DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Pore-Scale Monitoring of the Effect of Microarchitecture on Fungal Growth in a Two-Dimensional Soil-Like Micromodel

Journal Article · · Frontiers in Environmental Science

Not Available

Research Organization:
Univ. of Connecticut, Storrs, CT (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23)
Grant/Contract Number:
SC0014522
OSTI ID:
1458775
Report Number(s):
DOE-UCONN--14522-2; 68
Journal Information:
Frontiers in Environmental Science, Journal Name: Frontiers in Environmental Science Vol. 6; ISSN 2296-665X
Publisher:
Frontiers Research FoundationCopyright Statement
Country of Publication:
Switzerland
Language:
English

References (45)

Pore-scale water dynamics during drying and the impacts of structure and surface wettability: PORE-SCALE WATER DYNAMICS DURING DRYING journal July 2017
Fungi Use Efficient Algorithms for the Exploration of Microfluidic Networks journal August 2006
What Determines Growth Direction in Fungal Hyphae? journal June 1998
Mycorrhizal Fungi Influence Soil Structure book January 2000
Microenvironments of soil microorganisms journal May 1988
Effects of volatile organic compounds on the growth and development of fungi journal February 1973
A packing algorithm for particles of arbitrary shapes journal October 2001
Saprotrophic cord-forming fungi: warfare strategies and other ecological aspects journal June 1993
Soil fungal dynamics: Parameterisation and sensitivity analysis of modelled physiological processes, soil architecture and carbon distribution journal January 2013
Modelling hyphal networks journal April 2012
Key differences between lateral and apical branching in hyphae of Neurospora crassa journal September 2004
Automated image-based analysis of spatio-temporal fungal dynamics journal November 2015
Probing the growth dynamics of Neurospora crassa with microfluidic structures journal June 2011
Linking hyphal growth to colony dynamics: Spatially explicit models of mycelia journal November 2008
Mycelial response to spatiotemporal nutrient heterogeneity: A velocity-jump mathematical model journal April 2012
Modelling three-dimensional fungal growth in response to environmental stimuli journal February 2017
A mathematical model of nutrient influence on fungal competition journal February 2018
Microfluidics structures for probing the dynamic behaviour of filamentous fungi journal May 2010
Three dimensional quantification of biological samples using micro-computer aided tomography (microCT) journal January 2013
Preferential spread of the pathogenic fungus Rhizoctonia solani through structured soil journal February 2004
Combining X-ray CT and 3D printing technology to produce microcosms with replicable, complex pore geometries journal August 2012
Synergistic effects of soil microstructure and bacterial EPS on drying rate in emulated soil micromodels journal April 2015
Continuity of air-filled pores and invasion thresholds for a soil-borne fungal plant pathogen, Rhizoctonia solani journal November 1999
The magnitude of fungal diversity: the 1.5 million species estimate revisited journal December 2001
In situ visualisation of fungi in soil thin sections: problems with crystallisation of the fluorochrome FB 28 (Calcofluor M2R) and improved staining by SCRI Renaissance 2200 journal March 2002
Protist-Facilitated Particle Transport Using Emulated Soil Micromodels journal January 2015
Surface Engineering of Poly(dimethylsiloxane) Microfluidic Devices Using Transition Metal Sol−Gel Chemistry journal April 2006
Emerging fungal threats to animal, plant and ecosystem health journal April 2012
Soil-on-a-Chip: microfluidic platforms for environmental organismal studies journal January 2016
Soil physics, fungal epidemiology and the spread of Rhizoctonia solani journal August 2001
Effect of physical conditions on the spatial and temporal dynamics of the soil-borne fungal pathogen Rhizoctonia solani journal April 1998
Environmental Impact and Mechanisms of the Biological Clogging of Saturated Soils and Aquifer Materials journal April 1998
A New Method for the Quantification of Rhizoctonia solani and R. oryzae from Soil journal July 2005
Emergent Behavior of Soil Fungal Dynamics: Influence of Soil Architecture and Water Distribution journal January 2012
Thigmotropism and stretch-activated channels in the pathogenic fungus Candida albicans journal March 1998
Empirical evidence of spatial thresholds to control invasion of fungal parasites and saprotrophs journal July 2004
Effect of bulk density on the spatial organisation of the fungus Rhizoctonia solani in soil journal May 2003
High-resolution synchrotron imaging shows that root hairs influence rhizosphere soil structure formation journal July 2017
The Mycelium as a Network journal June 2017
Microscale Heterogeneity Explains Experimental Variability and Non-Linearity in Soil Organic Matter Mineralisation journal May 2015
A Review of Micromodels and Their Use in Two-Phase Flow Studies journal January 2012
Green Water and Global Food Security journal January 2013
Grand challenges in the research on soil processes journal February 2015
Spatial Organization Plasticity as an Adaptive Driver of Surface Microbial Communities journal July 2017
Modelling and quantifying the effect of heterogeneity in soil physical conditions on fungal growth journal January 2010