Streptococcus pyogenes quinolinate-salvage pathway-structural and functional studies of quinolinate phosphoribosyl transferase and NH3-dependent NAD+ synthetase

Booth, William T.; Morris, Trevor L.; Mysona, David P.; Shah, Milan J.; Taylor, Linda K.; Karlin, Taylor W.; Clary, Kathryn; Majorek, Karolina A.; Offermann, Lesa R.; Chruszcz, Maksymilian

doi:10.1111/febs.14136

Title: Streptococcus pyogenes quinolinate-salvage pathway-structural and functional studies of quinolinate phosphoribosyl transferase and NH₃-dependent NAD⁺ synthetase

Authors:

Booth, William T. ^[1]; Morris, Trevor L. ^[1]; Mysona, David P. ^[1]; Shah, Milan J. ^[1]; Taylor, Linda K. ^[1]; Karlin, Taylor W. ^[1]; Clary, Kathryn ^[1]; Majorek, Karolina A. ^[2]; Offermann, Lesa R. ^[3]; Chruszcz, Maksymilian ^[1]

Department of Chemistry and Biochemistry, University of South Carolina, Columbia SC USA
Department of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville VA USA
Department of Chemistry and Biochemistry, University of South Carolina, Columbia SC USA, Department of Chemistry, Davidson College, NC USA

Publication Date:: Fri Jul 07 00:00:00 EDT 2017

Sponsoring Org.:: USDOE Office of Science (SC), Basic Energy Sciences (BES)

OSTI Identifier:: 1374080

Grant/Contract Number:: AC02-06CH11357

Resource Type:: Publisher's Accepted Manuscript

Journal Name:: Federation of European Biochemical Societies (FEBS) Journal

Additional Journal Information:: Journal Name: Federation of European Biochemical Societies (FEBS) Journal Journal Volume: 284 Journal Issue: 15; Journal ID: ISSN 1742-464X

Publisher:: Federation of European Biochemical Societies

Country of Publication:: United Kingdom

Language:: English

Citation Formats


                    Booth, William T., Morris, Trevor L., Mysona, David P., Shah, Milan J., Taylor, Linda K., Karlin, Taylor W., Clary, Kathryn, Majorek, Karolina A., Offermann, Lesa R., and Chruszcz, Maksymilian. Streptococcus pyogenes quinolinate-salvage pathway-structural and functional studies of quinolinate phosphoribosyl transferase and NH3-dependent NAD+ synthetase.  United Kingdom: N. p., 2017. 
Web.  doi:10.1111/febs.14136.

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                    Booth, William T., Morris, Trevor L., Mysona, David P., Shah, Milan J., Taylor, Linda K., Karlin, Taylor W., Clary, Kathryn, Majorek, Karolina A., Offermann, Lesa R., & Chruszcz, Maksymilian. Streptococcus pyogenes quinolinate-salvage pathway-structural and functional studies of quinolinate phosphoribosyl transferase and NH3-dependent NAD+ synthetase.  United Kingdom.  https://doi.org/10.1111/febs.14136

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                    Booth, William T., Morris, Trevor L., Mysona, David P., Shah, Milan J., Taylor, Linda K., Karlin, Taylor W., Clary, Kathryn, Majorek, Karolina A., Offermann, Lesa R., and Chruszcz, Maksymilian. Fri .  
"Streptococcus pyogenes quinolinate-salvage pathway-structural and functional studies of quinolinate phosphoribosyl transferase and NH3-dependent NAD+ synthetase".  United Kingdom.  https://doi.org/10.1111/febs.14136.

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@article{osti_1374080,

  title        = {Streptococcus pyogenes quinolinate-salvage pathway-structural and functional studies of quinolinate phosphoribosyl transferase and NH3-dependent NAD+ synthetase},

  author       = {Booth, William T. and Morris, Trevor L. and Mysona, David P. and Shah, Milan J. and Taylor, Linda K. and Karlin, Taylor W. and Clary, Kathryn and Majorek, Karolina A. and Offermann, Lesa R. and Chruszcz, Maksymilian},

  abstractNote = {},

  doi          = {10.1111/febs.14136},

  journal      = {Federation of European Biochemical Societies (FEBS) Journal},

  number       = 15,

  volume       = 284,

  place        = {United Kingdom},

  year         = {Fri Jul 07 00:00:00 EDT 2017},

  month        = {Fri Jul 07 00:00:00 EDT 2017}

}

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https://doi.org/10.1111/febs.14136

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Title: Streptococcus pyogenes quinolinate-salvage pathway-structural and functional studies of quinolinate phosphoribosyl transferase and NH3-dependent NAD+ synthetase

Citation Formats

CDD: NCBI's conserved domain database journal, November 2014

The TIM-barrel fold: a versatile framework for efficient enzymes journal, March 2001

Calcium-dependent bacteriophage DNA infection journal, October 1970

The Pfam protein families database: towards a more sustainable future journal, December 2015

eQuilibrator--the biochemical thermodynamics calculator journal, November 2011

HKL -3000: the integration of data reduction and structure solution – from diffraction images to an initial model in minutes journal, July 2006

Dali server: conservation mapping in 3D journal, May 2010

MolProbity : all-atom structure validation for macromolecular crystallography journal, December 2009

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DEG 10, an update of the database of essential genes that includes both protein-coding genes and noncoding genomic elements: Table 1. journal, November 2013

The outB Gene of Bacillus subtilis Codes for NAD Synthetase journal, March 1995

REFMAC 5 for the refinement of macromolecular crystal structures journal, March 2011

The Physiological Action of Picolinic Acid in the Human Brain journal, January 2009

Structural and functional comparison of hexahistidine tagged and untagged forms of small multidrug resistance protein, EmrE journal, May 2015

Double trouble-Buffer selection and His-tag presence may be responsible for nonreproducibility of biomedical experiments: His-Tag and HEPES Influence on GNAT Enzymes journal, July 2014

Structural and Kinetic Characterization of Quinolinate Phosphoribosyltransferase (hQPRTase) from Homo sapiens journal, October 2007

Human macrophages convert l-tryptophan into the neurotoxin quinolinic acid journal, May 1992

The Sequencing, Expression, Purification, and Steady-State Kinetic Analysis of Quinolinate Phosphoribosyl Transferase fromEscherichia coli journal, January 1996

Streptolysin S-like virulence factors: the continuing sagA journal, August 2011

Targeting NAD Biosynthesis in Bacterial Pathogens: Structure-Based Development of Inhibitors of Nicotinate Mononucleotide Adenylyltransferase NadD journal, August 2009

Quinolinate Salvage and Insights for Targeting NAD Biosynthesis in Group A Streptococci journal, November 2012

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Title: Streptococcus pyogenes quinolinate-salvage pathway-structural and functional studies of quinolinate phosphoribosyl transferase and NH₃-dependent NAD⁺ synthetase

CDD: NCBI's conserved domain database
journal, November 2014

The TIM-barrel fold: a versatile framework for efficient enzymes
journal, March 2001

Calcium-dependent bacteriophage DNA infection
journal, October 1970

The Pfam protein families database: towards a more sustainable future
journal, December 2015

eQuilibrator--the biochemical thermodynamics calculator
journal, November 2011

HKL -3000: the integration of data reduction and structure solution – from diffraction images to an initial model in minutes
journal, July 2006

Dali server: conservation mapping in 3D
journal, May 2010

MolProbity : all-atom structure validation for macromolecular crystallography
journal, December 2009

Coot model-building tools for molecular graphics
journal, November 2004

The α / β hydrolase fold
journal, January 1992

NH ₃ -dependent NAD ⁺ synthetase from Bacillus subtilis at 1 Å resolution
journal, June 2002

DEG 10, an update of the database of essential genes that includes both protein-coding genes and noncoding genomic elements: Table 1.
journal, November 2013

The outB Gene of Bacillus subtilis Codes for NAD Synthetase
journal, March 1995

REFMAC 5 for the refinement of macromolecular crystal structures
journal, March 2011

The Physiological Action of Picolinic Acid in the Human Brain
journal, January 2009

Structural and functional comparison of hexahistidine tagged and untagged forms of small multidrug resistance protein, EmrE
journal, May 2015

Double trouble-Buffer selection and His-tag presence may be responsible for nonreproducibility of biomedical experiments: His-Tag and HEPES Influence on GNAT Enzymes
journal, July 2014

Structural and Kinetic Characterization of Quinolinate Phosphoribosyltransferase (hQPRTase) from Homo sapiens
journal, October 2007

Human macrophages convert l-tryptophan into the neurotoxin quinolinic acid
journal, May 1992

The Sequencing, Expression, Purification, and Steady-State Kinetic Analysis of Quinolinate Phosphoribosyl Transferase fromEscherichia coli
journal, January 1996

Streptolysin S-like virulence factors: the continuing sagA
journal, August 2011

Targeting NAD Biosynthesis in Bacterial Pathogens: Structure-Based Development of Inhibitors of Nicotinate Mononucleotide Adenylyltransferase NadD
journal, August 2009

Quinolinate Salvage and Insights for Targeting NAD Biosynthesis in Group A Streptococci
journal, November 2012

Structures of Escherichia coli NAD Synthetase with Substrates and Products Reveal Mechanistic Rearrangements
journal, February 2005

Neopterin production and tryptophan degradation in humans infected by Streptococcus pyogenes
journal, April 2001

Stabilization of active-site loops in NH ₃ -dependent NAD ⁺ synthetase from Bacillus subtilis
journal, May 2001

Transformation In Escherichia coli: Studies On The Role Of The Heat Shock In Induction Of Competence
journal, March 1983

Molecular replacement with MOLREP
journal, December 2009

ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids
journal, May 2010

CLANS: a Java application for visualizing protein families based on pairwise similarity
journal, July 2004

Validation of metal-binding sites in macromolecular structures with the CheckMyMetal web server
journal, December 2013

Protein database searches using compositionally adjusted substitution matrices
journal, October 2005

Regulation of active site coupling in glutamine-dependent NAD+ synthetase
journal, March 2009

UniProt: a hub for protein information
journal, October 2014

Inference of Macromolecular Assemblies from Crystalline State
journal, September 2007

Structural adaptation of an interacting non-native C-terminal helical extension revealed in the crystal structure of NAD ⁺ synthetase from Bacillus anthracis
journal, July 2007

Saliva the defender of the oral cavity
journal, January 2002

Crystal structure of quinolinic acid phosphoribosyltransferase from Mycobacterium tuberculosis: a potential TB drug target
journal, December 1998