerigo Structure, Vol. 9, Issue 5 https://doi.org/10.1016/S0969-2126(01)00603-7	journal	May 2001
Point Mutations in v-Myb Disrupt a Cyclophilin-Catalyzed Negative Regulatory Mechanism Leverson, Joel D.; Ness, Scott A. Molecular Cell, Vol. 1, Issue 2 https://doi.org/10.1016/S1097-2765(00)80021-0	journal	January 1998
Molecular and functional characterization of a cyclophilin with antifungal activity from Chinese cabbage Lee, Jung Ro; Park, Seong-Cheol; Kim, Jin-Young Biochemical and Biophysical Research Communications, Vol. 353, Issue 3 https://doi.org/10.1016/j.bbrc.2006.12.102	journal	February 2007
Proline Isomerization of the Immune Receptor-Interacting Protein RIN4 by a Cyclophilin Inhibits Effector-Triggered Immunity in Arabidopsis Li, Meng; Ma, Xiqing; Chiang, Yi-Hsuan Cell Host & Microbe, Vol. 16, Issue 4 https://doi.org/10.1016/j.chom.2014.09.007	journal	October 2014
Organization and function of the FKBP52 and FKBP51 genes Cioffi, Donna L.; Hubler, Tina R.; Scammell, Jonathan G. Current Opinion in Pharmacology, Vol. 11, Issue 4 https://doi.org/10.1016/j.coph.2011.03.013	journal	August 2011
Crystal structure of a plant immunophilin domain involved in regulation of MDR-type ABC transporters Weiergräber, Oliver H.; Eckhoff, Andreas; Granzin, Joachim FEBS Letters, Vol. 580, Issue 1 https://doi.org/10.1016/j.febslet.2005.12.007	journal	December 2005
Profound redox sensitivity of peptidyl-prolyl isomerase activity in Arabidopsis thylakoid lumen Shapiguzov, Alexey; Edvardsson, Anna; Vener, Alexander V. FEBS Letters, Vol. 580, Issue 15 https://doi.org/10.1016/j.febslet.2006.05.054	journal	June 2006
AtCYP20-2 is an auxiliary protein of the chloroplast NAD(P)H dehydrogenase complex Sirpiö, Sari; Holmström, Maija; Battchikova, Natalia FEBS Letters, Vol. 583, Issue 14 https://doi.org/10.1016/j.febslet.2009.06.031	journal	June 2009
The FKBP families of higher plants: Exploring the structures and functions of protein interaction specialists Gollan, Peter J.; Bhave, Mrinal; Aro, Eva-Mari FEBS Letters, Vol. 586, Issue 20 https://doi.org/10.1016/j.febslet.2012.09.002	journal	September 2012
Genome-wide analysis and environmental response profiling of the FK506-binding protein gene family in maize (Zea mays L.) Yu, Yanli; Zhang, Hui; Li, Wencai Gene, Vol. 498, Issue 2 https://doi.org/10.1016/j.gene.2012.01.094	journal	May 2012
The Fusarium Graminearum virulence factor FGL targets an FKBP12 immunophilin of wheat Niu, Xiao-Wei; Zheng, Zi-Yang; Feng, Yi-Gao Gene, Vol. 525, Issue 1 https://doi.org/10.1016/j.gene.2013.04.052	journal	August 2013
Characterization of three Arabidopsis thaliana immunophilin genes involved in the plant defense response against Pseudomonas syringae Pogorelko, Gennady V.; Mokryakova, Maria; Fursova, Oksana V. Gene, Vol. 538, Issue 1 https://doi.org/10.1016/j.gene.2014.01.029	journal	March 2014
Crystal Structure of a Multi-domain Immunophilin from Arabidopsis thaliana: A Paradigm for Regulation of Plant ABC Transporters Granzin, Joachim; Eckhoff, Andreas; Weiergräber, Oliver H. Journal of Molecular Biology, Vol. 364, Issue 4 https://doi.org/10.1016/j.jmb.2006.09.052	journal	December 2006
Structural, Biochemical, and in Vivo Characterization of the First Virally Encoded Cyclophilin from the Mimivirus Thai, Vu; Renesto, Patricia; Fowler, C. Andrew Journal of Molecular Biology, Vol. 378, Issue 1 https://doi.org/10.1016/j.jmb.2007.08.051	journal	April 2008
The expression of the large rice FK506 binding proteins (FKBPs) demonstrate tissue specificity and heat stress responsiveness Magiri, Esther N.; Farchi-Pisanty, Odelia; Avni, Adi Plant Science, Vol. 170, Issue 4 https://doi.org/10.1016/j.plantsci.2005.09.013	journal	April 2006
A thylakoid-localised FK506-binding protein in wheat may be linked to chloroplast biogenesis Gollan, Peter J.; Bhave, Mrinal Plant Physiology and Biochemistry, Vol. 48, Issue 8 https://doi.org/10.1016/j.plaphy.2010.05.002	journal	August 2010
Toward an Understanding of the Mechanism of Nonphotochemical Quenching in Green Plants ^† Holt, Nancy E.; Fleming, Graham R.; Niyogi, Krishna K. Biochemistry, Vol. 43, Issue 26 https://doi.org/10.1021/bi0494020	journal	July 2004
Immunophilin AtFKBP13 Sustains All Peptidyl−Prolyl Isomerase Activity in the Thylakoid Lumen from Arabidopsis thaliana Deficient in AtCYP20-2 Edvardsson, Anna; Shapiguzov, Alexey; Petersson, Ulrika A. Biochemistry, Vol. 46, Issue 33 https://doi.org/10.1021/bi700426q	journal	July 2007
Role of Prolyl cis/trans Isomers in Cyclophilin-Assisted Pseudomonas syringae AvrRpt2 Protease Activation Aumüller, Tobias; Jahreis, Günther; Fischer, Gunter Biochemistry, Vol. 49, Issue 5 https://doi.org/10.1021/bi901813e	journal	February 2010
Binding of Immunophilins to the 90 kDa Heat Shock Protein (hsp90) via a Tetratricopeptide Repeat Domain Is a Conserved Protein Interaction in Plants Owens-Grillo, Janet K.; Stancato, Louis F.; Hoffmann, Kai Biochemistry, Vol. 35, Issue 48 https://doi.org/10.1021/bi9615349	journal	January 1996
A Cyclophilin-Regulated PP2A-like Protein Phosphatase in Thylakoid Membranes of Plant Chloroplasts Vener, Alexander V.; Rokka, Anne; Fulgosi, Hrvoje Biochemistry, Vol. 38, Issue 45 https://doi.org/10.1021/bi990971v	journal	October 1999
Functional Drift of Sequence Attributes in the FK506-Binding Proteins (FKBPs) Galat, Andrzej Journal of Chemical Information and Modeling, Vol. 48, Issue 5 https://doi.org/10.1021/ci700429n	journal	April 2008
Immunophilins: Beyond Immunosuppression Hamilton, G. S.; Steiner, J. P. Journal of Medicinal Chemistry, Vol. 41, Issue 26 https://doi.org/10.1021/jm980307x	journal	December 1998
Deletion of the C-terminal 138 amino acids of the wheat FKBP73 abrogates calmodulin binding, dimerization and male fertility in transgenic rice Kurek, Isaac; Dulberger, Rivka; Azem, Abdussalam Plant Molecular Biology, Vol. 48, Issue 4, p. 369-381 https://doi.org/10.1023/A:1014023329807	journal	January 2002
Overexpression of the Wheat FK506-Binding Protein 73 (FKBP73) and the Heat-Induced Wheat FKBP77 in Transgenic Wheat Reveals Different Functions of the Two Isoforms Kurek, Isaac; Stöger, Eva; Dulberger, Rivka Transgenic Research, Vol. 11, Issue 4, p. 373-379 https://doi.org/10.1023/A:1016374128479	journal	January 2002
Cyclophilin and peptidyl-prolyl cis-trans isomerase are probably identical proteins Fischer, Gunter; Wittmann-Liebold, Brigitte; Lang, Kurt Nature, Vol. 337, Issue 6206 https://doi.org/10.1038/337476a0	journal	February 1989
AtFKBP53 is a histone chaperone required for repression of ribosomal RNA gene expression in Arabidopsis Li, Hong; Luan, Sheng Cell Research, Vol. 20, Issue 3 https://doi.org/10.1038/cr.2010.22	journal	February 2010
Cyclophilin 40 facilitates HSP90-mediated RISC assembly in plants: HSP90 cochaperones in RISC assembly Iki, Taichiro; Yoshikawa, Manabu; Meshi, Tetsuo The EMBO Journal, Vol. 31, Issue 2 https://doi.org/10.1038/emboj.2011.395	journal	November 2011
Diverse HIV viruses are targeted by a conformationally dynamic antiviral Caines, Matthew E. C.; Bichel, Katsiaryna; Price, Amanda J. Nature Structural & Molecular Biology, Vol. 19, Issue 4 https://doi.org/10.1038/nsmb.2253	journal	March 2012
Structure of RNA-interacting Cyclophilin A-like protein from Piriformospora indica that provides salinity-stress tolerance in plants Trivedi, Dipesh Kumar; Bhatt, Harshesh; Pal, Ravi Kant Scientific Reports, Vol. 3, Issue 1 https://doi.org/10.1038/srep03001	journal	October 2013
Role of the cysteine residues in Arabidopsis thaliana cyclophilin CYP20-3 in peptidyl-prolyl cis – trans isomerase and redox-related functions Laxa, Miriam; König, Janine; Dietz, Karl-Josef Biochemical Journal, Vol. 401, Issue 1 https://doi.org/10.1042/BJ20061092	journal	December 2006
Structure-function relationships in the FK506-binding protein (FKBP) family of peptidylprolyl cis-trans isomerases Kay, John E. Biochemical Journal, Vol. 314, Issue 2 https://doi.org/10.1042/bj3140361	journal	March 1996
KIN241: a gene involved in cell morphogenesis in Paramecium tetraurelia reveals a novel protein family of cyclophilin-RNA interacting proteins (CRIPs) conserved from fission yeast to man: A novel cyclophilin-RNA interacting protein Krzywicka, Anna; Beisson, Janine; Keller, Anne-Marie Molecular Microbiology, Vol. 42, Issue 1 https://doi.org/10.1046/j.1365-2958.2001.02634.x	journal	October 2001
Characterization of Arabidopsis thaliana At FKBP42 that is membrane-bound and interacts with Hsp90 Kamphausen, Thilo; Fanghänel, Jörg; Neumann, Dieter The Plant Journal, Vol. 32, Issue 3 https://doi.org/10.1046/j.1365-313X.2002.01420.x	journal	November 2002
Structure of the large FK506-binding protein FKBP51, an Hsp90-binding protein and a component of steroid receptor complexes Sinars, C. R.; Cheung-Flynn, J.; Rimerman, R. A. Proceedings of the National Academy of Sciences, Vol. 100, Issue 3 https://doi.org/10.1073/pnas.0231020100	journal	January 2003
3D structure of human FK506-binding protein 52: Implications for the assembly of the glucocorticoid receptor/Hsp90/immunophilin heterocomplex Wu, B.; Li, P.; Liu, Y. Proceedings of the National Academy of Sciences, Vol. 101, Issue 22 https://doi.org/10.1073/pnas.0305969101	journal	May 2004
Structural analysis uncovers a role for redox in regulating FKBP13, an immunophilin of the chloroplast thylakoid lumen Gopalan, Gayathri; He, Zengyong; Balmer, Yves Proceedings of the National Academy of Sciences, Vol. 101, Issue 38 https://doi.org/10.1073/pnas.0405240101	journal	September 2004
Regulation of the tyrosine kinase Itk by the peptidyl-prolyl isomerase cyclophilin A Brazin, Kristine N.; Mallis, Robert J.; Fulton, D. Bruce Proceedings of the National Academy of Sciences, Vol. 99, Issue 4 https://doi.org/10.1073/pnas.042529199	journal	February 2002
Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs Baumberger, N.; Baulcombe, D. C. Proceedings of the National Academy of Sciences, Vol. 102, Issue 33 https://doi.org/10.1073/pnas.0505461102	journal	August 2005
A redox-active FKBP-type immunophilin functions in accumulation of the photosystem II supercomplex in Arabidopsis thaliana Lima, A.; Lima, S.; Wong, J. H. Proceedings of the National Academy of Sciences, Vol. 103, Issue 33 https://doi.org/10.1073/pnas.0605452103	journal	August 2006
A chloroplast cyclophilin functions in the assembly and maintenance of photosystem II in Arabidopsis thaliana Fu, A.; He, Z.; Cho, H. S. Proceedings of the National Academy of Sciences, Vol. 104, Issue 40 https://doi.org/10.1073/pnas.0707851104	journal	October 2007
A cyclophilin links redox and light signals to cysteine biosynthesis and stress responses in chloroplasts Dominguez-Solis, Jose R.; He, Zengyong; Lima, Amparo Proceedings of the National Academy of Sciences, Vol. 105, Issue 42 https://doi.org/10.1073/pnas.0808204105	journal	October 2008
Cyclophilin 40 is required for microRNA activity in Arabidopsis Smith, Michael R.; Willmann, Matthew R.; Wu, Gang Proceedings of the National Academy of Sciences, Vol. 106, Issue 13 https://doi.org/10.1073/pnas.0812729106	journal	March 2009
Cyclophilin 20-3 relays a 12-oxo-phytodienoic acid signal during stress responsive regulation of cellular redox homeostasis Park, Sang-Wook; Li, Wei; Viehhauser, Andrea Proceedings of the National Academy of Sciences, Vol. 110, Issue 23 https://doi.org/10.1073/pnas.1218872110	journal	May 2013
Nonlinear partial differential equations and applications: A chloroplast FKBP interacts with and affects the accumulation of Rieske subunit of cytochrome bf complex Gupta, R.; Mould, R. M.; He, Z. Proceedings of the National Academy of Sciences, Vol. 99, Issue 24 https://doi.org/10.1073/pnas.222550399	journal	November 2002
Crystal structure of recombinant human T-cell cyclophilin A at 2.5 A resolution. Ke, H. M.; Zydowsky, L. D.; Liu, J. Proceedings of the National Academy of Sciences, Vol. 88, Issue 21 https://doi.org/10.1073/pnas.88.21.9483	journal	November 1991
Light-regulated, tissue-specific immunophilins in a higher plant. Luan, S.; Albers, M. W.; Schreiber, S. L. Proceedings of the National Academy of Sciences, Vol. 91, Issue 3 https://doi.org/10.1073/pnas.91.3.984	journal	February 1994
Molecular characterization of a FKBP-type immunophilin from higher plants. Luan, S.; Kudla, J.; Gruissem, W. Proceedings of the National Academy of Sciences, Vol. 93, Issue 14 https://doi.org/10.1073/pnas.93.14.6964	journal	July 1996
Agrobacterium VirD2 protein interacts with plant host cyclophilins Deng, Wanyin; Chen, Lishan; Wood, Derek W. Proceedings of the National Academy of Sciences, Vol. 95, Issue 12 https://doi.org/10.1073/pnas.95.12.7040	journal	June 1998
Biochemical and Structural Characterization of a Divergent Loop Cyclophilin from Caenorhabditis elegans Dornan, Jacqueline; Page, Antony P.; Taylor, Paul Journal of Biological Chemistry, Vol. 274, Issue 49 https://doi.org/10.1074/jbc.274.49.34877	journal	December 1999
Crystal Structure of the Human U4/U6 Small Nuclear Ribonucleoprotein Particle-specific SnuCyp-20, a Nuclear Cyclophilin Reidt, Ulrich; Reuter, Klaus; Achsel, Tilmann Journal of Biological Chemistry, Vol. 275, Issue 11 https://doi.org/10.1074/jbc.275.11.7439	journal	March 2000
Localization of the Chaperone Domain of FKBP52 Pirkl, Franziska; Fischer, Elke; Modrow, Susanne Journal of Biological Chemistry, Vol. 276, Issue 40 https://doi.org/10.1074/jbc.M102595200	journal	October 2001
Proteome Map of the Chloroplast Lumen of Arabidopsis thaliana Schubert, Maria; Petersson, Ulrika A.; Haas, Brian J. Journal of Biological Chemistry, Vol. 277, Issue 10 https://doi.org/10.1074/jbc.M108575200	journal	November 2001
Occurrence and Characteristics of the Mitochondrial Permeability Transition in Plants Arpagaus, Silvio; Rawyler, André; Braendle, Roland Journal of Biological Chemistry, Vol. 277, Issue 3 https://doi.org/10.1074/jbc.M109416200	journal	January 2002
Binding of the Cyclophilin 40 Ortholog SQUINT to Hsp90 Protein Is Required for SQUINT Function in Arabidopsis Earley, Keith W.; Poethig, R. Scott Journal of Biological Chemistry, Vol. 286, Issue 44 https://doi.org/10.1074/jbc.M111.290130	journal	November 2011
Mitochondrial Targeted Cyclophilin D Protects Cells from Cell Death by Peptidyl Prolyl Isomerization Lin, Da-Ting; Lechleiter, James D. Journal of Biological Chemistry, Vol. 277, Issue 34 https://doi.org/10.1074/jbc.M112035200	journal	August 2002
Primary Identification, Biochemical Characterization, and Immunologic Properties of the Allergenic Pollen Cyclophilin Cat r 1 Ghosh, Debajyoti; Mueller, Geoffrey A.; Schramm, Gabriele Journal of Biological Chemistry, Vol. 289, Issue 31 https://doi.org/10.1074/jbc.M114.559971	journal	August 2014
The C Terminus of the Immunophilin PASTICCINO1 Is Required for Plant Development and for Interaction with a NAC-like Transcription Factor Smyczynski, Cybelle; Roudier, François; Gissot, Lionel Journal of Biological Chemistry, Vol. 281, Issue 35 https://doi.org/10.1074/jbc.M601815200	journal	June 2006
TWISTED DWARF1, a Unique Plasma Membrane-anchored Immunophilin-like Protein, Interacts with Arabidopsis Multidrug Resistance-like Transporters AtPGP1 and AtPGP19 Geisler, Markus; Kolukisaoglu, H. Üner; Bouchard, Rodolphe Molecular Biology of the Cell, Vol. 14, Issue 10 https://doi.org/10.1091/mbc.e02-10-0698	journal	October 2003
Arabidopsis Immunophilin-like TWD1 Functionally Interacts with Vacuolar ABC Transporters Geisler, Markus; Girin, Marjolaine; Brandt, Sabine Molecular Biology of the Cell, Vol. 15, Issue 7 https://doi.org/10.1091/mbc.e03-11-0831	journal	July 2004
A novel multi-functional chloroplast protein: identification of a 40kDa immunophilin-like protein located in the thylakoid lumen Fulgosi, H. The EMBO Journal, Vol. 17, Issue 6 https://doi.org/10.1093/emboj/17.6.1577	journal	March 1998
A cyclophilin functions in pre-mRNA splicing Horowitz, David S.; Lee, Edward J.; Mabon, Stephen A. The EMBO Journal, Vol. 21, Issue 3 https://doi.org/10.1093/emboj/21.3.470	journal	February 2002
PwHAP5, a CCAAT-binding transcription factor, interacts with PwFKBP12 and plays a role in pollen tube growth orientation in Picea wilsonii Yu, Yanli; Li, Yanze; Huang, Guixue Journal of Experimental Botany, Vol. 62, Issue 14 https://doi.org/10.1093/jxb/err120	journal	July 2011
The Cyclophilin AtCYP71 Interacts with CAF-1 and LHP1 and Functions in Multiple Chromatin Remodeling Processes Li, Hong; Luan, Sheng Molecular Plant, Vol. 4, Issue 4 https://doi.org/10.1093/mp/ssr036	journal	July 2011
Cytosolic HSP90 Cochaperones HOP and FKBP Interact with Freshly Synthesized Chloroplast Preproteins of Arabidopsis Fellerer, Christine; Schweiger, Regina; Schöngruber, Katharina Molecular Plant, Vol. 4, Issue 6 https://doi.org/10.1093/mp/ssr037	journal	November 2011
Identification of RNA targets for the nuclear multidomain cyclophilin atCyp59 and their effect on PPIase activity Bannikova, Olga; Zywicki, Marek; Marquez, Yamile Nucleic Acids Research, Vol. 41, Issue 3 https://doi.org/10.1093/nar/gks1252	journal	December 2012
Expression of a Gene for Cyclophilin Which Contains an Amino-Terminal Endoplasmic Reticulum-Targeting Signal Saito, T.; Niwa, Y.; Ashida, H. Plant and Cell Physiology, Vol. 40, Issue 1 https://doi.org/10.1093/oxfordjournals.pcp.a029477	journal	January 1999
Peptidyl–Prolyl Isomerase Activity in Chloroplast Thylakoid Lumen is a Dispensable Function of Immunophilins in Arabidopsis thaliana Ingelsson, Björn; Shapiguzov, Alexey; Kieselbach, Thomas Plant and Cell Physiology, Vol. 50, Issue 10 https://doi.org/10.1093/pcp/pcp122	journal	October 2009
Immunophilins in protein folding and immunosuppression ¹ Fruman, David A.; Burakoff, Steven J.; Bierer, Barbara E. The FASEB Journal, Vol. 8, Issue 6 https://doi.org/10.1096/fasebj.8.6.7513288	journal	April 1994
The Arabidopsis Cyclophilin Gene Family Romano, Patrick G. N.; Horton, Peter; Gray, Julie E. Plant Physiology, Vol. 134, Issue 4 https://doi.org/10.1104/pp.103.022160	journal	April 2004
The Immunophilin-Interacting Protein AtFIP37 from Arabidopsis Is Essential for Plant Development and Is Involved in Trichome Endoreduplication Vespa, Laurent; Vachon, Gilles; Berger, Frédéric Plant Physiology, Vol. 134, Issue 4 https://doi.org/10.1104/pp.103.028050	journal	April 2004
Immunophilins and Parvulins. Superfamily of Peptidyl Prolyl Isomerases in Arabidopsis He, Zengyong; Li, Legong; Luan, Sheng Plant Physiology, Vol. 134, Issue 4 https://doi.org/10.1104/pp.103.031005	journal	March 2004
The ULTRACURVATA2 Gene of Arabidopsis Encodes an FK506-Binding Protein Involved in Auxin and Brassinosteroid Signaling Pérez-Pérez, José Manuel; Ponce, María Rosa; Micol, José Luis Plant Physiology, Vol. 134, Issue 1 https://doi.org/10.1104/pp.103.032524	journal	January 2004
Introducing Immunophilins. From Organ Transplantation to Plant Biology Romano, Patrick; He, Zengyong; Luan, Sheng Plant Physiology, Vol. 134, Issue 4 https://doi.org/10.1104/pp.103.900108	journal	April 2004
A Redox 2-Cys Mechanism Regulates the Catalytic Activity of Divergent Cyclophilins Campos, B. M.; Sforca, M. L.; Ambrosio, A. L. B. PLANT PHYSIOLOGY, Vol. 162, Issue 3 https://doi.org/10.1104/pp.113.218339	journal	May 2013
The Wheat Peptidyl Prolyl cis - trans- Isomerase FKBP77 Is Heat Induced and Developmentally Regulated1 Kurek, Isaac; Aviezer, Keren; Erel, Noa Plant Physiology, Vol. 119, Issue 2 https://doi.org/10.1104/pp.119.2.693	journal	February 1999
Dephosphorylation of Photosystem II Reaction Center Proteins in Plant Photosynthetic Membranes as an Immediate Response to Abrupt Elevation of Temperature Rokka, Anne; Aro, Eva-Mari; Herrmann, Reinhold G. Plant Physiology, Vol. 123, Issue 4 https://doi.org/10.1104/pp.123.4.1525	journal	August 2000
Central Functions of the Lumenal and Peripheral Thylakoid Proteome of Arabidopsis Determined by Experimentation and Genome-Wide Prediction Peltier, Jean-Benoît; Emanuelsson, Olof; Kalume, Dário E. The Plant Cell, Vol. 14, Issue 1 https://doi.org/10.1105/tpc.010304	journal	January 2002
A WD40 Domain Cyclophilin Interacts with Histone H3 and Functions in Gene Repression and Organogenesis in Arabidopsis Li, Hong; He, Zengyong; Lu, Guihua The Plant Cell, Vol. 19, Issue 8 https://doi.org/10.1105/tpc.107.053579	journal	August 2007
Efficient Operation of NAD(P)H Dehydrogenase Requires Supercomplex Formation with Photosystem I via Minor LHCI in Arabidopsis Peng, Lianwei; Fukao, Yoichiro; Fujiwara, Masayuki The Plant Cell, Vol. 21, Issue 11 https://doi.org/10.1105/tpc.109.068791	journal	November 2009
The ER-Localized TWD1 Immunophilin Is Necessary for Localization of Multidrug Resistance-Like Proteins Required for Polar Auxin Transport in Arabidopsis Roots Wu, Guosheng; Otegui, Marisa S.; Spalding, Edgar P. The Plant Cell, Vol. 22, Issue 10 https://doi.org/10.1105/tpc.110.078360	journal	October 2010
Crystal Structure of Arabidopsis Cyclophilin38 Reveals a Previously Uncharacterized Immunophilin Fold and a Possible Autoinhibitory Mechanism Vasudevan, Dileep; Fu, Aigen; Luan, Sheng The Plant Cell, Vol. 24, Issue 6 https://doi.org/10.1105/tpc.111.093781	journal	June 2012
Arabidopsis TWISTED DWARF1 Functionally Interacts with Auxin Exporter ABCB1 on the Root Plasma Membrane Wang, Bangjun; Bailly, Aurélien; Zwiewka, Marta The Plant Cell, Vol. 25, Issue 1 https://doi.org/10.1105/tpc.112.105999	journal	January 2013
The Cyclophilin CYP20-2 Modulates the Conformation of BRASSINAZOLE-RESISTANT1, Which Binds the Promoter of FLOWERING LOCUS D to Regulate Flowering in Arabidopsis Zhang, Y.; Li, B.; Xu, Y. The Plant Cell, Vol. 25, Issue 7 https://doi.org/10.1105/tpc.113.110296	journal	July 2013
A Conserved Domain of the Arabidopsis GNOM Protein Mediates Subunit Interaction and Cyclophilin 5 Binding Grebe, Markus; Gadea, José; Steinmann, Thomas The Plant Cell, Vol. 12, Issue 3 https://doi.org/10.1105/tpc.12.3.343	journal	March 2000
MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures Kraulis, P. J. Journal of Applied Crystallography, Vol. 24, Issue 5 https://doi.org/10.1107/S0021889891004399	journal	October 1991
Structural and biochemical characterization of the cytosolic wheat cyclophilin TaCypA-1 Sekhon, Simranjeet Singh; Kaur, Harsimran; Dutta, Tanima Acta Crystallographica Section D Biological Crystallography, Vol. 69, Issue 4 https://doi.org/10.1107/S0907444912051529	journal	March 2013
Structure of a bacterial cytoplasmic cyclophilin A in complex with a tetrapeptide Christoforides, Elias; Dimou, Maria; Katinakis, Panagiotis Acta Crystallographica Section F Structural Biology and Crystallization Communications, Vol. 68, Issue 3 https://doi.org/10.1107/S1744309112000188	journal	February 2012
The Xanthomonas citri effector protein PthA interacts with citrus proteins involved in nuclear transport, protein folding and ubiquitination associated with DNA repair Domingues, Mariane Noronha; De Souza, Tiago Antonio; Cernadas, RaÚL AndrÉS Molecular Plant Pathology, Vol. 11, Issue 5 https://doi.org/10.1111/j.1364-3703.2010.00636.x	journal	August 2010
Eukaryotic cyclophilin as a molecular switch for effector activation Coaker, Gitta; Zhu, George; Ding, Zhaofeng Molecular Microbiology, Vol. 61, Issue 6 https://doi.org/10.1111/j.1365-2958.2006.05335.x	journal	September 2006
AtCYP38 ensures early biogenesis, correct assembly and sustenance of photosystem II SirpiÃ¶, Sari; Khrouchtchova, Anastassia; Allahverdiyeva, Yagut The Plant Journal, Vol. 55, Issue 4 https://doi.org/10.1111/j.1365-313X.2008.03532.x	journal	August 2008
Arabidopsis ROF1 (FKBP62) modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs Meiri, David; Breiman, Adina The Plant Journal, Vol. 59, Issue 3 https://doi.org/10.1111/j.1365-313X.2009.03878.x	journal	August 2009
Peptidyl-prolyl cis-trans isomerase ROF2 modulates intracellular pH homeostasis in Arabidopsis: ROF2 modulates pH homeostasis Bissoli, Gaetano; Niñoles, Regina; Fresquet, Sandra The Plant Journal, Vol. 70, Issue 4 https://doi.org/10.1111/j.1365-313X.2012.04921.x	journal	March 2012
The cyclophilin ROC1 links phytochrome and cryptochrome to brassinosteroid sensitivity: ROC1, phytochrome, cryptochrome and brassinosteroids Trupkin, Santiago A.; Mora-García, Santiago; Casal, Jorge J. The Plant Journal, Vol. 71, Issue 5 https://doi.org/10.1111/j.1365-313X.2012.05013.x	journal	July 2012
PPIase activities and interaction partners of FK506-binding proteins in the wheat thylakoid Gollan, Peter J.; Ziemann, Mark; Bhave, Mrinal Physiologia Plantarum, Vol. 143, Issue 4 https://doi.org/10.1111/j.1399-3054.2011.01503.x	journal	September 2011
Plant immunophilins: functional versatility beyond protein maturation Romano, Patrick; Gray, Julie; Horton, Peter New Phytologist, Vol. 166, Issue 3 https://doi.org/10.1111/j.1469-8137.2005.01373.x	journal	March 2005
Regulation of the glucocorticoid response to stress-related disorders by the Hsp90-binding immunophilin FKBP51: FKBP51-regulated stress response Galigniana, Natalia M.; Ballmer, Luzia T.; Toneatto, Judith Journal of Neurochemistry, Vol. 122, Issue 1 https://doi.org/10.1111/j.1471-4159.2012.07775.x	journal	May 2012
A gain‐of‐function mutation in the ROC1 gene alters plant architecture in A rabidopsis Ma, Xiqing; Song, Li; Yang, Yaxuan New Phytologist, Vol. 197, Issue 3 https://doi.org/10.1111/nph.12056	journal	December 2012
AtFKBP16-1, a chloroplast lumenal immunophilin, mediates response to photosynthetic stress by regulating PsaL stability Seok, Min Sook; You, Young Nim; Park, Hyun Ji Physiologia Plantarum, Vol. 150, Issue 4 https://doi.org/10.1111/ppl.12116	journal	October 2013
OsCYP2, a chaperone involved in degradation of auxin-responsive proteins, plays crucial roles in rice lateral root initiation Kang, Bo; Zhang, Zhongchen; Wang, Lingling The Plant Journal, Vol. 74, Issue 1 https://doi.org/10.1111/tpj.12106	journal	March 2013
Regulation of Vegetative Phase Change in Arabidopsis thaliana by Cyclophilin 40 Berardini, Tanya Z.; Bollman, Krista; Sun, Hui Science, Vol. 291, Issue 5512 https://doi.org/10.1126/science.1057144	journal	March 2001
Inhibition of FKBP Rotamase Activity by Immunosuppressant FK506: Twisted Amide Surrogate Rosen, Mk; Standaert, Rf; Galat, A. Science, Vol. 248, Issue 4957 https://doi.org/10.1126/science.1693013	journal	May 1990
Chemistry and biology of the immunophilins and their immunosuppressive ligands Schreiber, S. Science, Vol. 251, Issue 4991 https://doi.org/10.1126/science.1702904	journal	January 1991
Solution structure of FKBP, a rotamase enzyme and receptor for FK506 and rapamycin Michnick, S.; Rosen, M.; Wandless, T. Science, Vol. 252, Issue 5007 https://doi.org/10.1126/science.1709301	journal	May 1991
Cyclophilin: a specific cytosolic binding protein for cyclosporin A Handschumacher, R.; Harding, M.; Rice, J. Science, Vol. 226, Issue 4674 https://doi.org/10.1126/science.6238408	journal	November 1984
Mutation in the Arabidopsis PASTICCINO1 Gene, Which Encodes a New FK506-Binding Protein-Like Protein, Has a Dramatic Effect on Plant Development Vittorioso, Paola; Cowling, Rachel; Faure, Jean-Denis Molecular and Cellular Biology, Vol. 18, Issue 5 https://doi.org/10.1128/MCB.18.5.3034	journal	May 1998
FKBP Family Proteins: Immunophilins with Versatile Biological Functions Kang, Cong Bao; Hong, Ye; Dhe-Paganon, Sirano Neurosignals, Vol. 16, Issue 4 https://doi.org/10.1159/000123041	journal	January 2008
Classification of rice (Oryza satival. japonica nipponbare) immunophilins (FKBPs, CYPs) and expression patterns under water stress Ahn, Jun Cheul; Kim, Dae-Won; You, Young Nim BMC Plant Biology, Vol. 10, Issue 1 https://doi.org/10.1186/1471-2229-10-253	journal	November 2010
Proteomic identification of OsCYP2, a rice cyclophilin that confers salt tolerance in rice (Oryza sativa L.) seedlings when overexpressed Ruan, Song-Lin; Ma, Hua-Sheng; Wang, Shi-Heng BMC Plant Biology, Vol. 11, Issue 1 https://doi.org/10.1186/1471-2229-11-34	journal	January 2011
Crystal structures of wild-type and mutated cyclophilin B that causes hyperelastosis cutis in the American quarter horse Boudko, Sergei P.; Ishikawa, Yoshihiro; Lerch, Thomas F. BMC Research Notes, Vol. 5, Issue 1 https://doi.org/10.1186/1756-0500-5-626	journal	November 2012
An endogenous F-box protein regulates ARGONAUTE1 in Arabidopsis thaliana Earley, K.; Smith, Mr; Weber, R. Silence, Vol. 1, Issue 1 https://doi.org/10.1186/1758-907X-1-15	journal	July 2010
The PASTICCINO genes of Arabidopsis thaliana are involved in the control of cell division and differentiation Faure, J. D.; Vittorioso, P.; Santoni, V. Development, Vol. 125, Issue 5 https://doi.org/10.1242/dev.125.5.909	journal	March 1998
AtCyp59 is a multidomain cyclophilin from Arabidopsis thaliana that interacts with SR proteins and the C-terminal domain of the RNA polymerase II Gullerova, Monika; Barta, Andrea; LorkoviĆ, Zdravko J. RNA, Vol. 12, Issue 4 https://doi.org/10.1261/rna.2226106	journal	February 2006
The Arabidopsis thaliana Immunophilin ROF1 Directly Interacts with PI(3)P and PI(3,5)P2 and Affects Germination under Osmotic Stress Karali, Debora; Oxley, David; Runions, John PLoS ONE, Vol. 7, Issue 11 https://doi.org/10.1371/journal.pone.0048241	journal	November 2012
The TPR Domain in the Host Cyp40-like Cyclophilin Binds to the Viral Replication Protein and Inhibits the Assembly of the Tombusviral Replicase Lin, Jing-Yi; Mendu, Venugopal; Pogany, Judit PLoS Pathogens, Vol. 8, Issue 2 https://doi.org/10.1371/journal.ppat.1002491	journal	February 2012
Insights into Immunophilin Structure and Function Lucke, C.; Weiwad, M. Current Medicinal Chemistry, Vol. 18, Issue 35 https://doi.org/10.2174/092986711798194324	journal	December 2011
Peptidylprolyl Cis / Trans Isomerases (Immunophilins): Biological Diversity - Targets - Functions Galat, Andrzej Current Topics in Medicinal Chemistry, Vol. 3, Issue 12 https://doi.org/10.2174/1568026033451862	journal	August 2003
Structures of Immunophilins and their Ligand Complexes Dornan, Jacqueline; Taylor, Paul; Walkinshaw, Malcolm Current Topics in Medicinal Chemistry, Vol. 3, Issue 12 https://doi.org/10.2174/1568026033451899	journal	August 2003
A Rice Immunophilin Gene, OsFKBP16-3, Confers Tolerance to Environmental Stress in Arabidopsis and Rice Park, Hyun; Lee, Sang; You, Young International Journal of Molecular Sciences, Vol. 14, Issue 3 https://doi.org/10.3390/ijms14035899	journal	March 2013
Multiple abiotic stress responsive rice cyclophilin: (OsCYP-25) mediates a wide range of cellular responses Trivedi, Dipesh Kumar; Ansari, Mohammad Wahid; Tuteja, Narendra Communicative & Integrative Biology, Vol. 6, Issue 5 https://doi.org/10.4161/cib.25260	journal	September 2013
Cyclophilins: Proteins in search of function Kumari, Sumita; Roy, Suchismita; Singh, Prabhjeet Plant Signaling & Behavior, Vol. 8, Issue 1 https://doi.org/10.4161/psb.22734	journal	January 2013

Similar Records

Structure–function relationships of immunostimulatory polysaccharides: A review

Journal Article · Sat Oct 31 20:00:00 EDT 2015 · Carbohydrate Polymers · OSTI ID:2279920

Molecular Structures and Functional Relationships in Clostridial Neurotoxins

Journal Article · Wed Nov 30 23:00:00 EST 2011 · FEBS Journal · OSTI ID:1041594

Plant immunophilins: a review of their structure-function relationship

Citation Formats

References (145)

Similar Records

Related Subjects