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Title: Mutating novel interaction sites in NRP1 reduces SARS-CoV-2 spike protein internalization

Abstract

The global pandemic of coronavirus disease 2019 caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus has become a severe global health problem because of its rapid spread. Both Ace2 and NRP1 provide initial viral binding sites for SARS-CoV-2. Here, we show that cysteine residues located in the vestigial plasminogen-apple-nematode (PAN) domain of NRP1 are necessary for SARS-CoV-2 spike protein internalization. Mutating novel cysteine residues in the PAN altered NRP1 stability and downstream activation of extracellular signal-regulated kinase (ERK) signaling pathway and impaired its interaction with the spike protein. This resulted in a significant reduction in spike protein abundance in Vero-E6 cells for the original, alpha, and delta SARS-CoV-2 variants even in the presence of the Ace2. Moreover, mutating these cysteine residues in NRP1 significantly lowered its association with Plexin-A1. As the spike protein is a critical component for targeted therapy, our biochemical study may represent a distinct mechanism to develop a path for future therapeutic discovery.

Authors:
ORCiD logo; ; ; ;
Publication Date:
Research Org.:
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
Sponsoring Org.:
USDOE Laboratory Directed Research and Development (LDRD) Program; USDOE Office of Science (SC)
OSTI Identifier:
1958900
Alternate Identifier(s):
OSTI ID: 1993703
Grant/Contract Number:  
AC05-00OR22725; 3130F004
Resource Type:
Published Article
Journal Name:
iScience
Additional Journal Information:
Journal Name: iScience Journal Volume: 26 Journal Issue: 4; Journal ID: ISSN 2589-0042
Publisher:
Elsevier
Country of Publication:
Netherlands
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES

Citation Formats

Pal, Debjani, De, Kuntal, Yates, Timothy B., Kolape, Jaydeep, and Muchero, Wellington. Mutating novel interaction sites in NRP1 reduces SARS-CoV-2 spike protein internalization. Netherlands: N. p., 2023. Web. doi:10.1016/j.isci.2023.106274.
Pal, Debjani, De, Kuntal, Yates, Timothy B., Kolape, Jaydeep, & Muchero, Wellington. Mutating novel interaction sites in NRP1 reduces SARS-CoV-2 spike protein internalization. Netherlands. https://doi.org/10.1016/j.isci.2023.106274
Pal, Debjani, De, Kuntal, Yates, Timothy B., Kolape, Jaydeep, and Muchero, Wellington. Sat . "Mutating novel interaction sites in NRP1 reduces SARS-CoV-2 spike protein internalization". Netherlands. https://doi.org/10.1016/j.isci.2023.106274.
@article{osti_1958900,
title = {Mutating novel interaction sites in NRP1 reduces SARS-CoV-2 spike protein internalization},
author = {Pal, Debjani and De, Kuntal and Yates, Timothy B. and Kolape, Jaydeep and Muchero, Wellington},
abstractNote = {The global pandemic of coronavirus disease 2019 caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus has become a severe global health problem because of its rapid spread. Both Ace2 and NRP1 provide initial viral binding sites for SARS-CoV-2. Here, we show that cysteine residues located in the vestigial plasminogen-apple-nematode (PAN) domain of NRP1 are necessary for SARS-CoV-2 spike protein internalization. Mutating novel cysteine residues in the PAN altered NRP1 stability and downstream activation of extracellular signal-regulated kinase (ERK) signaling pathway and impaired its interaction with the spike protein. This resulted in a significant reduction in spike protein abundance in Vero-E6 cells for the original, alpha, and delta SARS-CoV-2 variants even in the presence of the Ace2. Moreover, mutating these cysteine residues in NRP1 significantly lowered its association with Plexin-A1. As the spike protein is a critical component for targeted therapy, our biochemical study may represent a distinct mechanism to develop a path for future therapeutic discovery.},
doi = {10.1016/j.isci.2023.106274},
journal = {iScience},
number = 4,
volume = 26,
place = {Netherlands},
year = {Sat Apr 01 00:00:00 EDT 2023},
month = {Sat Apr 01 00:00:00 EDT 2023}
}

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