Diatom volatile organic compound production is driven by diel metabolism and the cell cycle

Padaki, Vaishnavi G.; Palmer, Emily; Jiang, Yuan; Buchholz, Holger H.; Kimbrel, Jeffrey A.; Halsey, Kimberly H.

doi:10.3389/fmicb.2025.1620542

Title: Diatom volatile organic compound production is driven by diel metabolism and the cell cycle

Journal Article · Sun Oct 05 00:00:00 UTC 2025 · Frontiers in Microbiology

DOI: https://doi.org/10.3389/fmicb.2025.1620542 · OSTI ID:3016075

Padaki, Vaishnavi G. ^[1]; Palmer, Emily ^[1]; Jiang, Yuan ^[1]; Buchholz, Holger H. ^[1]; Kimbrel, Jeffrey A. ^[2]; Halsey, Kimberly H. ^[1]

Oregon State Univ., Corvallis, OR (United States)
Lawrence Livermore National Laboratory (LLNL), Livermore, CA (United States)

Introduction: Volatile organic compounds (VOCs) are small, low-vapor-pressure molecules emitted from the surface ocean into the atmosphere. In the atmosphere, VOCs can change OH reactivity and condense onto particles to become cloud condensation nuclei. VOCs are produced by phytoplankton, but the conditions leading to VOC accumulation in the surface ocean are poorly understood.Methods: In this study, VOC accumulation was measured in real time over a 12 h day−12 h night cycle in the model diatom Phaeodactylum tricornutum during exponential growth.Results: Sixty-three m/z signals were produced in higher concentrations than in cell-free controls. All VOCs, except methanol, were continuously produced over 24 h. All VOCs accumulated to higher concentrations during the day compared to the night, and 11 VOCs exhibited distinct accumulation patterns during the morning hours. Twenty-seven VOCs were associated with known metabolic pathways in P. tricornutum, with most VOCs involved in amino acid and fatty acid metabolism.Discussion: Patterns of VOC production were strongly associated with diel shifts in cell physiology and the cell cycle. Diel VOC production patterns give a fundamental understanding of the first steps in VOC accumulation in the surface ocean.

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Research Organization:: Lawrence Livermore National Laboratory (LLNL), Livermore, CA (United States)

Sponsoring Organization:: National Aeronautics and Space Administration (NASA); National Science Foundation (NSF); USDOE National Nuclear Security Administration (NNSA)

Grant/Contract Number:: AC52-07NA27344

OSTI ID:: 3016075

Report Number(s):: LLNL--JRNL-2012824

Journal Information:: Frontiers in Microbiology, Journal Name: Frontiers in Microbiology Vol. 16; ISSN 1664-302X

Publisher:: Frontiers Research FoundationCopyright Statement

Country of Publication:: United States

Language:: English

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Formation of carbonyl compounds from UV‐induced photodegradation of humic substances in natural waters: Fate of riverine carbon in the sea Kieber, Robert J.; Zhou, Xianliang; Mopper, Kenneth Limnology and Oceanography, Vol. 35, Issue 7 https://doi.org/10.4319/lo.1990.35.7.1503	journal	November 1990
Biological production of form aldehyde in the marine environment Nuccio, Joseph; Seaton, Pamela J.; Kieber, Robert J. Limnology and Oceanography, Vol. 40, Issue 3 https://doi.org/10.4319/lo.1995.40.3.0521	journal	May 1995
Bacterial growth and grazing on diatom aggregates: Respiratory carbon turnover as a function of aggregate size and sinking velocity Ploug, Helle; Grossart, Hans-Peter Limnology and Oceanography, Vol. 45, Issue 7 https://doi.org/10.4319/lo.2000.45.7.1467	journal	November 2000
Diel variations in the photosynthetic parameters of Prochlorococcus strain PCC 9511: Combined effects of light and cell cycle Bruyant, F.; Babin, M.; Genty, B. Limnology and Oceanography, Vol. 50, Issue 3 https://doi.org/10.4319/lo.2005.50.3.0850	journal	May 2005
Severe ozone air pollution in the Persian Gulf region Lelieveld, J.; Hoor, P.; Jöckel, P. Atmospheric Chemistry and Physics, Vol. 9, Issue 4 https://doi.org/10.5194/acp-9-1393-2009	journal	February 2009
Validity and limitations of simple reaction kinetics to calculate concentrations of organic compounds from ion counts in PTR-MS Holzinger, Rupert; Acton, W. Joe F.; Bloss, William J. Atmospheric Measurement Techniques, Vol. 12, Issue 11 https://doi.org/10.5194/amt-12-6193-2019	journal	November 2019
Quantifying environmental stress-induced emissions of algal isoprene and monoterpenes using laboratory measurements Meskhidze, N.; Sabolis, A.; Reed, R. Biogeosciences, Vol. 12, Issue 3 https://doi.org/10.5194/bg-12-637-2015	journal	January 2015
Basin-scale variability of microbial methanol uptake in the Atlantic Ocean Sargeant, Stephanie L.; Murrell, J. Colin; Nightingale, Philip D. Biogeosciences, Vol. 15, Issue 16 https://doi.org/10.5194/bg-15-5155-2018	journal	August 2018
Dimethylsulfide (DMS), marine biogenic aerosols and the ecophysiology of coral reefs Jackson, Rebecca L.; Gabric, Albert J.; Cropp, Roger Biogeosciences, Vol. 17, Issue 8 https://doi.org/10.5194/bg-17-2181-2020	journal	April 2020

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