|
Charges fit to electrostatic potentials. II. Can atomic charges be unambiguously fit to electrostatic potentials?
|
journal
|
February 1996 |
|
Comparison of methods for deriving atomic charges from the electrostatic potential and moments
|
journal
|
March 1998 |
|
Generation of OPLS-like charges from molecular electrostatic potential using restraints
|
journal
|
April 1999 |
|
Electron Donation in the Water-Water Hydrogen Bond
|
journal
|
December 2008 |
|
A Quantitative View of Charge Transfer in the Hydrogen Bond: The Water Dimer Case
|
journal
|
July 2014 |
|
A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations
|
journal
|
October 2003 |
|
Voronoi deformation density (VDD) charges: Assessment of the Mulliken, Bader, Hirshfeld, Weinhold, and VDD methods for charge analysis
|
journal
|
January 2003 |
|
Development and testing of a general amber force field
|
journal
|
January 2004 |
|
Charge distribution in the water molecule?A comparison of methods
|
journal
|
January 2004 |
|
Energy partitioning scheme based on self-consistent method for subsystems: Populational space approach
|
journal
|
November 2010 |
|
A self-consistent Hirshfeld method for the atom in the molecule based on minimization of information loss
|
journal
|
February 2011 |
|
Multiwfn: A multifunctional wavefunction analyzer
|
journal
|
December 2011 |
|
An approach to computing electrostatic charges for molecules
|
journal
|
April 1984 |
|
Determining atom-centered monopoles from molecular electrostatic potentials. The need for high sampling density in formamide conformational analysis
|
journal
|
April 1990 |
|
Atomic charges derived from semiempirical methods
|
journal
|
May 1990 |
|
Comparison of atomic charges derived via different procedures
|
journal
|
December 1993 |
|
A model of atoms in molecules based on potential acting on one electron in a molecule: I. Partition and atomic charges obtained from ab initio calculations
|
journal
|
February 2018 |
An overview of the Amber biomolecular simulation package: Amber biomolecular simulation package
- Salomon-Ferrer, Romelia; Case, David A.; Walker, Ross C.
-
Wiley Interdisciplinary Reviews: Computational Molecular Science, Vol. 3, Issue 2
https://doi.org/10.1002/wcms.1121
|
journal
|
September 2012 |
|
Advanced models for water simulations
|
journal
|
September 2017 |
|
Bonded-atom fragments for describing molecular charge densities
|
journal
|
January 1977 |
|
A test of the Hirshfeld definition of atomic charges and moments
|
journal
|
January 1992 |
|
The M06 suite of density functionals for main group thermochemistry, thermochemical kinetics, noncovalent interactions, excited states, and transition elements: two new functionals and systematic testing of four M06-class functionals and 12 other functionals
|
journal
|
July 2007 |
|
On the problem of defining the charge on an atom in a molecule
|
journal
|
January 1968 |
|
GROMACS: A message-passing parallel molecular dynamics implementation
|
journal
|
September 1995 |
|
A precise solution of the rotation bending Schrödinger equation for a triatomic molecule with application to the water molecule
|
journal
|
January 1979 |
|
Temperature dependence of the optical constants for liquid H2O and D2O in the far IR region
|
journal
|
May 1995 |
|
The vibrational spectrum of the water dimer: Comparison between anharmonic ab initio calculations and neon matrix infrared data between 14,000 and 90cm−1
|
journal
|
July 2011 |
|
Dynamical behavior of molecular partial charges implied by the far-infrared spectral profile of liquid water
|
journal
|
August 2018 |
|
Effects of H-bond asymmetry on the electronic properties of liquid water – An AIMD analysis
|
journal
|
November 2019 |
|
GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers
|
journal
|
September 2015 |
|
The electronic properties of water molecules in water clusters and liquid water
|
journal
|
October 2000 |
|
Force Fields for Protein Simulations
|
book
|
January 2003 |
|
Atomic charges for molecular dynamics calculations
|
journal
|
July 2000 |
|
Calculating and Characterizing the Charge Distributions in Solids
|
journal
|
June 2020 |
|
ff14SB: Improving the Accuracy of Protein Side Chain and Backbone Parameters from ff99SB
|
journal
|
July 2015 |
|
How Accurate Is Density Functional Theory at Predicting Dipole Moments? An Assessment Using a New Database of 200 Benchmark Values
|
journal
|
March 2018 |
|
Effects of Intermolecular Charge Transfer in Liquid Water on Raman Spectra
|
journal
|
October 2016 |
|
Atoms in molecules
|
journal
|
January 1985 |
|
Delocalization Error and “Functional Tuning” in Kohn–Sham Calculations of Molecular Properties
|
journal
|
June 2014 |
|
Intermolecular interactions from a natural bond orbital, donor-acceptor viewpoint
|
journal
|
September 1988 |
|
An Extension of the Hirshfeld Method to Open Shell Systems Using Fractional Occupations
|
journal
|
April 2011 |
Charge Model 5: An Extension of Hirshfeld Population Analysis for the Accurate Description of Molecular Interactions in Gaseous and Condensed Phases
- Marenich, Aleksandr V.; Jerome, Steven V.; Cramer, Christopher J.
-
Journal of Chemical Theory and Computation, Vol. 8, Issue 2, p. 527-541
https://doi.org/10.1021/ct200866d
|
journal
|
February 2012 |
|
Partial Atomic Charges and Screened Charge Models of the Electrostatic Potential
|
journal
|
May 2012 |
|
Structure and Dynamics of Liquid Water from ab Initio Molecular Dynamics—Comparison of BLYP, PBE, and revPBE Density Functionals with and without van der Waals Corrections
|
journal
|
March 2012 |
|
Hirshfeld-E Partitioning: AIM Charges with an Improved Trade-off between Robustness and Accurate Electrostatics
|
journal
|
April 2013 |
|
Cooperative Contributions of the Intermolecular Charge Fluxes and Intramolecular Polarizations in the Far-Infrared Spectral Intensities of Liquid Water
|
journal
|
February 2014 |
|
Modeling the Partial Atomic Charges in Inorganometallic Molecules and Solids and Charge Redistribution in Lithium-Ion Cathodes
|
journal
|
November 2014 |
|
Fitting Molecular Electrostatic Potentials from Quantum Mechanical Calculations
|
journal
|
March 2007 |
|
The Effect of Polarizability for Understanding the Molecular Structure of Aqueous Interfaces
|
journal
|
July 2007 |
|
An Anisotropic Polarizable Water Model: Incorporation of All-Atom Polarizabilities into Molecular Mechanics Force Fields
|
journal
|
April 1994 |
|
Principal Components of Ionicity
|
journal
|
August 1994 |
|
A well-behaved electrostatic potential based method using charge restraints for deriving atomic charges: the RESP model
|
journal
|
October 1993 |
|
Network topology in simulated water
|
journal
|
February 1987 |
|
The missing term in effective pair potentials
|
journal
|
November 1987 |
|
Frequency Shifts in the Hydrogen-Bonded OH Stretch in Halide−Water Clusters. The Importance of Charge Transfer
|
journal
|
July 2000 |
|
Effects of Alkali Metal Halide Salts on the Hydrogen Bond Network of Liquid Water
|
journal
|
April 2005 |
|
Structure and Dynamics of the Aqueous Liquid−Vapor Interface: A Comprehensive Particle-Based Simulation Study ⊥
|
journal
|
March 2006 |
|
Comparative DFT Study of van der Waals Complexes: Rare-Gas Dimers, Alkaline-Earth Dimers, Zinc Dimer, and Zinc-Rare-Gas Dimers
|
journal
|
April 2006 |
|
Density Functional for Spectroscopy: No Long-Range Self-Interaction Error, Good Performance for Rydberg and Charge-Transfer States, and Better Performance on Average than B3LYP for Ground States
|
journal
|
December 2006 |
|
Study of Temperature Effect on Far-Infrared Spectra of Liquid H 2 O and D 2 O by Analytical Theory and Molecular Dynamic Simulations
|
journal
|
June 2007 |
|
Intermolecular Electron Density Modulations in Water and Their Effects on the Far-Infrared Spectral Profiles at 6 THz
|
journal
|
May 2011 |
|
Benchmark Structures and Binding Energies of Small Water Clusters with Anharmonicity Corrections
|
journal
|
November 2011 |
|
Benchmarking Quantum Chemical Methods for the Calculation of Molecular Dipole Moments and Polarizabilities
|
journal
|
May 2014 |
|
Dielectric and Terahertz Spectroscopy of Polarizable and Nonpolarizable Water Models: A Comparative Study
|
journal
|
August 2014 |
|
Isobaric−Isothermal Molecular Dynamics Simulations Utilizing Density Functional Theory: An Assessment of the Structure and Density of Water at Near-Ambient Conditions
|
journal
|
September 2009 |
|
Atomic Charges of the Water Molecule and the Water Dimer
|
journal
|
September 1998 |
|
Adiabatic Nuclear and Electronic Sampling Monte Carlo Simulations in the Gibbs Ensemble: Application to Polarizable Force Fields for Water
|
journal
|
March 2000 |
|
Development of Polarizable Water Force Fields for Phase Equilibrium Calculations
|
journal
|
March 2000 |
|
Charge Transfer between Water Molecules As the Possible Origin of the Observed Charging at the Surface of Pure Water
|
journal
|
December 2011 |
|
Characterizing Charge Transfer at Water Ice Interfaces
|
journal
|
October 2012 |
|
Non-bonded force field model with advanced restrained electrostatic potential charges (RESP2)
|
journal
|
April 2020 |
|
Calculation of effective atomic-charges from molecular orbital wavefunctions
|
journal
|
January 1969 |
|
More reliable partial atomic charges when using diffuse basis sets
|
journal
|
January 2002 |
|
Long-range corrected hybrid density functionals with damped atom–atom dispersion corrections
|
journal
|
January 2008 |
|
Simulating water with rigid non-polarizable models: a general perspective
|
journal
|
January 2011 |
|
The total molecular dipole moment for liquid water
|
journal
|
September 2002 |
|
Electric dipole moments of low J states of H 2 O and D 2 O
|
journal
|
September 1973 |
|
Development of an improved four-site water model for biomolecular simulations: TIP4P-Ew
|
journal
|
May 2004 |
|
Electronic Population Analysis on LCAO–MO Molecular Wave Functions. I
|
journal
|
October 1955 |
|
Local hydrogen bonding dynamics and collective reorganization in water: Ultrafast infrared spectroscopy of HOD/D2O
|
journal
|
February 2005 |
|
A potential model for the study of ices and amorphous water: TIP4P/Ice
|
journal
|
June 2005 |
|
A general purpose model for the condensed phases of water: TIP4P/2005
|
journal
|
December 2005 |
|
Semiempirical hybrid density functional with perturbative second-order correlation
|
journal
|
January 2006 |
|
Assessment of a long-range corrected hybrid functional
|
journal
|
December 2006 |
|
Critical analysis and extension of the Hirshfeld atoms in molecules
|
journal
|
April 2007 |
|
Dynamical properties of liquid water from ab initio molecular dynamics performed in the complete basis set limit
|
journal
|
April 2007 |
|
Polarization and charge transfer in the hydration of chloride ions
|
journal
|
January 2010 |
|
Polymorphic transitions in single crystals: A new molecular dynamics method
|
journal
|
December 1981 |
|
The effects of charge transfer on the properties of liquid water
|
journal
|
May 2011 |
|
The structure of water dimer from molecular beam electric resonance spectroscopy
|
journal
|
January 1977 |
|
Infrared spectrum of the water dimer in solid nitrogen. I. Assignment and force constant calculations
|
journal
|
May 1977 |
|
Comparison of simple potential functions for simulating liquid water
|
journal
|
July 1983 |
|
A unified formulation of the constant temperature molecular dynamics methods
|
journal
|
July 1984 |
|
Natural population analysis
|
journal
|
July 1985 |
|
Dielectric relaxation in water. Computer simulations with the TIP4P potential
|
journal
|
August 1986 |
|
The distribution of rings of hydrogen‐bonded molecules in a model of liquid water
|
journal
|
May 1987 |
|
High‐resolution near‐infrared spectroscopy of water dimer
|
journal
|
December 1989 |
|
Particle mesh Ewald: An N ⋅log( N ) method for Ewald sums in large systems
|
journal
|
June 1993 |
|
Density‐functional thermochemistry. III. The role of exact exchange
|
journal
|
April 1993 |
|
Dynamical fluctuating charge force fields: Application to liquid water
|
journal
|
October 1994 |
|
The intermolecular dynamics of liquid water
|
journal
|
January 1995 |
|
Ab initio studies of cyclic water clusters (H 2 O) n , n =1–6. III. Comparison of density functional with MP2 results
|
journal
|
March 1995 |
|
A smooth particle mesh Ewald method
|
journal
|
November 1995 |
|
The effects of charge transfer on the aqueous solvation of ions
|
journal
|
July 2012 |
|
The water hexamer: Three-body interactions, structures, energetics, and OH-stretch spectroscopy at finite temperature
|
journal
|
September 2012 |
|
Generalized molecular mechanics including quantum electronic structure variation of polar solvents. II. A molecular dynamics simulation study of water
|
journal
|
February 1998 |
|
How intermolecular charge transfer influences the air-water interface
|
journal
|
October 2012 |
|
Energy decomposition analysis of intermolecular interactions using a block-localized wave function approach
|
journal
|
April 2000 |
|
A five-site model for liquid water and the reproduction of the density anomaly by rigid, nonpolarizable potential functions
|
journal
|
May 2000 |
|
Electron distribution in water
|
journal
|
June 2000 |
|
Dielectric constant and low-frequency infrared spectra for liquid water and ice Ih within the E3B model
|
journal
|
August 2014 |
|
Quantum fluctuations and isotope effects in ab initio descriptions of water
|
journal
|
September 2014 |
|
2D-Raman-THz spectroscopy: A sensitive test of polarizable water models
|
journal
|
November 2014 |
|
An accurate and efficient computational protocol for obtaining the complete basis set limits of the binding energies of water clusters at the MP2 and CCSD(T) levels of theory: Application to (H 2 O) m , m = 2-6, 8, 11, 16, and 17
|
journal
|
June 2015 |
|
An efficient water force field calibrated against intermolecular THz and Raman spectra
|
journal
|
June 2018 |
|
Polarizable molecules in the vibrational spectroscopy of water
|
journal
|
August 2005 |
|
Unified description of temperature-dependent hydrogen-bond rearrangements in liquid water
|
journal
|
September 2005 |
|
Dissecting the THz spectrum of liquid water from first principles via correlations in time and space
|
journal
|
June 2010 |
|
Spatial correlation of dipole fluctuations in liquid water
|
journal
|
May 2007 |
|
Advances in molecular quantum chemistry contained in the Q-Chem 4 program package
|
journal
|
September 2014 |
|
Temperature and size dependence for Monte Carlo simulations of TIP4P water
|
journal
|
December 1985 |
|
A molecular dynamics study of polarizable water
|
journal
|
October 1989 |
|
The electrostatic properties of water molecules in condensed phases: an ab initio study
|
journal
|
June 1999 |
|
Canonical dynamics: Equilibrium phase-space distributions
|
journal
|
March 1985 |
|
Density-functional exchange-energy approximation with correct asymptotic behavior
|
journal
|
September 1988 |
|
Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density
|
journal
|
January 1988 |
|
Nuclear Quantum Effects in Water
|
journal
|
July 2008 |
|
Water Molecule Dipole in the Gas and in the Liquid Phase
|
journal
|
April 1999 |
|
Intermolecular Dynamical Charge Fluctuations in Water: A Signature of the H-Bond Network
|
journal
|
October 2005 |
|
Dipolar Correlations and the Dielectric Permittivity of Water
|
journal
|
June 2007 |
|
Formation of Cyclic Water Hexamer in Liquid Helium: The Smallest Piece of Ice
|
journal
|
January 2000 |
|
Atomic Dipole Moment Corrected Hirshfeld Population Method
|
journal
|
February 2012 |
|
Far-Infrared Spectrum of Liquid Water*
|
journal
|
January 1966 |
|
Measurements of the optical constants of liquid H_2O and D_2O between 6 and 450 cm^−1
|
journal
|
January 1977 |
|
Infrared Intensities of Liquids XX: The Intensity of the OH Stretching Band of Liquid Water Revisited, and the Best Current Values of the Optical Constants of H 2 O(l) at 25°C between 15,000 and 1 cm −1
|
journal
|
August 1996 |