Permanent Draft Genome Sequence of Desulfurococcus amylolyticus Strain Z-533 ^T , a Peptide and Starch Degrader Isolated from Thermal Springs in the Kamchatka Peninsula and Kunashir Island, Russia

Journal Article · 12 April 2017 · Genome Announcements

DOI: https://doi.org/10.1128/genomeA.00078-17 · OSTI ID:1608708

Susanti, Dwi ^[1]; Johnson, Eric F. ^[1]; Lapidus, Alla ^[2]; Han, James ^[3]; Reddy, T. B. K. ^[3]; Mukherjee, Supratim ^[3]; Pillay, Manoj ^[4]; Perevalova, Anna A. ^[5]; Ivanova, Natalia N. ^[3]; Woyke, Tanja ^[3]; Kyrpides, Nikos C. ^[6]; Mukhopadhyay, Biswarup ^[7]

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1. Department of Biochemistry, Virginia Tech, Blacksburg, Virginia, USA
2. Centre for Algorithmic Biotechnology, ITBM, St. Petersburg State University, St. Petersburg, Russia
3. U.S. Department of Energy Joint Genome Institute, Walnut Creek, California, USA
4. Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA
5. Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, Virginia, USA, Winogradsky Institute of Microbiology, Research Center of Biotechnology Russian Academy of Sciences, Moscow, Russia
6. U.S. Department of Energy Joint Genome Institute, Walnut Creek, California, USA, Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA, Department of Biology, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
7. Department of Biochemistry, Virginia Tech, Blacksburg, Virginia, USA, Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, Virginia, USA, Department of Biological Sciences, Virginia Tech, Blacksburg, Virginia, USA

ABSTRACT Desulfurococcus amylolyticus Z-533 ^T , a hyperthermophilic crenarcheon, ferments peptide and starch, generating acetate, isobutyrate, isovalerate, CO ₂ , and hydrogen. Unlike D. amylolyticus Z-1312, it cannot use cellulose and is inhibited by hydrogen. The reported draft genome sequence of D. amylolyticus Z-533 ^T will help to understand the molecular basis for these differences.

• Research Organization: Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
• Sponsoring Organization: USDOE; USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23)
• Grant/Contract Number: AC02-05CH11231
• OSTI ID: 1608708
• Journal Information: Genome Announcements, Journal Name: Genome Announcements Journal Issue: 15 Vol. 5; ISSN 2169-8287
• Publisher: American Society for MicrobiologyCopyright Statement
• Country of Publication: United States
• Language: English