Three-Dimensional Reconstruction of the Giant Mimivirus Particle with an X-Ray Free-Electron Laser

Ekeberg, Tomas; Svenda, Martin; Abergel, Chantal; Maia, Filipe R. N. C.; Seltzer, Virginie; Claverie, Jean-Michel; Hantke, Max; Jönsson, Olof; Nettelblad, Carl; van der Schot, Gijs; Liang, Mengning; DePonte, Daniel P.; Barty, Anton; Seibert, M. Marvin; Iwan, Bianca; Andersson, Inger; Loh, N. Duane; Martin, Andrew V.; Chapman, Henry; Bostedt, Christoph; Bozek, John D.; Ferguson, Ken R.; Krzywinski, Jacek; Epp, Sascha W.; Rolles, Daniel; Rudenko, Artem; Hartmann, Robert; Kimmel, Nils; Hajdu, Janos

doi:10.1103/PhysRevLett.114.098102

Three-Dimensional Reconstruction of the Giant Mimivirus Particle with an X-Ray Free-Electron Laser

Journal Article · Sun Mar 01 23:00:00 EST 2015 · Physical Review Letters

DOI:https://doi.org/10.1103/PhysRevLett.114.098102· OSTI ID:1180533

Ekeberg, Tomas; Svenda, Martin; Abergel, Chantal; Maia, Filipe R. N. C.; Seltzer, Virginie; Claverie, Jean-Michel; Hantke, Max; Jönsson, Olof; Nettelblad, Carl; van der Schot, Gijs; Liang, Mengning; DePonte, Daniel P.; Barty, Anton; Seibert, M. Marvin; Iwan, Bianca; Andersson, Inger; Loh, N. Duane; Martin, Andrew V.; Chapman, Henry; Bostedt, Christoph more »

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Sponsoring Organization:: USDOE Office of Science (SC), Basic Energy Sciences (BES)

OSTI ID:: 1180533

Journal Information:: Physical Review Letters, Journal Name: Physical Review Letters Journal Issue: 9 Vol. 114; ISSN 0031-9007; ISSN PRLTAO

Publisher:: American Physical SocietyCopyright Statement

Country of Publication:: United States

Language:: English

References (24)

Optimal Determination of Particle Orientation, Absolute Hand, and Contrast Loss in Single-particle Electron Cryomicroscopy Rosenthal, Peter B.; Henderson, Richard Journal of Molecular Biology, Vol. 333, Issue 4 https://doi.org/10.1016/j.jmb.2003.07.013	journal	October 2003
Potential for biomolecular imaging with femtosecond X-ray pulses Neutze, Richard; Wouts, Remco; van der Spoel, David Nature, Vol. 406, Issue 6797 https://doi.org/10.1038/35021099	journal	August 2000
Free R value: a novel statistical quantity for assessing the accuracy of crystal structures Brünger, Axel T. Nature, Vol. 355, Issue 6359 https://doi.org/10.1038/355472a0	journal	January 1992
Determination of the fold of the core protein of hepatitis B virus by electron cryomicroscopy Böttcher, B.; Wynne, S. A.; Crowther, R. A. Nature, Vol. 386, Issue 6620 https://doi.org/10.1038/386088a0	journal	March 1997
Single mimivirus particles intercepted and imaged with an X-ray laser Seibert, M. Marvin; Ekeberg, Tomas; Maia, Filipe R. N. C. Nature, Vol. 470, Issue 7332 https://doi.org/10.1038/nature09748	journal	February 2011
Femtosecond X-ray protein nanocrystallography Chapman, Henry N.; Fromme, Petra; Barty, Anton Nature, Vol. 470, Issue 7332, p. 73-77 https://doi.org/10.1038/nature09750	journal	February 2011
Imaging live cell in micro-liquid enclosure by X-ray laser diffraction Kimura, Takashi; Joti, Yasumasa; Shibuya, Akemi Nature Communications, Vol. 5, Issue 1 https://doi.org/10.1038/ncomms4052	journal	January 2014
Macromolecular structures probed by combining single-shot free-electron laser diffraction with synchrotron coherent X-ray imaging Gallagher-Jones, Marcus; Bessho, Yoshitaka; Kim, Sunam Nature Communications, Vol. 5, Issue 1 https://doi.org/10.1038/ncomms4798	journal	May 2014
Single-shot three-dimensional structure determination of nanocrystals with femtosecond X-ray free-electron laser pulses Xu, Rui; Jiang, Huaidong; Song, Changyong Nature Communications, Vol. 5, Issue 1 https://doi.org/10.1038/ncomms5061	journal	June 2014
Imaging single cells in a beam of live cyanobacteria with an X-ray laser van der Schot, Gijs; Svenda, Martin; Maia, Filipe R. N. C. Nature Communications, Vol. 6, Issue 1 https://doi.org/10.1038/ncomms6704	journal	February 2015
High-throughput imaging of heterogeneous cell organelles with an X-ray laser Hantke, Max F.; Hasse, Dirk; Maia, Filipe R. N. C. Nature Photonics, Vol. 8, Issue 12 https://doi.org/10.1038/nphoton.2014.270	journal	November 2014
Femtosecond diffractive imaging with a soft-X-ray free-electron laser Chapman, Henry N.; Barty, Anton; Bogan, Michael J. Nature Physics, Vol. 2, Issue 12 https://doi.org/10.1038/nphys461	journal	November 2006
Invited Article: A unified evaluation of iterative projection algorithms for phase retrieval Marchesini, S. Review of Scientific Instruments, Vol. 78, Issue 1 https://doi.org/10.1063/1.2403783	journal	January 2007
Biological imaging by soft x-ray diffraction microscopy Shapiro, D.; Thibault, P.; Beetz, T. Proceedings of the National Academy of Sciences, Vol. 102, Issue 43 https://doi.org/10.1073/pnas.0503305102	journal	October 2005
X-ray image reconstruction from a diffraction pattern alone Marchesini, S.; He, H.; Chapman, H. N. Physical Review B, Vol. 68, Issue 14 https://doi.org/10.1103/PhysRevB.68.140101	journal	October 2003
Reconstruction algorithm for single-particle diffraction imaging experiments Loh, Ne-Te Duane; Elser, Veit Physical Review E, Vol. 80, Issue 2 https://doi.org/10.1103/PhysRevE.80.026705	journal	August 2009
Cryptotomography: Reconstructing 3D Fourier Intensities from Randomly Oriented Single-Shot Diffraction Patterns Loh, N. D.; Bogan, M. J.; Elser, V. Physical Review Letters, Vol. 104, Issue 22 https://doi.org/10.1103/PhysRevLett.104.225501	journal	June 2010
Hawk : the image reconstruction package for coherent X-ray diffractive imaging Maia, Filipe R. N. C.; Ekeberg, Tomas; van der Spoel, David Journal of Applied Crystallography, Vol. 43, Issue 6 https://doi.org/10.1107/S0021889810036083	journal	October 2010
The 1.2-Megabase Genome Sequence of Mimivirus Raoult, D. Science, Vol. 306, Issue 5700 https://doi.org/10.1126/science.1101485	journal	November 2004
Phase retrieval algorithms: a comparison Fienup, J. R. Applied Optics, Vol. 21, Issue 15 https://doi.org/10.1364/AO.21.002758	journal	January 1982
Data preparation and evaluation techniques for x-ray diffraction microscopy Steinbrener, Jan; Nelson, Johanna; Huang, Xiaojing Optics Express, Vol. 18, Issue 18 https://doi.org/10.1364/OE.18.018598	journal	January 2010
Reconstruction of an object from the modulus of its Fourier transform Fienup, J. R. Optics Letters, Vol. 3, Issue 1, p. 27-29 https://doi.org/10.1364/OL.3.000027	journal	January 1978
Distinct DNA Exit and Packaging Portals in the Virus Acanthamoeba polyphaga mimivirus Zauberman, Nathan; Mutsafi, Yael; Halevy, Daniel Ben PLoS Biology, Vol. 6, Issue 5 https://doi.org/10.1371/journal.pbio.0060114	journal	May 2008
Structural Studies of the Giant Mimivirus Xiao, Chuan; Kuznetsov, Yurii G.; Sun, Siyang PLoS Biology, Vol. 7, Issue 4 https://doi.org/10.1371/journal.pbio.1000092	journal	April 2009

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