Identification of Residues of CXCR4 Critical for Human Immunodeficiency Virus Coreceptor and Chemokine Receptor Activities
|
journal
|
May 2000 |
Mechanism of Fast Peptide Recognition by SH3 Domains
|
journal
|
September 2008 |
Crystal structure of the chemokine receptor CXCR4 in complex with a viral chemokine
|
journal
|
January 2015 |
On searching in, sampling of, and dynamically moving through conformational space of biomolecular systems: A review
|
journal
|
January 2007 |
Enhanced Sampling in Molecular Dynamics Using Metadynamics, Replica-Exchange, and Temperature-Acceleration
|
journal
|
December 2013 |
Dissociation of the signalling and antiviral properties of SDF-1-derived small peptides
|
journal
|
March 1998 |
Atomic-Level Characterization of the Structural Dynamics of Proteins
|
journal
|
October 2010 |
How Does a Drug Molecule Find Its Target Binding Site?
|
journal
|
June 2011 |
Gaussian Accelerated Molecular Dynamics: Unconstrained Enhanced Sampling and Free Energy Calculation
|
journal
|
July 2015 |
The significance of cancer cell expression of the chemokine receptor CXCR4
|
journal
|
June 2004 |
Understanding the molecular basis of agonist/antagonist mechanism of human mu opioid receptor through gaussian accelerated molecular dynamics method
|
journal
|
August 2017 |
N-terminal Peptides of Stromal Cell-derived Factor-1 with CXC Chemokine Receptor 4 Agonist and Antagonist Activities
|
journal
|
August 1998 |
Pathway and mechanism of drug binding to chemokine receptors revealed by accelerated molecular simulations
|
journal
|
July 2020 |
Isolation of a Structural Mechanism for Uncoupling T Cell Receptor Signaling from Peptide-MHC Binding
|
journal
|
July 2018 |
Allosteric binding sites on cell-surface receptors: novel targets for drug discovery
|
journal
|
March 2002 |
Deciphering Off-Target Effects in CRISPR-Cas9 through Accelerated Molecular Dynamics
|
journal
|
March 2019 |
Structure and dynamics of the M3 muscarinic acetylcholine receptor
|
journal
|
February 2012 |
Identification of Allosteric Peptide Agonists of CXCR4
|
journal
|
January 2003 |
Pathway and mechanism of drug binding to G-protein-coupled receptors
|
journal
|
July 2011 |
Kinetics of CXCL12 binding to atypical chemokine receptor 3 reveal a role for the receptor N terminus in chemokine binding
|
journal
|
September 2019 |
Gaussian Accelerated Molecular Dynamics in NAMD
|
journal
|
December 2016 |
Graded activation and free energy landscapes of a muscarinic G-protein–coupled receptor
|
journal
|
October 2016 |
Peptide Gaussian accelerated molecular dynamics (Pep-GaMD): Enhanced sampling and free energy and kinetics calculations of peptide binding
|
journal
|
October 2020 |
ACEMD: Accelerating Biomolecular Dynamics in the Microsecond Time Scale
|
journal
|
May 2009 |
Structure of the CCR5 Chemokine Receptor-HIV Entry Inhibitor Maraviroc Complex
|
journal
|
September 2013 |
Crosslinking-guided geometry of a complete CXC receptor-chemokine complex and the basis of chemokine subfamily selectivity
|
journal
|
April 2020 |
Particle mesh Ewald: An N ⋅log( N ) method for Ewald sums in large systems
|
journal
|
June 1993 |
Molecular Dynamics Simulation for All
|
journal
|
September 2018 |
Structures of the CXCR4 Chemokine GPCR with Small-Molecule and Cyclic Peptide Antagonists
|
journal
|
October 2010 |
Improved Reweighting of Accelerated Molecular Dynamics Simulations for Free Energy Calculation
|
journal
|
May 2014 |
To milliseconds and beyond: challenges in the simulation of protein folding
|
journal
|
February 2013 |
Structural basis for arginine glycosylation of host substrates by bacterial effector proteins
|
journal
|
October 2018 |
Structural Basis for Binding of Allosteric Drug Leads in the Adenosine A1 Receptor
|
journal
|
November 2018 |
Structure of CC Chemokine Receptor 5 with a Potent Chemokine Antagonist Reveals Mechanisms of Chemokine Recognition and Molecular Mimicry by HIV
|
journal
|
June 2017 |
The N terminus of interleukin-8 (IL-8) receptor confers high affinity binding to human IL-8
|
journal
|
July 1994 |
Allosteric peptide regulators of chemokine receptors CXCR4 and CXCR7
|
journal
|
November 2013 |
Molecular dynamics simulations of biomolecules
|
journal
|
September 2002 |
CRISPR-Cas9 conformational activation as elucidated from enhanced molecular simulations
|
journal
|
June 2017 |
CXCL12 (SDF-1)/CXCR4 Pathway in Cancer
|
journal
|
May 2010 |
In silico studies of conformational dynamics of Mu opioid receptor performed using gaussian accelerated molecular dynamics
|
journal
|
January 2018 |
C(X)CR in silico: Computer-aided prediction of chemokine receptor–ligand interactions
|
journal
|
December 2012 |
Showcasing modern molecular dynamics simulations of membrane proteins through G protein-coupled receptors
|
journal
|
August 2011 |
GPCRdb: an information system for G protein-coupled receptors
|
journal
|
November 2015 |
A molecular dynamics simulation study decodes the Zika virus NS5 methyltransferase bound to SAH and RNA analogue
|
journal
|
April 2018 |
Enhanced sampling techniques in biomolecular simulations
|
journal
|
November 2015 |
G‐Protein‐Coupled Receptor–Membrane Interactions Depend on the Receptor Activation State
|
journal
|
October 2019 |
Targeting chemokine receptors in chronic inflammatory diseases: An extensive review
|
journal
|
January 2012 |
Unconstrained enhanced sampling for free energy calculations of biomolecules: a review
|
journal
|
July 2016 |
VMD: Visual molecular dynamics
|
journal
|
February 1996 |
Mechanism of the G-protein mimetic nanobody binding to a muscarinic G-protein-coupled receptor
|
journal
|
March 2018 |
Ligand Selectivity and Affinity of Chemokine Receptor CXCR1
|
journal
|
July 2004 |
PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data
|
journal
|
June 2013 |
CHARMM additive and polarizable force fields for biophysics and computer-aided drug design
|
journal
|
May 2015 |