Genome sequence of Frateuria aurantia type strain (Kondô 67T), a xanthomonade isolated from Lilium auratium Lindl.

Anderson, Iain; Teshima, Huzuki; Nolan, Matt; Lapidus, Alla; Tice, Hope; Del Rio, Tijana Glavina; Cheng, Jan-Fang; Han, Cliff; Tapia, Roxanne; Goodwin, Lynne A.; Pitluck, Sam; Liolios, Konstantinos; Mavromatis, Konstantinos; Pagani, Ioanna; Ivanova, Natalia; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Rohde, Manfred; Lang, Elke; Detter, John C.; Göker, Markus; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans-Peter

doi:10.4056/sigs.4338002

Title: Genome sequence of Frateuria aurantia type strain (Kondô 67T), a xanthomonade isolated from Lilium auratium Lindl.

Journal Article · Wed Oct 16 00:00:00 UTC 2013 · Standards in Genomic Sciences

DOI: https://doi.org/10.4056/sigs.4338002 · OSTI ID:1407204

Anderson, Iain ^[1]; Teshima, Huzuki ^[2]; Nolan, Matt ^[1]; Lapidus, Alla ^[3]; Tice, Hope ^[1]; Del Rio, Tijana Glavina ^[1]; Cheng, Jan-Fang ^[1]; Han, Cliff ^[2]; Tapia, Roxanne ^[2]; Goodwin, Lynne A. ^[2]; Pitluck, Sam ^[1]; Liolios, Konstantinos ^[1]; Mavromatis, Konstantinos ^[1]; Pagani, Ioanna ^[1]; Ivanova, Natalia ^[1]; Mikhailova, Natalia ^[1]; Pati, Amrita ^[1]; Chen, Amy ^[4]; Palaniappan, Krishna ^[4]; Land, Miriam ^[5] more »

USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
St. Petersburg State Univ. (Russian Federation); St. Petersburg Academic Univ. (Russian Federation)
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
Helmholtz Centre for Infection Research, Braunschweig (Germany)
Leibniz Inst. DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig (Germany)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Univ. of California Davis Genome Center, CA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Univ. of Queensland, Brisbane, QLD (Australia)

Frateuria aurantia (ex Kondô and Ameyama 1958) Swings et al. 1980 is a member of the bispecific genus Frateuria in the family Xanthomonadaceae, which is already heavily targeted for non-type strain genome sequencing. Strain Kondô 67^T was initially (1958) identified as a member of ‘Acetobacter aurantius’, a name that was not considered for the approved list. Kondô 67^T was therefore later designated as the type strain of the newly proposed acetogenic species Frateuria aurantia. The strain is of interest because of its triterpenoids (hopane family). F. aurantia Kondô 67^T is the first member of the genus Frateura whose genome sequence has been deciphered, and here we describe the features of this organism, together with the complete genome sequence and annotation. The 3,603,458-bp long chromosome with its 3,200 protein-coding and 88 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

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Research Organization:: Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)

Sponsoring Organization:: German Research Foundation (DFG); Russian Ministry of Science; USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23)

Grant/Contract Number:: AC02-05CH11231; AC05-00OR22725; AC52-07NA27344

OSTI ID:: 1407204

Journal Information:: Standards in Genomic Sciences, Journal Name: Standards in Genomic Sciences Vol. 9; ISSN 1944-3277

Publisher:: BioMed CentralCopyright Statement

Country of Publication:: United States

Language:: English

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Exemplar Abstract for Frateuria aurantia Swings et al. 1980. Parker, Charles Thomas; Taylor, Dorothea; Garrity, George M. NamesforLife https://doi.org/10.1601/ex.2235	dataset	January 2013
Exemplar Abstract for Frateuria aurantia Swings et al. 1980. Parker, Charles Thomas; Taylor, Dorothea; Garrity, George M. NamesforLife https://doi.org/10.1601/ex.2235	dataset	January 2013

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Title: Genome sequence of Frateuria aurantia type strain (Kondô 67T), a xanthomonade isolated from Lilium auratium Lindl.

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