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Title: BioParts—A Biological Parts Search Portal and Updates to the ICE Parts Registry Software Platform

Journal Article · · ACS Synthetic Biology
 [1];  [2];  [3];  [3];  [4];  [4];  [4];  [2];  [2]; ORCiD logo [1]; ORCiD logo [1]
  1. DOE Agile BioFoundry, Emeryville, California 94608 ,United States, DOE Joint BioEnergy Institute, Emeryville, California 94608, United States, Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
  2. DOE Joint BioEnergy Institute, Emeryville, California 94608, United States, TeselaGen Biotechnology Inc., San Francisco, California 94107, United States
  3. DOE Agile BioFoundry, Emeryville, California 94608 ,United States, DOE Joint BioEnergy Institute, Emeryville, California 94608, United States, Sandia National Laboratories, Livermore, California 94550, United States
  4. DOE Joint BioEnergy Institute, Emeryville, California 94608, United States, Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States

Not Available

Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States); Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States)
Sponsoring Organization:
USDOE; USDOE National Nuclear Security Administration (NNSA); USDOE Office of Science (SC), Biological and Environmental Research (BER)
Grant/Contract Number:
AC02-05CH11231; NA0003525
OSTI ID:
1817794
Report Number(s):
SAND--2021-13675J
Journal Information:
ACS Synthetic Biology, Journal Name: ACS Synthetic Biology Journal Issue: 10 Vol. 10; ISSN 2161-5063
Publisher:
American Chemical SocietyCopyright Statement
Country of Publication:
United States
Language:
English

References (15)

Engineering biological systems using automated biofoundries journal July 2017
Extending SynBioHub’s Functionality with Plugins journal April 2020
SBOLDesigner 2: An Intuitive Tool for Structural Genetic Design journal April 2017
The Experiment Data Depot: A Web-Based Software Tool for Biological Experimental Data Storage, Sharing, and Visualization journal September 2017
SynBioHub: A Standards-Enabled Design Repository for Synthetic Biology journal January 2018
Opportunities at the Intersection of Synthetic Biology, Machine Learning, and Automation journal July 2019
Communicating Structure and Function in Synthetic Biology Diagrams journal July 2019
The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology journal June 2014
An automated Design-Build-Test-Learn pipeline for enhanced microbial production of fine chemicals journal June 2018
The FAIR Guiding Principles for scientific data management and stewardship journal March 2016
Bioinformatics for the synthetic biology of natural products: integrating across the Design–Build–Test cycle journal January 2016
pLannotate: engineered plasmid annotation journal May 2021
Design, implementation and practice of JBEI-ICE: an open source biological part registry platform and tools journal June 2012
SBOL Visual: A Graphical Language for Genetic Designs journal December 2015
The Synthetic Biology Open Language (SBOL) Version 3: Simplified Data Exchange for Bioengineering journal September 2020