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X-Ray Diffraction data from nanobody-bound viral GPCR bound to human chemokine CX3CL1, source of 4XT1 structure
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dataset
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January 2016 |
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Extending the treatment of backbone energetics in protein force fields: Limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations
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journal
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August 2004 |
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CHARMM-GUI: A web-based graphical user interface for CHARMM
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journal
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March 2008 |
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CHARMM: The biomolecular simulation program
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July 2009 |
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CHARMM general force field: A force field for drug-like molecules compatible with the CHARMM all-atom additive biological force fields
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journal
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January 2009 |
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CHARMM-GUI Membrane Builder toward realistic biological membrane simulations
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August 2014 |
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Exploring the gas access routes in a [NiFeSe] hydrogenase using crystals pressurized with krypton and oxygen
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journal
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August 2020 |
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Constitutively Active Chemokine CXC Receptors
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book
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Detergents Destabilize the Cubic Phase of Monoolein: Implications for Membrane Protein Crystallization
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[20] Processing of X-ray diffraction data collected in oscillation mode
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[19] Integrated methods for the construction of three-dimensional models and computational probing of structure-function relations in G protein-coupled receptors
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Function, diversity and therapeutic potential of the N-terminal domain of human chemokine receptors
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Activation Mechanism of the β2-Adrenergic Receptor
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January 2012 |
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SPFP: Speed without compromise—A mixed precision model for GPU accelerated molecular dynamics simulations
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February 2013 |
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Alpaca (Lama pacos) as a convenient source of recombinant camelid heavy chain antibodies (VHHs)
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July 2007 |
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Inference of Macromolecular Assemblies from Crystalline State
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journal
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September 2007 |
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BacMam system for high-level expression of recombinant soluble and membrane glycoproteins for structural studies
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journal
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December 2008 |
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Structural Basis of Receptor Sulfotyrosine Recognition by a CC Chemokine: The N-Terminal Region of CCR3 Bound to CCL11/Eotaxin-1
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journal
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November 2014 |
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HCMV-encoded G-protein-coupled receptors as constitutively active modulators of cellular signaling networks
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journal
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January 2006 |
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Lipidic cubic phases as matrices for membrane protein crystallization
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journal
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November 2004 |
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Solution Structure and Dynamics of the CX 3 C Chemokine Domain of Fractalkine and Its Interaction with an N-Terminal Fragment of CX 3 CR1 † , ‡
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journal
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February 1999 |
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Optimization of the Additive CHARMM All-Atom Protein Force Field Targeting Improved Sampling of the Backbone ϕ, ψ and Side-Chain χ 1 and χ 2 Dihedral Angles
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journal
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August 2012 |
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Routine Microsecond Molecular Dynamics Simulations with AMBER on GPUs. 2. Explicit Solvent Particle Mesh Ewald
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journal
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August 2013 |
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All-Atom Empirical Potential for Molecular Modeling and Dynamics Studies of Proteins †
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journal
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April 1998 |
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Human cytomegalovirus encodes three G protein-coupled receptor homologues
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journal
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A new class of membrane-bound chemokine with a CX3C motif
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The structure and function of G-protein-coupled receptors
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May 2009 |
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The structural basis of agonist-induced activation in constitutively active rhodopsin
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March 2011 |
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Crystal structure of the β2 adrenergic receptor–Gs protein complex
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journal
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July 2011 |
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Molecular signatures of G-protein-coupled receptors
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journal
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February 2013 |
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Adrenaline-activated structure of β2-adrenoceptor stabilized by an engineered nanobody
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journal
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September 2013 |
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Structural basis for modulation of a G-protein-coupled receptor by allosteric drugs
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journal
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October 2013 |
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Large-scale evaluation of protein reductive methylation for improving protein crystallization
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journal
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October 2008 |
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Isolating and engineering human antibodies using yeast surface display
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journal
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July 2006 |
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Crystallizing membrane proteins using lipidic mesophases
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journal
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April 2009 |
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Herpesvirus-encoded GPCRs: neglected players in inflammatory and proliferative diseases?
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journal
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Chemokine receptors: multifaceted therapeutic targets
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journal
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February 2002 |
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Viral hijacking of G-protein-coupled-receptor signalling networks
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December 2004 |
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PARP1 exhibits enhanced association and catalytic efficiency with γH2A.X-nucleosome
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journal
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December 2019 |
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Synthetic antibodies against BRIL as universal fiducial marks for single−particle cryoEM structure determination of membrane proteins
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journal
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March 2020 |
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Human aminolevulinate synthase structure reveals a eukaryotic-specific autoinhibitory loop regulating substrate binding and product release
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journal
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June 2020 |
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Effect of Amoxicillin in combination with Imipenem-Relebactam against Mycobacterium abscessus
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journal
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January 2020 |
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The Many Roles of Chemokines and Chemokine Receptors in Inflammation
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journal
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Activation mechanism of the 2-adrenergic receptor
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journal
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October 2011 |
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Stabilized G protein binding site in the structure of constitutively active metarhodopsin-II
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journal
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The Second Intracellular Loop of the m5 Muscarinic Receptor Is the Switch Which Enables G-protein Coupling
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Identification of Residues of CXCR4 Critical for Human Immunodeficiency Virus Coreceptor and Chemokine Receptor Activities
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The Crystal Structure of the Chemokine Domain of Fractalkine Shows a Novel Quaternary Arrangement
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journal
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The Chemokine Receptor CCR1 Is Constitutively Active, Which Leads to G Protein-independent, β-Arrestin-mediated Internalization
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Identification of the First Nonpeptidergic Inverse Agonist for a Constitutively Active Viral-encoded G Protein-coupled Receptor
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The Carboxyl Terminus of Human Cytomegalovirus-encoded 7 Transmembrane Receptor US28 Camouflages Agonism by Mediating Constitutive Endocytosis
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CC and CX3C Chemokines Differentially Interact with the N Terminus of the Human Cytomegalovirus-encoded US28 Receptor
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OPM: Orientations of Proteins in Membranes database
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GPCRDB: an information system for G protein-coupled receptors
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TLSMD web server for the generation of multi-group TLS models
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Optimal description of a protein structure in terms of multiple groups undergoing TLS motion
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MolProbity : all-atom structure validation for macromolecular crystallography
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December 2009 |
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XDS
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journal
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Features and development of Coot
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journal
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Towards automated crystallographic structure refinement with phenix.refine
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The CCP4 suite programs for protein crystallography
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Structures of the CXCR4 Chemokine GPCR with Small-Molecule and Cyclic Peptide Antagonists
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Structure of the CCR5 Chemokine Receptor-HIV Entry Inhibitor Maraviroc Complex
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journal
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Crystal Structure of Rhodopsin: A G Protein-Coupled Receptor
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journal
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Structural Basis of CXCR4 Sulfotyrosine Recognition by the Chemokine SDF-1/CXCL12
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Structure-Function of the G Protein–Coupled Receptor Superfamily
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Automated Builder and Database of Protein/Membrane Complexes for Molecular Dynamics Simulations
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Structural Basis of Chemokine Sequestration by CrmD, a Poxvirus-Encoded Tumor Necrosis Factor Receptor
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Interaction of Chemokines with their Receptors – From Initial Chemokine Binding to Receptor Activating Steps
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CHARMM: the biomolecular simulation program
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text
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Collaboration gets the most out of software
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September 2013 |