Transcriptomic data sets for Novosphingobium aromaticivorans DSM12444 and a ΔSARO_RS14285 mutant grown in the presence of glucose and either protocatechuic, vanillic, syringic, or 4-coumaric acid
Journal Article
·
· Microbiology Resource Announcements
- Universities of Wisconsin, Madison, WI (United States); University of Wisconsin, Madison, WI (United States)
The SARO_RS14285 gene, encoding a transcription factor, was deleted in Novosphingobium aromaticivorans DSM12444. The transcriptomes of the parent and ΔSARO_RS14285 strains were determined when grown in medium containing glucose with or without protocatechuic, vanillic, syringic, or 4-coumaric acid. We present the raw RNA sequencing data obtained from these cultures.
- Research Organization:
- University of Wisconsin, Madison, WI (United States)
- Sponsoring Organization:
- USDOE Office of Science (SC), Biological and Environmental Research (BER)
- Grant/Contract Number:
- AC02-05CH11231; SC0018409
- OSTI ID:
- 2574266
- Journal Information:
- Microbiology Resource Announcements, Journal Name: Microbiology Resource Announcements; ISSN 2576-098X
- Publisher:
- SSPA - American Society for MicrobiologyCopyright Statement
- Country of Publication:
- United States
- Language:
- English
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