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Title: Regional Mucosa-Associated Microbiota Determine Physiological Expression of TLR2 and TLR4 in Murine Colon

Abstract

Many colonic mucosal genes that are highly regulated by microbial signals are differentially expressed along the rostralcaudal axis. This would suggest that differences in regional microbiota exist, particularly mucosa-associated microbes that are less likely to be transient. We therefore explored this possibility by examining the bacterial populations associated with the normal proximal and distal colonic mucosa in context of host Toll-like receptors (TLR) expression in C57BL/6J mice housed in specific pathogen-free (SPF) and germ-free (GF) environments. 16S rRNA gene-based terminal restriction fragment length polymorphism (T-RFLP) and clone library analysis revealed significant differences in the community structure and diversity of the mucosa-associated microbiota located in the distal colon compared to proximal colon and stool, the latter two clustering closely. Differential expression of colonic TLR2 and TLR4 along the proximal-distal axis was also found in SPF mice, but not in GF mice, suggesting that enteric microbes are essential in maintaining the regional expression of these TLRs. TLR2 is more highly expressed in proximal colon and decreases in a gradient to distal while TLR4 expression is highest in distal colon and a gradient of decreased expression to proximal colon is observed. After transfaunation in GF mice, both regional colonization of mucosa-associated microbes andmore » expression of TLRs in the mouse colon were reestablished. In addition, exposure of the distal colon to cecal (proximal) microbiota induced TLR2 expression. These results demonstrate that regional colonic mucosa-associated microbiota determine the region-specific expression of TLR2 and TLR4. Conversely, region-specific host assembly rules are essential in determining the structure and function of mucosa-associated microbial populations. We believe this type of host-microbial mutualism is pivotal to the maintenance of intestinal and immune homeostasis.« less

Authors:
 [1];  [1];  [1];  [1];  [1];  [2];  [1];  [1]
  1. University of Chicago, IL (United States)
  2. University of Chicago, IL (United States); Argonne National Laboratory (ANL), Argonne, IL (United States)
Publication Date:
Research Org.:
Argonne National Laboratory (ANL), Argonne, IL (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER); University of Chicago; Crohns and Colitis Foundation of America
OSTI Identifier:
1627434
Grant/Contract Number:  
AC02-06CH11357; DK083993; HG004858; R37 DK47722; F31 AT006073-01
Resource Type:
Accepted Manuscript
Journal Name:
PLoS ONE
Additional Journal Information:
Journal Volume: 5; Journal Issue: 10; Journal ID: ISSN 1932-6203
Publisher:
Public Library of Science
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES; colon; gut bacteria; toll-like receptors; ribosomal RNA; polymerase chain reaction; gene expression; epithelial cells; bacteria

Citation Formats

Wang, Yunwei, Devkota, Suzanne, Musch, Mark W., Jabri, Bana, Nagler, Cathryn, Antonopoulos, Dionysios A., Chervonsky, Alexander, and Chang, Eugene B. Regional Mucosa-Associated Microbiota Determine Physiological Expression of TLR2 and TLR4 in Murine Colon. United States: N. p., 2010. Web. doi:10.1371/journal.pone.0013607.
Wang, Yunwei, Devkota, Suzanne, Musch, Mark W., Jabri, Bana, Nagler, Cathryn, Antonopoulos, Dionysios A., Chervonsky, Alexander, & Chang, Eugene B. Regional Mucosa-Associated Microbiota Determine Physiological Expression of TLR2 and TLR4 in Murine Colon. United States. https://doi.org/10.1371/journal.pone.0013607
Wang, Yunwei, Devkota, Suzanne, Musch, Mark W., Jabri, Bana, Nagler, Cathryn, Antonopoulos, Dionysios A., Chervonsky, Alexander, and Chang, Eugene B. Fri . "Regional Mucosa-Associated Microbiota Determine Physiological Expression of TLR2 and TLR4 in Murine Colon". United States. https://doi.org/10.1371/journal.pone.0013607. https://www.osti.gov/servlets/purl/1627434.
@article{osti_1627434,
title = {Regional Mucosa-Associated Microbiota Determine Physiological Expression of TLR2 and TLR4 in Murine Colon},
author = {Wang, Yunwei and Devkota, Suzanne and Musch, Mark W. and Jabri, Bana and Nagler, Cathryn and Antonopoulos, Dionysios A. and Chervonsky, Alexander and Chang, Eugene B.},
abstractNote = {Many colonic mucosal genes that are highly regulated by microbial signals are differentially expressed along the rostralcaudal axis. This would suggest that differences in regional microbiota exist, particularly mucosa-associated microbes that are less likely to be transient. We therefore explored this possibility by examining the bacterial populations associated with the normal proximal and distal colonic mucosa in context of host Toll-like receptors (TLR) expression in C57BL/6J mice housed in specific pathogen-free (SPF) and germ-free (GF) environments. 16S rRNA gene-based terminal restriction fragment length polymorphism (T-RFLP) and clone library analysis revealed significant differences in the community structure and diversity of the mucosa-associated microbiota located in the distal colon compared to proximal colon and stool, the latter two clustering closely. Differential expression of colonic TLR2 and TLR4 along the proximal-distal axis was also found in SPF mice, but not in GF mice, suggesting that enteric microbes are essential in maintaining the regional expression of these TLRs. TLR2 is more highly expressed in proximal colon and decreases in a gradient to distal while TLR4 expression is highest in distal colon and a gradient of decreased expression to proximal colon is observed. After transfaunation in GF mice, both regional colonization of mucosa-associated microbes and expression of TLRs in the mouse colon were reestablished. In addition, exposure of the distal colon to cecal (proximal) microbiota induced TLR2 expression. These results demonstrate that regional colonic mucosa-associated microbiota determine the region-specific expression of TLR2 and TLR4. Conversely, region-specific host assembly rules are essential in determining the structure and function of mucosa-associated microbial populations. We believe this type of host-microbial mutualism is pivotal to the maintenance of intestinal and immune homeostasis.},
doi = {10.1371/journal.pone.0013607},
journal = {PLoS ONE},
number = 10,
volume = 5,
place = {United States},
year = {Fri Oct 22 00:00:00 EDT 2010},
month = {Fri Oct 22 00:00:00 EDT 2010}
}

Works referenced in this record:

Bacterial colonization leads to the colonic secretion of RELMβ/FIZZ2, a novel goblet cell-specific protein
journal, November 2003


Multifaceted transcriptional regulation of the murine intestinal mucus layer by endogenous microbiota
journal, January 2008


16S rRNA gene-based analysis of fecal microbiota from preterm infants with and without necrotizing enterocolitis
journal, April 2009

  • Wang, Yunwei; Hoenig, Jeanette D.; Malin, Kathryn J.
  • The ISME Journal, Vol. 3, Issue 8
  • DOI: 10.1038/ismej.2009.37

Regulation of dextran sodium sulfate induced colitis by leukocyte beta 2 integrins
journal, April 2006

  • Abdelbaqi, Maisoun; Chidlow, John H.; Matthews, Kametra M.
  • Laboratory Investigation, Vol. 86, Issue 4
  • DOI: 10.1038/labinvest.3700398

Innate immunity and intestinal microbiota in the development of Type 1 diabetes
journal, September 2008

  • Wen, Li; Ley, Ruth E.; Volchkov, Pavel Yu.
  • Nature, Vol. 455, Issue 7216
  • DOI: 10.1038/nature07336

Obesity alters gut microbial ecology
journal, July 2005

  • Ley, R. E.; Backhed, F.; Turnbaugh, P.
  • Proceedings of the National Academy of Sciences, Vol. 102, Issue 31
  • DOI: 10.1073/pnas.0504978102

Gut flora, Toll-like receptors and nuclear receptors: a tripartite communication that tunes innate immunity in large intestine
journal, May 2008


Reversing Bacteria-induced Vitamin D Receptor Dysfunction Is Key to Autoimmune Disease
journal, September 2009


Commensal Host-Bacterial Relationships in the Gut
journal, May 2001


Host-Bacterial Mutualism in the Human Intestine
journal, March 2005


Diversity of the Human Intestinal Microbial Flora
journal, June 2005


Molecular Analysis of Commensal Host-Microbial Relationships in the Intestine
journal, February 2001


Mucosa-Associated Bacteria in the Human Gastrointestinal Tract Are Uniformly Distributed along the Colon and Differ from the Community Recovered from Feces
journal, July 2002


Aggregating Phenotype in Lactobacillus crispatus Determines Intestinal Colonization and TLR2 and TLR4 Modulation in Murine Colonic Mucosa
journal, September 2007

  • Voltan, Sandra; Castagliuolo, Ignazio; Elli, Marina
  • Clinical and Vaccine Immunology, Vol. 14, Issue 9
  • DOI: 10.1128/cvi.00079-07

H OW H OST -M ICROBIAL I NTERACTIONS S HAPE THE N UTRIENT E NVIRONMENT OF THE M AMMALIAN I NTESTINE
journal, July 2002


Inflammation-induced, 3′UTR-dependent translational inhibition of Hsp70 mRNA impairs intestinal homeostasis
journal, May 2009

  • Hu, Shien; Zhu, Xiaorong; Triggs, Joseph R.
  • American Journal of Physiology-Gastrointestinal and Liver Physiology, Vol. 296, Issue 5
  • DOI: 10.1152/ajpgi.00027.2009

PECAM-1 (CD 31) mediates transendothelial leukocyte migration in experimental colitis
journal, August 2007

  • Rijcken, Emile; Mennigen, Rudolf B.; Schaefer, Sebastian D.
  • American Journal of Physiology-Gastrointestinal and Liver Physiology, Vol. 293, Issue 2
  • DOI: 10.1152/ajpgi.00097.2007

Luminal bacterial flora determines physiological expression of intestinal epithelial cytoprotective heat shock proteins 25 and 72
journal, April 2005

  • Arvans, Donna L.; Vavricka, Stephan R.; Ren, Hongyu
  • American Journal of Physiology-Gastrointestinal and Liver Physiology, Vol. 288, Issue 4
  • DOI: 10.1152/ajpgi.00206.2004

Novel role of the vitamin D receptor in maintaining the integrity of the intestinal mucosal barrier
journal, January 2008

  • Kong, Juan; Zhang, Zhongyi; Musch, Mark W.
  • American Journal of Physiology-Gastrointestinal and Liver Physiology, Vol. 294, Issue 1
  • DOI: 10.1152/ajpgi.00398.2007

Differential expression, distribution, and function of PPAR-γ in the proximal and distal colon
journal, August 2007


Smad3 Deficiency Promotes Tumorigenesis in the Distal Colon of ApcMin/+ Mice
journal, September 2006


Toll-Like Receptor 2 (TLR2) Plays a Major Role in Innate Resistance in the Lung against Murine Mycoplasma
journal, May 2010


Enteroendocrine cells express functional Toll-like receptors
text, January 2007

  • Huabao, Xiong,; F., Mayer, Lloyd; S., Tilstra, Jeremy
  • The University of North Carolina at Chapel Hill University Libraries
  • DOI: 10.17615/xtx4-e930

Strategic Compartmentalization of Toll-Like Receptor 4 in the Mouse Gut
journal, April 2003

  • Ortega-Cava, Cesar F.; Ishihara, Shunji; Rumi, Mohammad A. K.
  • The Journal of Immunology, Vol. 170, Issue 8
  • DOI: 10.4049/jimmunol.170.8.3977

Works referencing / citing this record:

Comparative analyses of foregut and hindgut bacterial communities in hoatzins and cows
journal, September 2011

  • Godoy-Vitorino, Filipa; Goldfarb, Katherine C.; Karaoz, Ulas
  • The ISME Journal, Vol. 6, Issue 3
  • DOI: 10.1038/ismej.2011.131

Distinct commensal bacteria associated with ingesta and mucosal epithelium in the gastrointestinal tracts of calves and chickens
journal, November 2011


Colonic patch and colonic SILT development are independent and differentially regulated events
journal, May 2013

  • Baptista, A. P.; Olivier, B. J.; Goverse, G.
  • Mucosal Immunology, Vol. 6, Issue 3
  • DOI: 10.1038/mi.2012.90

Physiology of Electrolyte Transport in the Gut: Implications for Disease
book, January 2019


Taxonomic Identification of Commensal Bacteria Associated with the Mucosa and Digesta throughout the Gastrointestinal Tracts of Preweaned Calves
journal, March 2014

  • Malmuthuge, Nilusha; Griebel, Philip J.; Guan, Le Luo
  • Applied and Environmental Microbiology, Vol. 80, Issue 6
  • DOI: 10.1128/aem.03864-13

Comparative Analysis of Ileal and Cecal Microbiota in Aged Rats
journal, June 2018


Impact of the Gut Microbiota on Intestinal Immunity Mediated by Tryptophan Metabolism
journal, February 2018

  • Gao, Jing; Xu, Kang; Liu, Hongnan
  • Frontiers in Cellular and Infection Microbiology, Vol. 8
  • DOI: 10.3389/fcimb.2018.00013

TLR2 and TLR4 interact with sulfide system in the modulation of mouse colonic motility
journal, May 2019

  • Grasa, Laura; Abecia, Leticia; Peña‐Cearra, Ainize
  • Neurogastroenterology & Motility, Vol. 31, Issue 9
  • DOI: 10.1111/nmo.13648

Hibernation alters the diversity and composition of mucosa-associated bacteria while enhancing antimicrobial defence in the gut of 13-lined ground squirrels
journal, September 2014

  • Dill-McFarland, Kimberly A.; Neil, Katie L.; Zeng, Austin
  • Molecular Ecology, Vol. 23, Issue 18
  • DOI: 10.1111/mec.12884

Gut biogeography of the bacterial microbiota
journal, October 2015

  • Donaldson, Gregory P.; Lee, S. Melanie; Mazmanian, Sarkis K.
  • Nature Reviews Microbiology, Vol. 14, Issue 1
  • DOI: 10.1038/nrmicro3552

Toll-like receptors 2 and 4 modulate intestinal IL-10 differently in ileum and colon
journal, August 2017

  • Latorre, Eva; Layunta, Elena; Grasa, Laura
  • United European Gastroenterology Journal, Vol. 6, Issue 3
  • DOI: 10.1177/2050640617727180

Regional specialization within the intestinal immune system
journal, September 2014

  • Mowat, Allan M.; Agace, William W.
  • Nature Reviews Immunology, Vol. 14, Issue 10
  • DOI: 10.1038/nri3738

Toll-like receptors and diabetes: a therapeutic perspective
journal, October 2011

  • Dasu, Mohan R.; Ramirez, Sandra; Isseroff, Roslyn R.
  • Clinical Science, Vol. 122, Issue 5
  • DOI: 10.1042/cs20110357

Dietary-fat-induced taurocholic acid promotes pathobiont expansion and colitis in Il10−/− mice
journal, June 2012

  • Devkota, Suzanne; Wang, Yunwei; Musch, Mark W.
  • Nature, Vol. 487, Issue 7405
  • DOI: 10.1038/nature11225

Standard Colonic Lavage Alters the Natural State of Mucosal-Associated Microbiota in the Human Colon
journal, February 2012


Inflammation-associated enterotypes, host genotype, cage and inter-individual effects drive gut microbiota variation in common laboratory mice
journal, January 2013

  • Hildebrand, Falk; Nguyen, Thi Loan Anh; Brinkman, Brigitta
  • Genome Biology, Vol. 14, Issue 1
  • DOI: 10.1186/gb-2013-14-1-r4

Bacterial Biogeography of the Colon in Dogs With Chronic Inflammatory Enteropathy
journal, January 2020

  • Giaretta, Paula R.; Suchodolski, Jan S.; Jergens, Albert E.
  • Veterinary Pathology, Vol. 57, Issue 2
  • DOI: 10.1177/0300985819891259

Taxonomic Identification of Ruminal Epithelial Bacterial Diversity during Rumen Development in Goats
journal, March 2015

  • Jiao, Jinzhen; Huang, Jinyu; Zhou, Chuanshe
  • Applied and Environmental Microbiology, Vol. 81, Issue 10
  • DOI: 10.1128/aem.00203-15

TLR‐2, TLR‐4 and MyD88 genes expression in renal transplant acute and chronic rejections
journal, July 2019

  • Sharbafi, Mohammad Hossein; Assadiasl, Sara; Pour‐reza‐gholi, Fatemeh
  • International Journal of Immunogenetics, Vol. 46, Issue 6
  • DOI: 10.1111/iji.12446

Close association between intestinal microbiota and irritable bowel syndrome
journal, August 2017

  • Fan, W. -T.; Ding, C.; Xu, N. -N.
  • European Journal of Clinical Microbiology & Infectious Diseases, Vol. 36, Issue 12
  • DOI: 10.1007/s10096-017-3060-2

Microbiota profile in new-onset pediatric Crohn’s disease: data from a non-Western population
journal, November 2018

  • El Mouzan, Mohammad I.; Winter, Harland S.; Assiri, Assad A.
  • Gut Pathogens, Vol. 10, Issue 1
  • DOI: 10.1186/s13099-018-0276-3

Comparison of the fecal, cecal, and mucus microbiome in male and female mice after TNBS-induced colitis
journal, November 2019


Intestinal microbiota in human health and disease: the impact of probiotics
journal, May 2011


Core 1– and 3–derived O-glycans collectively maintain the colonic mucus barrier and protect against spontaneous colitis in mice
journal, May 2016

  • Bergstrom, K.; Fu, J.; Johansson, M. E. V.
  • Mucosal Immunology, Vol. 10, Issue 1
  • DOI: 10.1038/mi.2016.45

Nutrients Mediate Intestinal Bacteria–Mucosal Immune Crosstalk
journal, January 2018


Expression of TLR2 and TLR4 in murine small intestine during postnatal development
journal, February 2017

  • Inoue, Ryo; Yajima, Takaji; Tsukahara, Takamitsu
  • Bioscience, Biotechnology, and Biochemistry, Vol. 81, Issue 2
  • DOI: 10.1080/09168451.2016.1254534

DNA methylation-associated colonic mucosal immune and defense responses in treatment-naïve pediatric ulcerative colitis
journal, May 2014

  • Harris, R. Alan; Nagy-Szakal, Dorottya; Mir, Sabina AV
  • Epigenetics, Vol. 9, Issue 8
  • DOI: 10.4161/epi.29446

Prebiotics to Fight Diseases: Reality or Fiction?: PREBIOTICS COUNTERACT DISEASES
journal, December 2012

  • Di Bartolomeo, F.; Startek, J. B.; Van den Ende, W.
  • Phytotherapy Research, Vol. 27, Issue 10
  • DOI: 10.1002/ptr.4901

Oral exposure to environmental pollutant benzo[a]pyrene impacts the intestinal epithelium and induces gut microbial shifts in murine model
journal, August 2016

  • Ribière, Céline; Peyret, Pierre; Parisot, Nicolas
  • Scientific Reports, Vol. 6, Issue 1
  • DOI: 10.1038/srep31027

Interleukin-15 promotes intestinal dysbiosis with butyrate deficiency associated with increased susceptibility to colitis
journal, September 2016

  • Meisel, Marlies; Mayassi, Toufic; Fehlner-Peach, Hannah
  • The ISME Journal, Vol. 11, Issue 1
  • DOI: 10.1038/ismej.2016.114

Antibiotic Treatment Suppresses Rotavirus Infection and Enhances Specific Humoral Immunity
journal, January 2014

  • Uchiyama, Robin; Chassaing, Benoit; Zhang, Benyue
  • The Journal of Infectious Diseases, Vol. 210, Issue 2
  • DOI: 10.1093/infdis/jiu037

Microorganisms, Tryptophan Metabolism, and Kynurenine Pathway: A Complex Interconnected Loop Influencing Human Health Status
journal, January 2019

  • Dehhaghi, Mona; Kazemi Shariat Panahi, Hamed; Guillemin, Gilles J.
  • International Journal of Tryptophan Research, Vol. 12
  • DOI: 10.1177/1178646919852996

Intestinal microbiota in human health and disease: the impact of probiotics
journal, May 2011


Intestinal Dysbiosis Contributes to the Delayed Gastrointestinal Transit in High-Fat Diet Fed Mice
journal, May 2016

  • Anitha, Mallappa; Reichardt, François; Tabatabavakili, Sahar
  • Cellular and Molecular Gastroenterology and Hepatology, Vol. 2, Issue 3
  • DOI: 10.1016/j.jcmgh.2015.12.008

Core 1– and 3–derived O-glycans collectively maintain the colonic mucus barrier and protect against spontaneous colitis in mice
journal, May 2016

  • Bergstrom, K.; Fu, J.; Johansson, M. E. V.
  • Mucosal Immunology, Vol. 10, Issue 1
  • DOI: 10.1038/mi.2016.45

Oral exposure to environmental pollutant benzo[a]pyrene impacts the intestinal epithelium and induces gut microbial shifts in murine model
journal, August 2016

  • Ribière, Céline; Peyret, Pierre; Parisot, Nicolas
  • Scientific Reports, Vol. 6, Issue 1
  • DOI: 10.1038/srep31027

Do bugs define cancer geography?
journal, March 2014


Intestinal Epithelial Toll-Like Receptor 4 Signaling Affects Epithelial Function and Colonic Microbiota and Promotes a Risk for Transmissible Colitis
journal, March 2016

  • Dheer, Rishu; Santaolalla, Rebeca; Davies, Julie M.
  • Infection and Immunity, Vol. 84, Issue 3
  • DOI: 10.1128/iai.01374-15

Heterogeneity of colon cancer: from bench to bedside
journal, January 2017


American ginseng suppresses Western diet-promoted tumorigenesis in model of inflammation-associated colon cancer: role of EGFR
journal, November 2011

  • Dougherty, Urszula; Mustafi, Reba; Wang, Yunwei
  • BMC Complementary and Alternative Medicine, Vol. 11, Issue 1
  • DOI: 10.1186/1472-6882-11-111

Inflammation-associated enterotypes, host genotype, cage and inter-individual effects drive gut microbiota variation in common laboratory mice
journal, January 2013

  • Hildebrand, Falk; Nguyen, Thi Loan Anh; Brinkman, Brigitta
  • Genome Biology, Vol. 14, Issue 1
  • DOI: 10.1186/gb-2013-14-1-r4

Microbiota profile in new-onset pediatric Crohn’s disease: data from a non-Western population
journal, November 2018

  • El Mouzan, Mohammad I.; Winter, Harland S.; Assiri, Assad A.
  • Gut Pathogens, Vol. 10, Issue 1
  • DOI: 10.1186/s13099-018-0276-3

Standard Colonic Lavage Alters the Natural State of Mucosal-Associated Microbiota in the Human Colon
journal, February 2012


Comparison of the fecal, cecal, and mucus microbiome in male and female mice after TNBS-induced colitis
journal, November 2019


Comparative Analysis of Ileal and Cecal Microbiota in Aged Rats
journal, June 2018


Impact of the Gut Microbiota on Intestinal Immunity Mediated by Tryptophan Metabolism
journal, February 2018

  • Gao, Jing; Xu, Kang; Liu, Hongnan
  • Frontiers in Cellular and Infection Microbiology, Vol. 8
  • DOI: 10.3389/fcimb.2018.00013

Nutrients Mediate Intestinal Bacteria–Mucosal Immune Crosstalk
journal, January 2018


Impact of Exercise on Innate Immunity in Multiple Sclerosis Progression and Symptomatology
journal, June 2016


DNA methylation-associated colonic mucosal immune and defense responses in treatment-naïve pediatric ulcerative colitis
journal, May 2014

  • Harris, R. Alan; Nagy-Szakal, Dorottya; Mir, Sabina AV
  • Epigenetics, Vol. 9, Issue 8
  • DOI: 10.4161/epi.29446