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January 2012 |
VICTOR: genome-based phylogeny and classification of prokaryotic viruses
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July 2017 |
Visual Analysis of Dynamic Networks Using Change Centrality
- Federico, P.; Pfeffer, J.; Aigner, W.
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2012 International Conference on Advances in Social Networks Analysis and Mining (ASONAM 2012), 2012 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining
https://doi.org/10.1109/ASONAM.2012.39
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conference
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August 2012 |
Host-linked soil viral ecology along a permafrost thaw gradient
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July 2018 |
Virus-mediated archaeal hecatomb in the deep seafloor
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October 2016 |
Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer
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November 2016 |
Reticulate Representation of Evolutionary and Functional Relationships between Phage Genomes
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February 2008 |
Virus taxonomy in the age of metagenomics
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January 2017 |
Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee
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January 2018 |
The Phage Proteomic Tree: a Genome-Based Taxonomy for Phage
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August 2002 |
NCBI Viral Genomes Resource
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November 2014 |
Evaluation of the genomic diversity of viruses infecting bacteria, archaea and eukaryotes using a common bioinformatic platform: steps towards a unified taxonomy
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September 2018 |
Patterns and ecological drivers of ocean viral communities
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May 2015 |
Real Time Classification of Viruses in 12 Dimensions
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May 2013 |
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
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September 1997 |
Microbial mediation of biogeochemical cycles revealed by simulation of global changes with soil transplant and cropping
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April 2014 |
The ‘Neglected’ Soil Virome – Potential Role and Impact
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August 2018 |
Marine viruses — major players in the global ecosystem
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October 2007 |
Bacteriophage evolution differs by host, lifestyle and genome
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July 2017 |
Classification of Myoviridae bacteriophages using protein sequence similarity
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January 2009 |
Assessing experimentally derived interactions in a small world
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April 2003 |
Putative archaeal viruses from the mesopelagic ocean
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January 2017 |
Viral tagging reveals discrete populations in Synechococcus viral genome sequence space
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July 2014 |
Challenges in RNA virus bioinformatics
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March 2014 |
Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences
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August 2014 |
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
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September 2016 |
Single-virus genomics reveals hidden cosmopolitan and abundant viruses
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June 2017 |
Whole-genome prokaryotic phylogeny
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May 2004 |
Viral metabolic reprogramming in marine ecosystems
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June 2016 |
Minimum Information about an Uncultivated Virus Genome (MIUViG)
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December 2018 |
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
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August 2018 |
Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
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April 2015 |
Fast and sensitive protein alignment using DIAMOND
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November 2014 |
The genomic underpinnings of eukaryotic virus taxonomy: creating a sequence-based framework for family-level virus classification
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February 2018 |
Phage or foe: an insight into the impact of viral predation on microbial communities
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January 2018 |
Going viral: next-generation sequencing applied to phage populations in the human gut
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August 2012 |
Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2017)
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April 2017 |
The Double-Stranded DNA Virosphere as a Modular Hierarchical Network of Gene Sharing
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August 2016 |
Structure and function of the global ocean microbiome
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May 2015 |
IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes
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November 2018 |
Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation
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November 2015 |
Comparing the performance of biomedical clustering methods
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September 2015 |
Unification of the Globally Distributed Spindle-Shaped Viruses of the Archaea
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December 2013 |
Ecogenomics of virophages and their giant virus hosts assessed through time series metagenomics
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October 2017 |
The global ocean microbiome
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December 2015 |
Unifying classical and molecular taxonomic classification: analysis of the Podoviridae using BLASTP-based tools
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June 2008 |
iVirus: facilitating new insights in viral ecology with software and community data sets imbedded in a cyberinfrastructure
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July 2016 |
Deciphering the Human Virome with Single-Virus Genomics and Metagenomics
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March 2018 |
Evaluation of clustering algorithms for protein-protein interaction networks
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November 2006 |
ViPTree: the viral proteomic tree server
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March 2017 |
Molecular Bases and Role of Viruses in the Human Microbiome
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November 2014 |
Detecting overlapping protein complexes in protein-protein interaction networks
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March 2012 |
Horizontal Gene Transfer and the Evolution of Microvirid Coliphage Genomes
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January 2006 |
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
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October 2010 |
vConTACT: an iVirus tool to classify double-stranded DNA viruses that infect Archaea and Bacteria
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January 2017 |
Taxonomy of prokaryotic viruses: update from the ICTV bacterial and archaeal viruses subcommittee
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January 2016 |
Python for Scientific Computing
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January 2007 |
Bacteria-Phage Antagonistic Coevolution in Soil
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March 2011 |
A structured annotation frame for the transposable phages: A new proposed family “Saltoviridae” within the Caudovirales
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March 2015 |
IntScore: a web tool for confidence scoring of biological interactions
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May 2012 |
The human microbiome: at the interface of health and disease
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March 2012 |
The Microbial Engines That Drive Earth's Biogeochemical Cycles
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May 2008 |
Biological species in the viral world
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May 2018 |
Viromes, Not Gene Markers, for Studying Double-Stranded DNA Virus Communities
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December 2014 |
Uncovering Earth’s virome
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August 2016 |
Bacteriophages of Gordonia spp. Display a Spectrum of Diversity and Genetic Relationships
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August 2017 |
The genome and structural proteome of an ocean siphovirus: a new window into the cyanobacterial ‘mobilome’
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November 2009 |
Lysogeny in nature: mechanisms, impact and ecology of temperate phages
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March 2017 |
Ménage à trois in the human gut: interactions between host, bacteria and phages
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May 2017 |
NWChem: A comprehensive and scalable open-source solution for large scale molecular simulations
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September 2010 |
Molecular Bases and Role of Viruses in the Human Microbiome
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November 2014 |
A structured annotation frame for the transposable phages: A new proposed family “Saltoviridae” within the Caudovirales
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March 2015 |
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
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journal
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September 2016 |
Going viral: next-generation sequencing applied to phage populations in the human gut
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August 2012 |
Virus-mediated archaeal hecatomb in the deep seafloor
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October 2016 |
Imbroglios of Viral Taxonomy: Genetic Exchange and Failings of Phenetic Approaches
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September 2002 |
The genomic underpinnings of eukaryotic virus taxonomy: creating a sequence-based framework for family-level virus classification
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collection
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January 2018 |