Genome sequence of the model rice variety KitaakeX

Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang; Chern, Mawsheng; Martin, Joel A.; Copetti, Dario; Duong, Phat Q.; Pham, Nikki T.; Kudrna, David A.; Talag, Jayson; Schackwitz, Wendy S.; Lipzen, Anna M.; Dilworth, David; Bauer, Diane; Grimwood, Jane; Nelson, Catherine R.; Xing, Feng; Xie, Weibo; Barry, Kerrie W.; Wing, Rod A.; Schmutz, Jeremy; Li, Guotian; Ronald, Pamela C.

doi:10.1186/s12864-019-6262-4

Title: Genome sequence of the model rice variety KitaakeX

Journal Article · 27 November 2019 · BMC Genomics

DOI: https://doi.org/10.1186/s12864-019-6262-4 · OSTI ID:1618575

Jain, Rashmi ^[1]; Jenkins, Jerry ^[2]; Shu, Shengqiang ^[3]; Chern, Mawsheng ^[1]; Martin, Joel A. ^[3]; Copetti, Dario ^[4]; Duong, Phat Q. ^[1]; Pham, Nikki T. ^[5]; Kudrna, David A. ^[6]; Talag, Jayson ^[6]; Schackwitz, Wendy S. ^[3]; Lipzen, Anna M. ^[3]; Dilworth, David ^[3]; Bauer, Diane ^[3]; Grimwood, Jane ^[2]; Nelson, Catherine R. ^[5]; Xing, Feng ^[7]; Xie, Weibo ^[7]; Barry, Kerrie W. ^[3]; Wing, Rod A. ^[8] more »

Univ. of California, Davis, CA (United States); Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Joint BioEnergy Inst.
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); HudsonAlpha Inst. for Biotechnology, Huntsville, AL (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
Univ. of Arizona, Tucson, AZ (United States); ETH Zurich (Switzerland); Univ. of Zurich (Switzerland)
Univ. of California, Davis, CA (United States)
Univ. of Arizona, Tucson, AZ (United States)
Huazhong Agricultural Univ., Wuhan (China)
Univ. of Arizona, Tucson, AZ (United States); Genetic Resource Center, Los Baños, Laguna (Philippines). International Rice Research Inst.
Univ. of California, Davis, CA (United States); Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Joint BioEnergy Inst.; Huazhong Agricultural Univ. Wuhan, Hubei (China)

The availability of thousands of complete rice genome sequences from diverse varieties and accessions has laid the foundation for in-depth exploration of the rice genome. One drawback to these collections is that most of these rice varieties have long life cycles, and/or low transformation efficiencies, which limits their usefulness as model organisms for functional genomics studies. In contrast, the rice variety Kitaake has a rapid life cycle (9 weeks seed to seed) and is easy to transform and propagate. For these reasons, Kitaake has emerged as a model for studies of diverse monocotyledonous species. Here, we report the de novo genome sequencing and analysis of Oryza sativa ssp. japonica variety KitaakeX, a Kitaake plant carrying the rice XA21 immune receptor. Our KitaakeX sequence assembly contains 377.6 Mb, consisting of 33 scaffolds (476 contigs) with a contig N50 of 1.4 Mb. Complementing the assembly are detailed gene annotations of 35,594 protein coding genes. We identified 331,335 genomic variations between KitaakeX and Nipponbare (ssp. japonica), and 2,785,991 variations between KitaakeX and Zhenshan97 (ssp. indica). We also compared Kitaake resequencing reads to the KitaakeX assembly and identified 219 small variations. The high-quality genome of the model rice plant KitaakeX will accelerate rice functional genomics. The high quality, de novo assembly of the KitaakeX genome will serve as a useful reference genome for rice and will accelerate functional genomics studies of rice and other species.

View Journal Article

Cite

Export

Save

Research Organization:: Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States); USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER); National Institutes of Health (NIH); National Science Foundation (NSF); USDOE

Grant/Contract Number:: AC02-05CH11231; GM59962; GM122968; IOS-1237975

OSTI ID:: 1618575

Alternate ID(s):: OSTI ID: 1582348

Journal Information:: BMC Genomics, Vol. 20, Issue 1; ISSN 1471-2164

Publisher:: SpringerCopyright Statement

Country of Publication:: United States

Language:: English

References (69)

The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs Schattner, P.; Brooks, A. N.; Lowe, T. M. Nucleic Acids Research, Vol. 33, Issue Web Server https://doi.org/10.1093/nar/gki366	journal	July 2005
Plant and Animal Sensors of Conserved Microbial Signatures Ronald, P. C.; Beutler, B. Science, Vol. 330, Issue 6007 https://doi.org/10.1126/science.1189468	journal	November 2010
Versatile and open software for comparing large genomes Kurtz, Stefan; Phillippy, Adam; Delcher, Arthur L. Genome Biology, Vol. 5, Issue 2, R12 https://doi.org/10.1186/gb-2004-5-2-r12	journal	January 2004
A large-scale whole-genome sequencing analysis reveals highly specific genome editing by both Cas9 and Cpf1 (Cas12a) nucleases in rice Tang, Xu; Liu, Guanqing; Zhou, Jianping Genome Biology, Vol. 19, Issue 1 https://doi.org/10.1186/s13059-018-1458-5	journal	July 2018
The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication Wang, Muhua; Yu, Yeisoo; Haberer, Georg Nature Genetics, Vol. 46, Issue 9 https://doi.org/10.1038/ng.3044	journal	July 2014
Loss of function of a rice TPR-domain RNA-binding protein confers broad-spectrum disease resistance Zhou, Xiaogang; Liao, Haicheng; Chern, Mawsheng Proceedings of the National Academy of Sciences, Vol. 115, Issue 12 https://doi.org/10.1073/pnas.1705927115	journal	February 2018
BLAT---The BLAST-Like Alignment Tool Kent, W. J. Genome Research, Vol. 12, Issue 4 https://doi.org/10.1101/gr.229202	journal	March 2002
RiceVarMap: a comprehensive database of rice genomic variations Zhao, Hu; Yao, Wen; Ouyang, Yidan Nucleic Acids Research, Vol. 43, Issue D1 https://doi.org/10.1093/nar/gku894	journal	October 2014
High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development Daccord, Nicolas; Celton, Jean-Marc; Linsmith, Gareth Nature Genetics, Vol. 49, Issue 7 https://doi.org/10.1038/ng.3886	journal	June 2017
KEGG: new perspectives on genomes, pathways, diseases and drugs Kanehisa, Minoru; Furumichi, Miho; Tanabe, Mao Nucleic Acids Research, Vol. 45, Issue D1 https://doi.org/10.1093/nar/gkw1092	journal	November 2016
Days to heading 7 , a major quantitative locus determining photoperiod sensitivity and regional adaptation in rice Gao, He; Jin, Mingna; Zheng, Xiao-Ming Proceedings of the National Academy of Sciences, Vol. 111, Issue 46 https://doi.org/10.1073/pnas.1418204111	journal	November 2014
A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica) Yu, Jun Science, Vol. 296, Issue 5565, p. 79-92 https://doi.org/10.1126/science.1068037	journal	April 2002
Circos: An information aesthetic for comparative genomics Krzywinski, M.; Schein, J.; Birol, I. Genome Research, Vol. 19, Issue 9 https://doi.org/10.1101/gr.092759.109	journal	June 2009
Ancestral genome duplication in rice Guyot, Romain; Keller, Beat Genome, Vol. 47, Issue 3 https://doi.org/10.1139/g04-016	journal	June 2004
A Receptor Kinase-Like Protein Encoded by the Rice Disease Resistance Gene, Xa21 Song, W. -Y.; Wang, G. -L.; Chen, L. -L. Science, Vol. 270, Issue 5243 https://doi.org/10.1126/science.270.5243.1804	journal	December 1995
Considering Transposable Element Diversification in De Novo Annotation Approaches Flutre, Timothée; Duprat, Elodie; Feuillet, Catherine PLoS ONE, Vol. 6, Issue 1 https://doi.org/10.1371/journal.pone.0016526	journal	January 2011
Genome-Wide Sequencing of 41 Rice (Oryza sativa L.) Mutated Lines Reveals Diverse Mutations Induced by Fast-Neutron Irradiation Li, Guotian; Chern, Mawsheng; Jain, Rashmi Molecular Plant, Vol. 9, Issue 7 https://doi.org/10.1016/j.molp.2016.03.009	journal	July 2016
Ehd4 Encodes a Novel and Oryza-Genus-Specific Regulator of Photoperiodic Flowering in Rice Gao, He; Zheng, Xiao-Ming; Fei, Guilin PLoS Genetics, Vol. 9, Issue 2 https://doi.org/10.1371/journal.pgen.1003281	journal	February 2013
Extensive sequence divergence between the reference genomes of two elite indica rice varieties Zhenshan 97 and Minghui 63 Zhang, Jianwei; Chen, Ling-Ling; Xing, Feng Proceedings of the National Academy of Sciences, Vol. 113, Issue 35 https://doi.org/10.1073/pnas.1611012113	journal	August 2016
A gene cluster encoding lectin receptor kinases confers broad-spectrum and durable insect resistance in rice Liu, Yuqiang; Wu, Han; Chen, Hong Nature Biotechnology, Vol. 33, Issue 3 https://doi.org/10.1038/nbt.3069	journal	December 2014
Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system Xie, Kabin; Minkenberg, Bastian; Yang, Yinong Proceedings of the National Academy of Sciences, Vol. 112, Issue 11 https://doi.org/10.1073/pnas.1420294112	journal	March 2015
InterPro in 2017—beyond protein family and domain annotations Finn, Robert D.; Attwood, Teresa K.; Babbitt, Patricia C. Nucleic Acids Research, Vol. 45, Issue D1 https://doi.org/10.1093/nar/gkw1107	journal	November 2016
Rfam 12.0: updates to the RNA families database Nawrocki, Eric P.; Burge, Sarah W.; Bateman, Alex Nucleic Acids Research, Vol. 43, Issue D1 https://doi.org/10.1093/nar/gku1063	journal	November 2014
Sequencing and de novo assembly of a near complete indica rice genome Du, Huilong; Yu, Ying; Ma, Yanfei Nature Communications, Vol. 8, Issue 1 https://doi.org/10.1038/ncomms15324	journal	May 2017
Construction of a genomewide RNAi mutant library in rice Wang, Lei; Zheng, Jie; Luo, Yanzhong Plant Biotechnology Journal, Vol. 11, Issue 8 https://doi.org/10.1111/pbi.12093	journal	August 2013
The Sequences of 1504 Mutants in the Model Rice Variety Kitaake Facilitate Rapid Functional Genomic Studies Li, Guotian; Jain, Rashmi; Chern, Mawsheng The Plant Cell, Vol. 29, Issue 6 https://doi.org/10.1105/tpc.17.00154	journal	June 2017
A gene ontology inferred from molecular networks Dutkowski, Janusz; Kramer, Michael; Surma, Michal A. Nature Biotechnology, Vol. 31, Issue 1 https://doi.org/10.1038/nbt.2463	journal	December 2012
The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000 Bairoch, A. Nucleic Acids Research, Vol. 28, Issue 1 https://doi.org/10.1093/nar/28.1.45	journal	January 2000
Towards a better bowl of rice: assigning function to tens of thousands of rice genes Jung, Ki-Hong; An, Gynheung; Ronald, Pamela C. Nature Reviews Genetics, Vol. 9, Issue 2 https://doi.org/10.1038/nrg2286	journal	February 2008
Imprinted expression of genes and small RNA is associated with localized hypomethylation of the maternal genome in rice endosperm Rodrigues, J. A.; Ruan, R.; Nishimura, T. Proceedings of the National Academy of Sciences, Vol. 110, Issue 19 https://doi.org/10.1073/pnas.1306164110	journal	April 2013
Analysis of the early-flowering mechanisms and generation of T-DNA tagging lines in Kitaake, a model rice cultivar Kim, Song Lim; Choi, Minkyung; Jung, Ki-Hong Journal of Experimental Botany, Vol. 64, Issue 14 https://doi.org/10.1093/jxb/ert226	journal	August 2013
Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data Kawahara, Yoshihiro; de la Bastide, Melissa; Hamilton, John P. Rice, Vol. 6, Issue 1 https://doi.org/10.1186/1939-8433-6-4	journal	January 2013
Archaeological and genetic insights into the origins of domesticated rice Gross, B. L.; Zhao, Z. Proceedings of the National Academy of Sciences, Vol. 111, Issue 17 https://doi.org/10.1073/pnas.1308942110	journal	April 2014
High-efficiency TALEN-based gene editing produces disease-resistant rice Li, Ting; Liu, Bo; Spalding, Martin H. Nature Biotechnology, Vol. 30, Issue 5 https://doi.org/10.1038/nbt.2199	journal	May 2012
APE: Analyses of Phylogenetics and Evolution in R language Paradis, E.; Claude, J.; Strimmer, K. Bioinformatics, Vol. 20, Issue 2 https://doi.org/10.1093/bioinformatics/btg412	journal	January 2004
Genomic variation in 3,010 diverse accessions of Asian cultivated rice Wang, Wensheng; Mauleon, Ramil; Hu, Zhiqiang Nature, Vol. 557, Issue 7703 https://doi.org/10.1038/s41586-018-0063-9	journal	April 2018
Infernal 1.1: 100-fold faster RNA homology searches Nawrocki, E. P.; Eddy, S. R. Bioinformatics, Vol. 29, Issue 22 https://doi.org/10.1093/bioinformatics/btt509	journal	September 2013
RiTE database: a resource database for genus-wide rice genomics and evolutionary biology Copetti, Dario; Zhang, Jianwei; El Baidouri, Moaine BMC Genomics, Vol. 16, Issue 1 https://doi.org/10.1186/s12864-015-1762-3	journal	July 2015
Transgenic Expression of the Dicotyledonous Pattern Recognition Receptor EFR in Rice Leads to Ligand-Dependent Activation of Defense Responses Schwessinger, Benjamin; Bahar, Ofir; Thomas, Nicolas PLOS Pathogens, Vol. 11, Issue 3 https://doi.org/10.1371/journal.ppat.1004809	journal	March 2015
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w Cingolani, Pablo; Platts, Adrian; Wang, Le Lily Fly, Vol. 6, Issue 2 https://doi.org/10.4161/fly.19695	journal	April 2012
inStrain profiles population microdiversity from metagenomic data and sensitively detects shared microbial strains Olm, Matthew R.; Crits-Christoph, Alexander; Bouma-Gregson, Keith Nature Biotechnology, Vol. 39, Issue 6 https://doi.org/10.1038/s41587-020-00797-0	journal	January 2021
Draft Genome Sequence of Medusavirus Stheno, Isolated from the Tatakai River of Uji, Japan Yoshida, Koki; Zhang, Ruixuan; Garcia, Kimberly G. Microbiology Resource Announcements, Vol. 10, Issue 1 https://doi.org/10.1128/mra.01323-20	journal	January 2021
Comparison of 15 dinoflagellate genomes reveals extensive sequence and structural divergence in family Symbiodiniaceae and genus Symbiodinium González-Pech, Raúl A.; Stephens, Timothy G.; Chen, Yibi BMC Biology, Vol. 19, Issue 1 https://doi.org/10.1186/s12915-021-00994-6	journal	April 2021
RiTE database: a resource database for genus-wide rice genomics and evolutionary biology Dario, Copetti,; Jianwei, Zhang,; Moaine, El Baidouri, BioMed Central https://doi.org/10.5167/uzh-121318	text	January 2015
A genome-wide association study reveals that the cytochrome b5 involved in seed reserve mobilization during seed germination in rice Huang, Zhibo; Ying, Jifeng; Peng, Liling Theoretical and Applied Genetics, Vol. 134, Issue 12 https://doi.org/10.1007/s00122-021-03948-2	journal	September 2021
Evidence for an association of interferon gene variants with sudden infant death syndrome Hafke, Angelina; Schürmann, Peter; Rothämel, Thomas International Journal of Legal Medicine, Vol. 133, Issue 3 https://doi.org/10.1007/s00414-018-1974-6	journal	January 2019
Genome-Wide Sequencing of 41 Rice (Oryza sativa L.) Mutated Lines Reveals Diverse Mutations Induced by Fast-Neutron Irradiation Li, Guotian; Chern, Mawsheng; Jain, Rashmi Molecular Plant, Vol. 9, Issue 7 https://doi.org/10.1016/j.molp.2016.03.009	journal	July 2016
Towards a better bowl of rice: assigning function to tens of thousands of rice genes Jung, Ki-Hong; An, Gynheung; Ronald, Pamela C. Nature Reviews Genetics, Vol. 9, Issue 2 https://doi.org/10.1038/nrg2286	journal	February 2008
Targeted introduction of heritable point mutations into the plant mitochondrial genome Forner, Joachim; Kleinschmidt, Dennis; Meyer, Etienne H. Nature Plants, Vol. 8, Issue 3 https://doi.org/10.1038/s41477-022-01108-y	journal	March 2022
Genomic variation in 3,010 diverse accessions of Asian cultivated rice Wang, Wensheng; Mauleon, Ramil; Hu, Zhiqiang Nature, Vol. 557, Issue 7703 https://doi.org/10.1038/s41586-018-0063-9	journal	April 2018
Imprinted expression of genes and small RNA is associated with localized hypomethylation of the maternal genome in rice endosperm Rodrigues, J. A.; Ruan, R.; Nishimura, T. Proceedings of the National Academy of Sciences, Vol. 110, Issue 19 https://doi.org/10.1073/pnas.1306164110	journal	April 2013
Archaeological and genetic insights into the origins of domesticated rice Gross, B. L.; Zhao, Z. Proceedings of the National Academy of Sciences, Vol. 111, Issue 17 https://doi.org/10.1073/pnas.1308942110	journal	April 2014
Loss of function of a rice TPR-domain RNA-binding protein confers broad-spectrum disease resistance Zhou, Xiaogang; Liao, Haicheng; Chern, Mawsheng Proceedings of the National Academy of Sciences, Vol. 115, Issue 12 https://doi.org/10.1073/pnas.1705927115	journal	February 2018
APE: Analyses of Phylogenetics and Evolution in R language Paradis, E.; Claude, J.; Strimmer, K. Bioinformatics, Vol. 20, Issue 2 https://doi.org/10.1093/bioinformatics/btg412	journal	January 2004
Analysis of the early-flowering mechanisms and generation of T-DNA tagging lines in Kitaake, a model rice cultivar Kim, Song Lim; Choi, Minkyung; Jung, Ki-Hong Journal of Experimental Botany, Vol. 64, Issue 14 https://doi.org/10.1093/jxb/ert226	journal	August 2013
The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000 Bairoch, A. Nucleic Acids Research, Vol. 28, Issue 1 https://doi.org/10.1093/nar/28.1.45	journal	January 2000
The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs Schattner, P.; Brooks, A. N.; Lowe, T. M. Nucleic Acids Research, Vol. 33, Issue Web Server https://doi.org/10.1093/nar/gki366	journal	July 2005
Rfam 12.0: updates to the RNA families database Nawrocki, Eric P.; Burge, Sarah W.; Bateman, Alex Nucleic Acids Research, Vol. 43, Issue D1 https://doi.org/10.1093/nar/gku1063	journal	November 2014
InterPro in 2017—beyond protein family and domain annotations Finn, Robert D.; Attwood, Teresa K.; Babbitt, Patricia C. Nucleic Acids Research, Vol. 45, Issue D1 https://doi.org/10.1093/nar/gkw1107	journal	November 2016
Construction of a genomewide RNAi mutant library in rice Wang, Lei; Zheng, Jie; Luo, Yanzhong Plant Biotechnology Journal, Vol. 11, Issue 8 https://doi.org/10.1111/pbi.12093	journal	August 2013
A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica) Yu, Jun Science, Vol. 296, Issue 5565, p. 79-92 https://doi.org/10.1126/science.1068037	journal	April 2002
A Receptor Kinase-Like Protein Encoded by the Rice Disease Resistance Gene, Xa21 Song, W. -Y.; Wang, G. -L.; Chen, L. -L. Science, Vol. 270, Issue 5243 https://doi.org/10.1126/science.270.5243.1804	journal	December 1995
Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data Kawahara, Yoshihiro; de la Bastide, Melissa; Hamilton, John P. Rice, Vol. 6, Issue 1 https://doi.org/10.1186/1939-8433-6-4	journal	January 2013
RiTE database: a resource database for genus-wide rice genomics and evolutionary biology Copetti, Dario; Zhang, Jianwei; El Baidouri, Moaine BMC Genomics, Vol. 16, Issue 1 https://doi.org/10.1186/s12864-015-1762-3	journal	July 2015
Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica Schatz, Michael C.; Maron, Lyza G.; Stein, Joshua C. Genome Biology, Vol. 15, Issue 11 https://doi.org/10.1186/s13059-014-0506-z	journal	November 2014
Photoperiod Sensitivity Gene of Se-1 Locus Found in Photoperiod Insensitive Rice Cultivars of the Northern Limit Region of Rice Cultivation Ichitani, Katsuyuki; Okumoto, Yutaka; Tanisaka, Takatoshi Ikushugaku zasshi, Vol. 47, Issue 2 https://doi.org/10.1270/jsbbs1951.47.145	journal	January 1997
Ehd4 Encodes a Novel and Oryza-Genus-Specific Regulator of Photoperiodic Flowering in Rice Gao, He; Zheng, Xiao-Ming; Fei, Guilin PLoS Genetics, Vol. 9, Issue 2 https://doi.org/10.1371/journal.pgen.1003281	journal	February 2013
Considering Transposable Element Diversification in De Novo Annotation Approaches Flutre, Timothée; Duprat, Elodie; Feuillet, Catherine PLoS ONE, Vol. 6, Issue 1 https://doi.org/10.1371/journal.pone.0016526	journal	January 2011
A large-scale whole-genome sequencing analysis reveals highly specific genome editing by both Cas9 and Cpf1 (Cas12a) nucleases in rice Tang, Xu; Liu, Guanqing; Zhou, Jianping figshare https://doi.org/10.6084/m9.figshare.c.4154243.v1	collection	January 2018

Linked Research (24)

Similar Records

The Sequences of 1504 Mutants in the Model Rice Variety Kitaake Facilitate Rapid Functional Genomic Studies

Journal Article · 2017 · Plant Cell · OSTI ID:1573127

Li, Guotian; Jain, Rashmi; Chern, Mawsheng; +14 more

A scaffolded and annotated reference genome of giant kelp (Macrocystis pyrifera)

Journal Article · 2023 · BMC Genomics · OSTI ID:1999966

Diesel, Jose; Molano, Gary; Montecinos, Gabriel J.; +10 more

Exploring the Switchgrass Transcriptome Using Second-Generation Sequencing Technology

Journal Article · 2012 · PLoS ONE · OSTI ID:1627508

Wang, Yixing; Zeng, Xin; Iyer, Niranjani J.; +3 more

Related Subjects

59 BASIC BIOLOGICAL SCIENCES
Rice
Kitaake
KitaakeX
XA21 immune receptor
Whole genome sequence
De novo genome assembly
Nipponbare
Zhenshan97

MOESM10 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293511 The current record is supplemented by this dataset	dataset	January 2019
MOESM10 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293511.v1 The current record is supplemented by this dataset	dataset	January 2019
MOESM11 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293520 The current record is supplemented by this dataset	dataset	January 2019
MOESM11 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293520.v1 The current record is supplemented by this dataset	dataset	January 2019
MOESM1 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293526 The current record is supplemented by this text	text	January 2019
MOESM1 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293526.v1 The current record is supplemented by this text	text	January 2019
MOESM2 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293535 The current record is supplemented by this text	text	January 2019
MOESM2 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293535.v1 The current record is supplemented by this text	text	January 2019
MOESM3 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293541 The current record is supplemented by this dataset	dataset	January 2019
MOESM3 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293541.v1 The current record is supplemented by this dataset	dataset	November 2019
MOESM4 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293547 The current record is supplemented by this dataset	dataset	January 2019
MOESM4 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293547.v1 The current record is supplemented by this dataset	dataset	January 2019
MOESM5 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293553 The current record is supplemented by this dataset	dataset	November 2019
MOESM5 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293553.v1 The current record is supplemented by this dataset	dataset	November 2019
MOESM6 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293562 The current record is supplemented by this dataset	dataset	January 2019
MOESM6 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293562.v1 The current record is supplemented by this dataset	dataset	January 2019
MOESM7 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293565 The current record is supplemented by this		November 2019
MOESM7 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293565.v1 The current record is supplemented by this text	text	January 2019
MOESM8 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293568 The current record is supplemented by this dataset	dataset	January 2019
MOESM8 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293568.v1 The current record is supplemented by this dataset	dataset	January 2019
MOESM9 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293577 The current record is supplemented by this text	text	January 2019
MOESM9 of Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.11293577.v1 The current record is supplemented by this text	text	January 2019
Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.c.4762613 The current record is supplemented by this collection	collection	January 2019
Genome sequence of the model rice variety KitaakeX Jain, Rashmi; Jenkins, Jerry; Shu, Shengqiang https://doi.org/10.6084/m9.figshare.c.4762613.v1 The current record is supplemented by this collection	collection	January 2019

Title: Genome sequence of the model rice variety KitaakeX

Citation Formats

References (69)

Linked Research (24)

Similar Records

Related Subjects