Structure and Orientation of Molecular Wires Embedded in Ultrathin Silica Membrane for Artificial Photosynthesis Elucidated by Polarized FT-IRRAS
Abstract
Surface sensitive infrared spectroscopic methods are employed for elucidating the structure and orientation of charge conducting molecular wires of type oligo(p-phenylenevinylene) covalently anchored on an ultrathin planar Co oxide catalyst surface and embedded in a few nanometer thick amorphous silica membrane. Comparison of polarized FT-IRRAS with nonpolarized grazing angle ATR FT-IR spectra of nanolayer samples supported on a flat Pt surface and transmission spectra of powder samples showed distinct intensity differences for molecular in-plane and out-of-plane modes that reveal the spatial orientation with respect to the oxide surface. All observations support an upright orientation of the molecular wire axis, which is further confirmed by comparison with IRRAS measurements of physisorbed, horizontally positioned wire molecules. The structural integrity of the molecules is maintained after embedding in the silica membrane by plasma-enhanced atomic layer deposition at 40 °C. The results provide the first spectroscopic evidence of perpendicular orientation of the wire molecules. The complementary surface sensitive infrared measurements by FT-IRRAS and grazing angle ATR FT-IR constitute a powerful approach for elucidating the structure and orientation of surface-anchored molecules and the integrity upon casting into oxide layers such as silica for developing artificial photosystems. Use of the nanolayer construct in IRRAS spectroelectrochemical cellmore »
- Authors:
-
- Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Molecular Biophysics and Integrated Bioimaging Division; Univ. of California, Berkeley, CA (United States)
- Publication Date:
- Research Org.:
- Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Basic Energy Sciences (BES). Chemical Sciences, Geosciences, and Biosciences Division
- OSTI Identifier:
- 1560608
- Grant/Contract Number:
- AC02-05CH11231
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Journal of Physical Chemistry. C
- Additional Journal Information:
- Journal Volume: 123; Journal Issue: 31; Journal ID: ISSN 1932-7447
- Publisher:
- American Chemical Society
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY
Citation Formats
Katsoukis, Georgios, Jo, Won Jun, and Frei, Heinz. Structure and Orientation of Molecular Wires Embedded in Ultrathin Silica Membrane for Artificial Photosynthesis Elucidated by Polarized FT-IRRAS. United States: N. p., 2019.
Web. doi:10.1021/acs.jpcc.9b02523.
Katsoukis, Georgios, Jo, Won Jun, & Frei, Heinz. Structure and Orientation of Molecular Wires Embedded in Ultrathin Silica Membrane for Artificial Photosynthesis Elucidated by Polarized FT-IRRAS. United States. https://doi.org/10.1021/acs.jpcc.9b02523
Katsoukis, Georgios, Jo, Won Jun, and Frei, Heinz. Thu .
"Structure and Orientation of Molecular Wires Embedded in Ultrathin Silica Membrane for Artificial Photosynthesis Elucidated by Polarized FT-IRRAS". United States. https://doi.org/10.1021/acs.jpcc.9b02523. https://www.osti.gov/servlets/purl/1560608.
@article{osti_1560608,
title = {Structure and Orientation of Molecular Wires Embedded in Ultrathin Silica Membrane for Artificial Photosynthesis Elucidated by Polarized FT-IRRAS},
author = {Katsoukis, Georgios and Jo, Won Jun and Frei, Heinz},
abstractNote = {Surface sensitive infrared spectroscopic methods are employed for elucidating the structure and orientation of charge conducting molecular wires of type oligo(p-phenylenevinylene) covalently anchored on an ultrathin planar Co oxide catalyst surface and embedded in a few nanometer thick amorphous silica membrane. Comparison of polarized FT-IRRAS with nonpolarized grazing angle ATR FT-IR spectra of nanolayer samples supported on a flat Pt surface and transmission spectra of powder samples showed distinct intensity differences for molecular in-plane and out-of-plane modes that reveal the spatial orientation with respect to the oxide surface. All observations support an upright orientation of the molecular wire axis, which is further confirmed by comparison with IRRAS measurements of physisorbed, horizontally positioned wire molecules. The structural integrity of the molecules is maintained after embedding in the silica membrane by plasma-enhanced atomic layer deposition at 40 °C. The results provide the first spectroscopic evidence of perpendicular orientation of the wire molecules. The complementary surface sensitive infrared measurements by FT-IRRAS and grazing angle ATR FT-IR constitute a powerful approach for elucidating the structure and orientation of surface-anchored molecules and the integrity upon casting into oxide layers such as silica for developing artificial photosystems. Use of the nanolayer construct in IRRAS spectroelectrochemical cell configuration will enable in situ monitoring of the structural and orientation integrity of the silica embedded molecular wires under the sustained electron and proton flux conditions of photocatalytic operation.},
doi = {10.1021/acs.jpcc.9b02523},
journal = {Journal of Physical Chemistry. C},
number = 31,
volume = 123,
place = {United States},
year = {Thu Jul 18 00:00:00 EDT 2019},
month = {Thu Jul 18 00:00:00 EDT 2019}
}
Web of Science
Figures / Tables:
Works referenced in this record:
Fabrication of Core–Shell Nanotube Array for Artificial Photosynthesis Featuring an Ultrathin Composite Separation Membrane
journal, January 2018
- Edri, Eran; Aloni, Shaul; Frei, Heinz
- ACS Nano, Vol. 12, Issue 1
Visible Light-Induced Hole Injection into Rectifying Molecular Wires Anchored on Co 3 O 4 and SiO 2 Nanoparticles
journal, October 2012
- Soo, Han Sen; Agiral, Anil; Bachmeier, Andreas
- Journal of the American Chemical Society, Vol. 134, Issue 41
Visible Light Induced Hole Transport from Sensitizer to Co 3 O 4 Water Oxidation Catalyst across Nanoscale Silica Barrier with Embedded Molecular Wires
journal, May 2013
- Agiral, Anil; Soo, Han Sen; Frei, Heinz
- Chemistry of Materials, Vol. 25, Issue 11
Charge Transport through Organic Molecular Wires Embedded in Ultrathin Insulating Inorganic Layer
journal, December 2015
- Edri, Eran; Frei, Heinz
- The Journal of Physical Chemistry C, Vol. 119, Issue 51
Heterobinuclear Light Absorber Coupled to Molecular Wire for Charge Transport across Ultrathin Silica Membrane for Artificial Photosynthesis
journal, August 2018
- Katsoukis, Georgios; Frei, Heinz
- ACS Applied Materials & Interfaces, Vol. 10, Issue 37
Ultrathin oxide layers for nanoscale integration of molecular light absorbers, catalysts, and complete artificial photosystems
journal, January 2019
- Katsoukis, Georgios; Frei, Heinz
- The Journal of Chemical Physics, Vol. 150, Issue 4
Ultrafast Charge Transfer between Light Absorber and Co 3 O 4 Water Oxidation Catalyst across Molecular Wires Embedded in Silica Membrane
journal, April 2017
- Edri, Eran; Cooper, Jason K.; Sharp, Ian D.
- Journal of the American Chemical Society, Vol. 139, Issue 15
Inorganic core–shell assemblies for closing the artificial photosynthetic cycle
journal, January 2014
- Yuan, Guangbi; Agiral, Anil; Pellet, Norman
- Faraday Discuss., Vol. 176
Nanoscale membranes that chemically isolate and electronically wire up the abiotic/biotic interface
journal, June 2018
- Cornejo, Jose A.; Sheng, Hua; Edri, Eran
- Nature Communications, Vol. 9, Issue 1
The vibrational assignments and configuration of aniline, aniline-NHD and aniline-ND2
journal, January 1960
- Evans, J. C.
- Spectrochimica Acta, Vol. 16, Issue 4
Surface infrared spectroscopy
journal, May 1988
- Chabal, Y. J.
- Surface Science Reports, Vol. 8, Issue 5-7
Determination of surface coverage for tetraphenylporphyrin monolayers using ultraviolet visible absorption and x-ray photoelectron spectroscopies
journal, January 2002
- Bramblett, Ariana L.; S. Boeckl, Maximiliane; Hauch, Kip D.
- Surface and Interface Analysis, Vol. 33, Issue 6
Effect of ion interactions on the IR spectrum of benzenesulfonate ion. Restoration of sulfonate ion symmetry in sodium benzenesulfonate dimer
journal, November 2016
- Shishlov, N. M.; Khursan, S. L.
- Journal of Molecular Structure, Vol. 1123
Visible light absorption of binuclear TiOCoII charge-transfer unit assembled in mesoporous silica
journal, June 2007
- Han, Hongxian; Frei, Heinz
- Microporous and Mesoporous Materials, Vol. 103, Issue 1-3
Optical spectra and structure of oligomeric models of polyparaphenylenevinylene
journal, September 1991
- Tian, B.; Zerbi, G.; Schenk, R.
- The Journal of Chemical Physics, Vol. 95, Issue 5
Vibrational spectra and DFT calculations of PPV-oligomers
journal, December 2003
- Hrenar, T.; Mitrić, R.; Meić, Z.
- Journal of Molecular Structure, Vol. 661-662
Spontaneously organized molecular assemblies. 2. Quantitative infrared spectroscopic determination of equilibrium structures of solution-adsorbed n-alkanoic acids on an oxidized aluminum surface
journal, January 1985
- Allara, David L.; Nuzzo, Ralgh G.
- Langmuir, Vol. 1, Issue 1
SiO 2 Atomic Layer Deposition Using Tris(dimethylamino)silane and Hydrogen Peroxide Studied by in Situ Transmission FTIR Spectroscopy
journal, April 2009
- Burton, B. B.; Kang, S. W.; Rhee, S. W.
- The Journal of Physical Chemistry C, Vol. 113, Issue 19
Structural investigation of silica gel films by infrared spectroscopy
journal, October 1990
- Almeida, Rui M.; Pantano, Carlo G.
- Journal of Applied Physics, Vol. 68, Issue 8
Atomic Layer Deposition of Silicon Dioxide Using Aminosilanes Di- sec -butylaminosilane and Bis( tert -butylamino)silane with Ozone
journal, May 2016
- Peña, Luis Fabián; Nanayakkara, Charith E.; Mallikarjunan, Anupama
- The Journal of Physical Chemistry C, Vol. 120, Issue 20
Infrared Characterization of Interfacial Si−O Bond Formation on Silanized Flat SiO 2 /Si Surfaces
journal, April 2010
- Tian, Ruhai; Seitz, Oliver; Li, Meng
- Langmuir, Vol. 26, Issue 7
Glass-Encapsulated Light Harvesters: More Efficient Dye-Sensitized Solar Cells by Deposition of Self-Aligned, Conformal, and Self-Limited Silica Layers
journal, May 2012
- Son, Ho-Jin; Wang, Xinwei; Prasittichai, Chaiya
- Journal of the American Chemical Society, Vol. 134, Issue 23
Works referencing / citing this record:
Ultrathin Amorphous Silica Membrane Enhances Proton Transfer across Solid‐to‐Solid Interfaces of Stacked Metal Oxide Nanolayers while Blocking Oxygen
journal, February 2020
- Jo, Won Jun; Katsoukis, Georgios; Frei, Heinz
- Advanced Functional Materials, Vol. 30, Issue 12
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