Permanent Draft Genome Sequence of Desulfurococcus amylolyticus Strain Z-533 T , a Peptide and Starch Degrader Isolated from Thermal Springs in the Kamchatka Peninsula and Kunashir Island, Russia
Abstract
Desulfurococcus amylolyticusZ-533T, a hyperthermophilic crenarcheon, ferments peptide and starch, generating acetate, isobutyrate, isovalerate, CO2, and hydrogen. UnlikeD. amylolyticusZ-1312, it cannot use cellulose and is inhibited by hydrogen. The reported draft genome sequence ofD. amylolyticusZ-533Twill help to understand the molecular basis for these differences.
- Authors:
-
- Department of Biochemistry, Virginia Tech, Blacksburg, Virginia, USA
- Centre for Algorithmic Biotechnology, ITBM, St. Petersburg State University, St. Petersburg, Russia
- U.S. Department of Energy Joint Genome Institute, Walnut Creek, California, USA
- Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA
- Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, Virginia, USA, Winogradsky Institute of Microbiology, Research Center of Biotechnology Russian Academy of Sciences, Moscow, Russia
- U.S. Department of Energy Joint Genome Institute, Walnut Creek, California, USA, Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA, Department of Biology, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
- Department of Biochemistry, Virginia Tech, Blacksburg, Virginia, USA, Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, Virginia, USA, Department of Biological Sciences, Virginia Tech, Blacksburg, Virginia, USA
- Publication Date:
- Research Org.:
- Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Biological and Environmental Research (BER)
- OSTI Identifier:
- 1608708
- Alternate Identifier(s):
- OSTI ID: 1393210
- Grant/Contract Number:
- AC02-05CH11231
- Resource Type:
- Published Article
- Journal Name:
- Genome Announcements
- Additional Journal Information:
- Journal Name: Genome Announcements Journal Volume: 5 Journal Issue: 15; Journal ID: ISSN 2169-8287
- Publisher:
- American Society for Microbiology
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES
Citation Formats
Susanti, Dwi, Johnson, Eric F., Lapidus, Alla, Han, James, Reddy, T. B. K., Mukherjee, Supratim, Pillay, Manoj, Perevalova, Anna A., Ivanova, Natalia N., Woyke, Tanja, Kyrpides, Nikos C., and Mukhopadhyay, Biswarup. Permanent Draft Genome Sequence of Desulfurococcus amylolyticus Strain Z-533 T , a Peptide and Starch Degrader Isolated from Thermal Springs in the Kamchatka Peninsula and Kunashir Island, Russia. United States: N. p., 2017.
Web. doi:10.1128/genomeA.00078-17.
Susanti, Dwi, Johnson, Eric F., Lapidus, Alla, Han, James, Reddy, T. B. K., Mukherjee, Supratim, Pillay, Manoj, Perevalova, Anna A., Ivanova, Natalia N., Woyke, Tanja, Kyrpides, Nikos C., & Mukhopadhyay, Biswarup. Permanent Draft Genome Sequence of Desulfurococcus amylolyticus Strain Z-533 T , a Peptide and Starch Degrader Isolated from Thermal Springs in the Kamchatka Peninsula and Kunashir Island, Russia. United States. https://doi.org/10.1128/genomeA.00078-17
Susanti, Dwi, Johnson, Eric F., Lapidus, Alla, Han, James, Reddy, T. B. K., Mukherjee, Supratim, Pillay, Manoj, Perevalova, Anna A., Ivanova, Natalia N., Woyke, Tanja, Kyrpides, Nikos C., and Mukhopadhyay, Biswarup. Thu .
"Permanent Draft Genome Sequence of Desulfurococcus amylolyticus Strain Z-533 T , a Peptide and Starch Degrader Isolated from Thermal Springs in the Kamchatka Peninsula and Kunashir Island, Russia". United States. https://doi.org/10.1128/genomeA.00078-17.
@article{osti_1608708,
title = {Permanent Draft Genome Sequence of Desulfurococcus amylolyticus Strain Z-533 T , a Peptide and Starch Degrader Isolated from Thermal Springs in the Kamchatka Peninsula and Kunashir Island, Russia},
author = {Susanti, Dwi and Johnson, Eric F. and Lapidus, Alla and Han, James and Reddy, T. B. K. and Mukherjee, Supratim and Pillay, Manoj and Perevalova, Anna A. and Ivanova, Natalia N. and Woyke, Tanja and Kyrpides, Nikos C. and Mukhopadhyay, Biswarup},
abstractNote = {Desulfurococcus amylolyticusZ-533T, a hyperthermophilic crenarcheon, ferments peptide and starch, generating acetate, isobutyrate, isovalerate, CO2, and hydrogen. UnlikeD. amylolyticusZ-1312, it cannot use cellulose and is inhibited by hydrogen. The reported draft genome sequence ofD. amylolyticusZ-533Twill help to understand the molecular basis for these differences.},
doi = {10.1128/genomeA.00078-17},
journal = {Genome Announcements},
number = 15,
volume = 5,
place = {United States},
year = {Thu Apr 13 00:00:00 EDT 2017},
month = {Thu Apr 13 00:00:00 EDT 2017}
}
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https://doi.org/10.1128/genomeA.00078-17
https://doi.org/10.1128/genomeA.00078-17
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