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Title: Do dynamic global vegetation models capture the seasonality of carbon fluxes in the Amazon basin? A data-model intercomparison

Abstract

To predict forest response to long-term climate change with high confidence requires that dynamic global vegetation models (DGVMs) be successfully tested against ecosystem response to short-term variations in environmental drivers, including regular seasonal patterns. Here, we used an integrated dataset from four forests in the Brasil flux network, spanning a range of dry-season intensities and lengths, to determine how well four state-of-the-art models (IBIS, ED2, JULES, and CLM3.5) simulated the seasonality of carbon exchanges in Amazonian tropical forests. We found that most DGVMs poorly represented the annual cycle of gross primary productivity (GPP), of photosynthetic capacity (Pc), and of other fluxes and pools. Models simulated consistent dry-season declines in GPP in the equatorial Amazon (Manaus K34, Santarem K67, and Caxiuanã CAX); a contrast to observed GPP increases. Model simulated dry-season GPP reductions were driven by an external environmental factor, ‘soil water stress’ and consequently by a constant or decreasing photosynthetic infrastructure (Pc), while observed dry-season GPP resulted from a combination of internal biological (leaf-flush and abscission and increased Pc) and environmental (incoming radiation) causes. Moreover, we found models generally overestimated observed seasonal net ecosystem exchange (NEE) and respiration (Re) at equatorial locations. In contrast, a southern Amazon forest (Jarú RJA)more » exhibited dry-season declines in GPP and Re consistent with most DGVMs simulations. While water limitation was represented in models and the primary driver of seasonal photosynthesis in southern Amazonia, changes in internal biophysical processes, light-harvesting adaptations (e.g., variations in leaf area index (LAI) and increasing leaf-level assimilation rate related to leaf demography), and allocation lags between leaf and wood, dominated equatorial Amazon carbon flux dynamics and were deficient or absent from current model formulations. In conclusion, correctly simulating flux seasonality at tropical forests requires a greater understanding and the incorporation of internal biophysical mechanisms in future model developments.« less

Authors:
ORCiD logo [1]; ORCiD logo [2];  [3];  [4];  [5];  [6];  [7];  [6];  [8];  [9];  [10];  [11];  [12];  [4]
  1. Univ. of Technology Sydney, Sydney, NSW (Australia). Plant Functional Biology and Climate Change Cluster; Univ. of Arizona, Tucson, AZ (United States). Dept. of Ecology and Evolutionary Biology
  2. Univ. of Southern California, Los Angeles, CA (United States). Dept. of Biological Sciences; Harvard Univ., Cambridge, MA (United States). Dept. of Organismic and Evolutionary Biology
  3. Univ. of Arizona, Tucson, AZ (United States). Dept. of Ecology and Evolutionary Biology; Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Univ. of Arizona, Tucson, AZ (United States). Dept. of Atmospheric Sciences
  4. Univ. of Arizona, Tucson, AZ (United States). Dept. of Ecology and Evolutionary Biology
  5. Univ. of Arizona, Tucson, AZ (United States). Dept. of Ecology and Evolutionary Biology; Brookhaven National Lab, Upton, NY (United States). Biological, Environmental & Climate Sciences Dept.
  6. Federal Univ. of Vicosa, Vicosa (Brazil). Dept. of Agricultural Engineering
  7. Univ. of Leeds, Leeds (United Kingdom). School of Geography
  8. Inst. Nacional de Pesquisas da Amazonia (INPA), Manaus (Brazil)
  9. Inst. Nacional de Pesquisas da Amazonia (INPA), Manaus (Braz; Embrapa Amazonia Oriental, Belem (Brazil)
  10. Univ. of Oxford (United Kingdom). Environmental Change Inst.
  11. Univ. of Arizona, Tucson, AZ (United States). Dept. of of Atmospheric Sciences
  12. Harvard Univ., Cambridge, MA (United States). Dept. of Organismic and Evolutionary Biology
Publication Date:
Research Org.:
Brookhaven National Laboratory (BNL), Upton, NY (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
OSTI Identifier:
1341704
Report Number(s):
BNL-113452-2017-JA
Journal ID: ISSN 1354-1013; R&D Project: 21087; YN0100000
Grant/Contract Number:  
SC00112704
Resource Type:
Accepted Manuscript
Journal Name:
Global Change Biology
Additional Journal Information:
Journal Volume: 23; Journal Issue: 1; Journal ID: ISSN 1354-1013
Publisher:
Wiley
Country of Publication:
United States
Language:
English
Subject:
54 ENVIRONMENTAL SCIENCES; Amazonia; carbon dynamics; dynamic global vegetation models; ecosystem–climate interactions; eddy covariance; seasonality; tropical forests phenology

Citation Formats

Restrepo-Coupe, Natalia, Levine, Naomi M., Christoffersen, Bradley O., Albert, Loren P., Wu, Jin, Costa, Marcos H., Galbraith, David, Imbuzeiro, Hewlley, Martins, Giordane, da Araujo, Alessandro C., Malhi, Yadvinder S., Zeng, Xubin, Moorcroft, Paul, and Saleska, Scott R. Do dynamic global vegetation models capture the seasonality of carbon fluxes in the Amazon basin? A data-model intercomparison. United States: N. p., 2016. Web. doi:10.1111/gcb.13442.
Restrepo-Coupe, Natalia, Levine, Naomi M., Christoffersen, Bradley O., Albert, Loren P., Wu, Jin, Costa, Marcos H., Galbraith, David, Imbuzeiro, Hewlley, Martins, Giordane, da Araujo, Alessandro C., Malhi, Yadvinder S., Zeng, Xubin, Moorcroft, Paul, & Saleska, Scott R. Do dynamic global vegetation models capture the seasonality of carbon fluxes in the Amazon basin? A data-model intercomparison. United States. https://doi.org/10.1111/gcb.13442
Restrepo-Coupe, Natalia, Levine, Naomi M., Christoffersen, Bradley O., Albert, Loren P., Wu, Jin, Costa, Marcos H., Galbraith, David, Imbuzeiro, Hewlley, Martins, Giordane, da Araujo, Alessandro C., Malhi, Yadvinder S., Zeng, Xubin, Moorcroft, Paul, and Saleska, Scott R. Mon . "Do dynamic global vegetation models capture the seasonality of carbon fluxes in the Amazon basin? A data-model intercomparison". United States. https://doi.org/10.1111/gcb.13442. https://www.osti.gov/servlets/purl/1341704.
@article{osti_1341704,
title = {Do dynamic global vegetation models capture the seasonality of carbon fluxes in the Amazon basin? A data-model intercomparison},
author = {Restrepo-Coupe, Natalia and Levine, Naomi M. and Christoffersen, Bradley O. and Albert, Loren P. and Wu, Jin and Costa, Marcos H. and Galbraith, David and Imbuzeiro, Hewlley and Martins, Giordane and da Araujo, Alessandro C. and Malhi, Yadvinder S. and Zeng, Xubin and Moorcroft, Paul and Saleska, Scott R.},
abstractNote = {To predict forest response to long-term climate change with high confidence requires that dynamic global vegetation models (DGVMs) be successfully tested against ecosystem response to short-term variations in environmental drivers, including regular seasonal patterns. Here, we used an integrated dataset from four forests in the Brasil flux network, spanning a range of dry-season intensities and lengths, to determine how well four state-of-the-art models (IBIS, ED2, JULES, and CLM3.5) simulated the seasonality of carbon exchanges in Amazonian tropical forests. We found that most DGVMs poorly represented the annual cycle of gross primary productivity (GPP), of photosynthetic capacity (Pc), and of other fluxes and pools. Models simulated consistent dry-season declines in GPP in the equatorial Amazon (Manaus K34, Santarem K67, and Caxiuanã CAX); a contrast to observed GPP increases. Model simulated dry-season GPP reductions were driven by an external environmental factor, ‘soil water stress’ and consequently by a constant or decreasing photosynthetic infrastructure (Pc), while observed dry-season GPP resulted from a combination of internal biological (leaf-flush and abscission and increased Pc) and environmental (incoming radiation) causes. Moreover, we found models generally overestimated observed seasonal net ecosystem exchange (NEE) and respiration (Re) at equatorial locations. In contrast, a southern Amazon forest (Jarú RJA) exhibited dry-season declines in GPP and Re consistent with most DGVMs simulations. While water limitation was represented in models and the primary driver of seasonal photosynthesis in southern Amazonia, changes in internal biophysical processes, light-harvesting adaptations (e.g., variations in leaf area index (LAI) and increasing leaf-level assimilation rate related to leaf demography), and allocation lags between leaf and wood, dominated equatorial Amazon carbon flux dynamics and were deficient or absent from current model formulations. In conclusion, correctly simulating flux seasonality at tropical forests requires a greater understanding and the incorporation of internal biophysical mechanisms in future model developments.},
doi = {10.1111/gcb.13442},
journal = {Global Change Biology},
number = 1,
volume = 23,
place = {United States},
year = {Mon Aug 29 00:00:00 EDT 2016},
month = {Mon Aug 29 00:00:00 EDT 2016}
}

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Works referenced in this record:

A two-fold increase of carbon cycle sensitivity to tropical temperature variations
journal, January 2014

  • Wang, Xuhui; Piao, Shilong; Ciais, Philippe
  • Nature, Vol. 506, Issue 7487
  • DOI: 10.1038/nature12915

Phenology and CO 2 -assimilation of trees in Central Amazonian floodplains
journal, May 2000


Evaluation of ecosystem dynamics, plant geography and terrestrial carbon cycling in the LPJ dynamic global vegetation model
journal, February 2003


Photosynthetic seasonality of global tropical forests constrained by hydroclimate
journal, March 2015

  • Guan, Kaiyu; Pan, Ming; Li, Haibin
  • Nature Geoscience, Vol. 8, Issue 4
  • DOI: 10.1038/ngeo2382

Modeling seasonal and interannual variability in ecosystem carbon cycling for the Brazilian Amazon region
journal, May 2001

  • Potter, Christopher; Klooster, Steven; de Carvalho, Claudio Reis
  • Journal of Geophysical Research: Atmospheres, Vol. 106, Issue D10
  • DOI: 10.1029/2000JD900563

The role of ecosystem-atmosphere interactions in simulated Amazonian precipitation decrease and forest dieback under global climate warming
journal, May 2004

  • Betts, R. A.; Cox, P. M.; Collins, M.
  • Theoretical and Applied Climatology, Vol. 78, Issue 1-3
  • DOI: 10.1007/s00704-004-0050-y

Light and the Phenology of Tropical Trees
journal, January 1994

  • Wright, S. Joseph; van Schaik, Carel P.
  • The American Naturalist, Vol. 143, Issue 1
  • DOI: 10.1086/285600

The response of an Eastern Amazonian rain forest to drought stress: results and modelling analyses from a throughfall exclusion experiment
journal, November 2007


Surface ecophysiological behavior across vegetation and moisture gradients in tropical South America
journal, December 2013


Carbon residence time dominates uncertainty in terrestrial vegetation responses to future climate and atmospheric CO 2
journal, December 2013

  • Friend, Andrew D.; Lucht, Wolfgang; Rademacher, Tim T.
  • Proceedings of the National Academy of Sciences, Vol. 111, Issue 9
  • DOI: 10.1073/pnas.1222477110

Confronting model predictions of carbon fluxes with measurements of Amazon forests subjected to experimental drought
journal, July 2013

  • Powell, Thomas L.; Galbraith, David R.; Christoffersen, Bradley O.
  • New Phytologist, Vol. 200, Issue 2
  • DOI: 10.1111/nph.12390

Improvements to the Community Land Model and their impact on the hydrological cycle: COMMUNITY LAND MODEL HYDROLOGY
journal, March 2008

  • Oleson, K. W.; Niu, G. -Y.; Yang, Z. -L.
  • Journal of Geophysical Research: Biogeosciences, Vol. 113, Issue G1
  • DOI: 10.1029/2007JG000563

Seasonality and Phenology in a Dry Tropical Forest in Ghana
journal, November 1982

  • Lieberman, Diana
  • The Journal of Ecology, Vol. 70, Issue 3
  • DOI: 10.2307/2260105

Summarizing multiple aspects of model performance in a single diagram
journal, April 2001

  • Taylor, Karl E.
  • Journal of Geophysical Research: Atmospheres, Vol. 106, Issue D7
  • DOI: 10.1029/2000JD900719

Terrestrial Carbon Cycle: Climate Relations in Eight CMIP5 Earth System Models
journal, November 2013


Leaf development and demography explain photosynthetic seasonality in Amazon evergreen forests
journal, February 2016


Canopy reflectance, photosynthesis and transpiration
journal, August 1985


Diversity of Flowering and Fruiting Phenology of Trees in a Tropical Deciduous Forest in India
journal, December 2005

  • Singh, K. P.; Kushwaha, C. P.
  • Annals of Botany, Vol. 97, Issue 2
  • DOI: 10.1093/aob/mcj028

Seasonal carbon dynamics and water fluxes in an Amazon rainforest
journal, January 2012


Temperate and boreal forest tree phenology: from organ-scale processes to terrestrial ecosystem models
journal, March 2016

  • Delpierre, Nicolas; Vitasse, Yann; Chuine, Isabelle
  • Annals of Forest Science, Vol. 73, Issue 1
  • DOI: 10.1007/s13595-015-0477-6

Seasonality in CO 2 and H 2 O flux at an eastern Amazonian rain forest
journal, January 2002


Simulated resilience of tropical rainforests to CO2-induced climate change
journal, March 2013

  • Huntingford, Chris; Zelazowski, Przemyslaw; Galbraith, David
  • Nature Geoscience, Vol. 6, Issue 4
  • DOI: 10.1038/ngeo1741

Parameterization of Canopy Structure and Leaf-Level Gas Exchange for an Eastern Amazonian Tropical Rain Forest (Tapajós National Forest, Pará, Brazil)
journal, October 2005

  • Domingues, Tomas F.; Berry, Joseph A.; Martinelli, Luiz A.
  • Earth Interactions, Vol. 9, Issue 17
  • DOI: 10.1175/EI149.1

Carbon Balance and Vegetation Dynamics in an Old-Growth Amazonian Forest
journal, August 2004

  • Rice, Amy H.; Pyle, Elizabeth Hammond; Saleska, Scott R.
  • Ecological Applications, Vol. 14, Issue sp4
  • DOI: 10.1890/02-6006

The Robustness of eddy Correlation Fluxes for Amazon rain Forest Conditions
journal, August 2004

  • Kruijt, B.; Elbers, J. A.; von Randow, C.
  • Ecological Applications, Vol. 14, Issue sp4
  • DOI: 10.1890/02-6004

Seasonal leaf dynamics for tropical evergreen forests in a process-based global ecosystem model
journal, January 2012

  • De Weirdt, M.; Verbeeck, H.; Maignan, F.
  • Geoscientific Model Development, Vol. 5, Issue 5
  • DOI: 10.5194/gmd-5-1091-2012

Seasonality of Water and heat Fluxes over a Tropical Forest in Eastern Amazonia
journal, August 2004

  • da Rocha, Humberto R.; Goulden, Michael L.; Miller, Scott D.
  • Ecological Applications, Vol. 14, Issue sp4
  • DOI: 10.1890/02-6001

Sensitivity of tropical carbon to climate change constrained by carbon dioxide variability
journal, February 2013

  • Cox, Peter M.; Pearson, David; Booth, Ben B.
  • Nature, Vol. 494, Issue 7437
  • DOI: 10.1038/nature11882

An evaluation of models for partitioning eddy covariance-measured net ecosystem exchange into photosynthesis and respiration
journal, December 2006


Is the data collection period of the Large-Scale Biosphere-Atmosphere Experiment in Amazonia representative of long-term climatology?: LBA DATA REPRESENTATIVE OF CLIMATOLOGY
journal, March 2008

  • Rosolem, Rafael; Shuttleworth, William James; de Gonçalves, Luis Gustavo Gonçalves
  • Journal of Geophysical Research: Biogeosciences, Vol. 113, Issue G1
  • DOI: 10.1029/2007JG000628

Allocation trade-offs dominate the response of tropical forest growth to seasonal and interannual drought
journal, August 2014

  • Doughty, Christopher E.; Malhi, Yadvinder; Araujo-Murakami, Alejandro
  • Ecology, Vol. 95, Issue 8
  • DOI: 10.1890/13-1507.1

Annual tree rings revealed by radiocarbon dating in seasonally flooded forest of the Mapire River, a tributary of the lower Orinoco River, Venezuela
journal, January 2003

  • Dezzeo, Nelda; Worbes, Martin; Ishii, Iria
  • Plant Ecology, Vol. 168, Issue 1, p. 165-175
  • DOI: 10.1023/A:1024417610776

Climate–Carbon Cycle Feedback Analysis: Results from the C 4 MIP Model Intercomparison
journal, July 2006

  • Friedlingstein, P.; Cox, P.; Betts, R.
  • Journal of Climate, Vol. 19, Issue 14
  • DOI: 10.1175/JCLI3800.1

Seasonal leaf dynamics in an Amazonian tropical forest
journal, September 2009

  • Malhado, Ana C. M.; Costa, Marcos H.; de Lima, Francisca Z.
  • Forest Ecology and Management, Vol. 258, Issue 7
  • DOI: 10.1016/j.foreco.2009.06.002

Seasonal patterns of tropical forest leaf area index and CO 2 exchange : TROPICAL FOREST CO
journal, March 2008

  • Doughty, Christopher E.; Goulden, Michael L.
  • Journal of Geophysical Research: Biogeosciences, Vol. 113, Issue G1
  • DOI: 10.1029/2007JG000590

Relative contributions of soil, foliar, and woody tissue respiration to total ecosystem respiration in four pine forests of different ages
journal, January 2010

  • Khomik, Myroslava; Arain, M. Altaf; Brodeur, Jason J.
  • Journal of Geophysical Research, Vol. 115, Issue G3
  • DOI: 10.1029/2009JG001089

Evaluation of the New CNDV Option of the Community Land Model: Effects of Dynamic Vegetation and Interactive Nitrogen on CLM4 Means and Variability
journal, June 2012

  • Gotangco Castillo, C. Kendra; Levis, Samuel; Thornton, Peter
  • Journal of Climate, Vol. 25, Issue 11
  • DOI: 10.1175/JCLI-D-11-00372.1

The dominant role of semi-arid ecosystems in the trend and variability of the land CO2 sink
journal, May 2015


Inter-annual variability of carbon and water fluxes in Amazonian forest, Cerrado and pasture sites, as simulated by terrestrial biosphere models
journal, December 2013


Leaf aging of Amazonian canopy trees as revealed by spectral and physiochemical measurements
journal, February 2016

  • Chavana-Bryant, Cecilia; Malhi, Yadvinder; Wu, Jin
  • New Phytologist, Vol. 214, Issue 3
  • DOI: 10.1111/nph.13853

Estimating the risk of Amazonian forest dieback
journal, June 2010


Mechanisms of water supply and vegetation demand govern the seasonality and magnitude of evapotranspiration in Amazonia and Cerrado
journal, June 2014


Cloud cover limits net CO2 uptake and growth of a rainforest tree during tropical rainy seasons
journal, January 2003

  • Graham, E. A.; Mulkey, S. S.; Kitajima, K.
  • Proceedings of the National Academy of Sciences, Vol. 100, Issue 2
  • DOI: 10.1073/pnas.0133045100

Ecology of Tropical Dry Forest
journal, November 1986


The TRMM Multisatellite Precipitation Analysis (TMPA): Quasi-Global, Multiyear, Combined-Sensor Precipitation Estimates at Fine Scales
journal, February 2007

  • Huffman, George J.; Bolvin, David T.; Nelkin, Eric J.
  • Journal of Hydrometeorology, Vol. 8, Issue 1
  • DOI: 10.1175/JHM560.1

Climate Calculations with a Combined Ocean-Atmosphere Model
journal, July 1969


Seasonal and interannual variability of climate and vegetation indices across the Amazon
journal, August 2010

  • Brando, P. M.; Goetz, S. J.; Baccini, A.
  • Proceedings of the National Academy of Sciences, Vol. 107, Issue 33
  • DOI: 10.1073/pnas.0908741107

Amazon forests maintain consistent canopy structure and greenness during the dry season
journal, February 2014

  • Morton, Douglas C.; Nagol, Jyoteshwar; Carabajal, Claudia C.
  • Nature, Vol. 506, Issue 7487
  • DOI: 10.1038/nature13006

The local and global effects of Amazon deforestation
journal, January 2002


Improving simulated Amazon forest biomass and productivity by including spatial variation in biophysical parameters
journal, January 2013


A simple and fast numerical method for the computation of daily totals of crop photosynthesis
journal, October 1986


Amazon Forests Green-Up During 2005 Drought
journal, September 2007


Comparative measurements of carbon dioxide fluxes from two nearby towers in a central Amazonian rainforest: The Manaus LBA site
journal, January 2002


An integrated biosphere model of land surface processes, terrestrial carbon balance, and vegetation dynamics
journal, December 1996

  • Foley, Jonathan A.; Prentice, I. Colin; Ramankutty, Navin
  • Global Biogeochemical Cycles, Vol. 10, Issue 4
  • DOI: 10.1029/96GB02692

Robustness and uncertainty in terrestrial ecosystem carbon response to CMIP5 climate change projections
journal, October 2012


The evolution of, and revolution in, land surface schemes designed for climate models
journal, January 2003

  • Pitman, A. J.
  • International Journal of Climatology, Vol. 23, Issue 5
  • DOI: 10.1002/joc.893

Patterns of water and heat flux across a biome gradient from tropical forest to savanna in Brazil
journal, January 2009

  • da Rocha, Humberto R.; Manzi, Antonio O.; Cabral, Osvaldo M.
  • Journal of Geophysical Research, Vol. 114
  • DOI: 10.1029/2007JG000640

Modelling multi-year coupled carbon and water fluxes in a boreal aspen forest
journal, November 2006


Seasonal drought stress in the Amazon: Reconciling models and observations: TAPAJOS km 83 NEE ANNUAL CYCLE
journal, March 2008

  • Baker, I. T.; Prihodko, L.; Denning, A. S.
  • Journal of Geophysical Research: Biogeosciences, Vol. 113, Issue G1
  • DOI: 10.1029/2007JG000644

Natural and drought scenarios in an east central Amazon forest: Fidelity of the Community Land Model 3.5 with three biogeochemical models
journal, January 2011

  • Sakaguchi, Koichi; Zeng, Xubin; Christoffersen, Bradley J.
  • Journal of Geophysical Research, Vol. 116, Issue G1
  • DOI: 10.1029/2010JG001477

Precipitation recycling in the Amazon basin
journal, July 1994

  • Eltahir, E. A. B.; Bras, R. L.
  • Quarterly Journal of the Royal Meteorological Society, Vol. 120, Issue 518
  • DOI: 10.1002/qj.49712051806

The Joint UK Land Environment Simulator (JULES), model description – Part 2: Carbon fluxes and vegetation dynamics
journal, January 2011

  • Clark, D. B.; Mercado, L. M.; Sitch, S.
  • Geoscientific Model Development, Vol. 4, Issue 3
  • DOI: 10.5194/gmd-4-701-2011

Amazon rainforests green-up with sunlight in dry season
journal, January 2006

  • Huete, Alfredo R.; Didan, Kamel; Shimabukuro, Yosio E.
  • Geophysical Research Letters, Vol. 33, Issue 6
  • DOI: 10.1029/2005GL025583

Moving beyond photosynthesis: from carbon source to sink-driven vegetation modeling
journal, November 2013

  • Fatichi, Simone; Leuzinger, Sebastian; Körner, Christian
  • New Phytologist, Vol. 201, Issue 4
  • DOI: 10.1111/nph.12614

Tree damage, allometric relationships, and above-ground net primary production in central Amazon forest
journal, October 2001

  • Chambers, Jeffrey Q.; Santos, Joaquim dos; Ribeiro, Ralfh J.
  • Forest Ecology and Management, Vol. 152, Issue 1-3
  • DOI: 10.1016/S0378-1127(00)00591-0

Overview of the Large-Scale Biosphere–Atmosphere Experiment in Amazonia Data Model Intercomparison Project (LBA-DMIP)
journal, December 2013

  • de Gonçalves, Luis Gustavo Gonçalves; Borak, Jordan S.; Costa, Marcos Heil
  • Agricultural and Forest Meteorology, Vol. 182-183
  • DOI: 10.1016/j.agrformet.2013.04.030

Insolation and photoperiodic control of tree development near the equator
journal, September 2014

  • Borchert, Rolf; Calle, Zoraida; Strahler, Alan H.
  • New Phytologist, Vol. 205, Issue 1
  • DOI: 10.1111/nph.12981

What drives the seasonality of photosynthesis across the Amazon basin? A cross-site analysis of eddy flux tower measurements from the Brasil flux network
journal, December 2013


Earth System Model, Modeling the Land Component of
book, January 2012


Distribution and mixing of old and new nonstructural carbon in two temperate trees
journal, January 2015

  • Richardson, Andrew D.; Carbone, Mariah S.; Huggett, Brett A.
  • New Phytologist, Vol. 206, Issue 2
  • DOI: 10.1111/nph.13273

Global synthesis of leaf area index observations: implications for ecological and remote sensing studies: Global leaf area index
journal, April 2003


Physiological and environmental regulation of stomatal conductance, photosynthesis and transpiration: a model that includes a laminar boundary layer
journal, April 1991

  • Collatz, G. James; Ball, J. Timothy; Grivet, Cyril
  • Agricultural and Forest Meteorology, Vol. 54, Issue 2-4
  • DOI: 10.1016/0168-1923(91)90002-8

Seasonal trends of Amazonian rainforest phenology, net primary productivity, and carbon allocation: Seasonal Trends of Amazonian Forests
journal, May 2016

  • Girardin, Cécile A. J.; Malhi, Yadvinder; Doughty, Christopher E.
  • Global Biogeochemical Cycles, Vol. 30, Issue 5
  • DOI: 10.1002/2015GB005270

The sensitivity of wood production to seasonal and interannual variations in climate in a lowland Amazonian rainforest
journal, September 2013


Regional and seasonal patterns of litterfall in tropical South America
journal, January 2010


Variations in atmospheric CO2 growth rates coupled with tropical temperature
journal, July 2013

  • Wang, W.; Ciais, P.; Nemani, R. R.
  • Proceedings of the National Academy of Sciences, Vol. 110, Issue 32
  • DOI: 10.1073/pnas.1219683110

Dry-season greening of Amazon forests
journal, March 2016

  • Saleska, Scott R.; Wu, Jin; Guan, Kaiyu
  • Nature, Vol. 531, Issue 7594
  • DOI: 10.1038/nature16457

Measuring Biosphere-Atmosphere Exchanges of Biologically Related Gases with Micrometeorological Methods
journal, October 1988

  • Baldocchi, Dennis D.; Hincks, Bruce B.; Meyers, Tilden P.
  • Ecology, Vol. 69, Issue 5
  • DOI: 10.2307/1941631

Effect of 7 yr of experimental drought on vegetation dynamics and biomass storage of an eastern Amazonian rainforest
journal, June 2010


Photosynthetic capacity in a central Amazonian rain forest
journal, February 2000


Non-structural carbohydrate pools in a tropical forest
journal, December 2004

  • Würth, Mirjam K. R.; Peláez-Riedl, Susanna; Wright, S. Joseph.
  • Oecologia, Vol. 143, Issue 1
  • DOI: 10.1007/s00442-004-1773-2

The impact of new land surface physics on the GCM simulation of climate and climate sensitivity
journal, March 1999


Leaf flush drives dry season green-up of the Central Amazon
journal, September 2016


The Joint UK Land Environment Simulator (JULES), model description – Part 1: Energy and water fluxes
journal, January 2011

  • Best, M. J.; Pryor, M.; Clark, D. B.
  • Geoscientific Model Development, Vol. 4, Issue 3
  • DOI: 10.5194/gmd-4-677-2011

Water Availability Is the Main Climate Driver of Neotropical Tree Growth
journal, April 2012


A Method for Scaling Vegetation Dynamics: the Ecosystem Demography Model (ed)
journal, November 2001


Ecosystem heterogeneity determines the ecological resilience of the Amazon to climate change
journal, December 2015

  • Levine, Naomi M.; Zhang, Ke; Longo, Marcos
  • Proceedings of the National Academy of Sciences, Vol. 113, Issue 3
  • DOI: 10.1073/pnas.1511344112

Direct and Indirect Estimation of Leaf Area Index, fAPAR, and Net Primary Production of Terrestrial Ecosystems
journal, October 1999


Amazon forests did not green-up during the 2005 drought: AMAZON DROUGHT SENSITIVITY
journal, March 2010

  • Samanta, Arindam; Ganguly, Sangram; Hashimoto, Hirofumi
  • Geophysical Research Letters, Vol. 37, Issue 5
  • DOI: 10.1029/2009GL042154

A biochemical model of photosynthetic CO2 assimilation in leaves of C3 species
journal, June 1980

  • Farquhar, G. D.; von Caemmerer, S.; Berry, J. A.
  • Planta, Vol. 149, Issue 1
  • DOI: 10.1007/BF00386231

Mechanistic scaling of ecosystem function and dynamics in space and time: Ecosystem Demography model version 2
journal, January 2009

  • Medvigy, D.; Wofsy, S. C.; Munger, J. W.
  • Journal of Geophysical Research, Vol. 114, Issue G1
  • DOI: 10.1029/2008JG000812

Carbon in Amazon Forests: Unexpected Seasonal Fluxes and Disturbance-Induced Losses
journal, November 2003


Coupled Photosynthesis-Stomatal Conductance Model for Leaves of C4 Plants
journal, January 1992

  • Collatz, Gj; Ribas-Carbo, M.; Berry, Ja
  • Functional Plant Biology, Vol. 19, Issue 5
  • DOI: 10.1071/PP9920519

A Method for Scaling Vegetation Dynamics: The Ecosystem Demography Model (ED)
journal, November 2001

  • Moorcroft, P. R.; Hurtt, G. C.; Pacala, S. W.
  • Ecological Monographs, Vol. 71, Issue 4
  • DOI: 10.2307/3100036

Temperate and boreal forest tree phenology: from organ-scale processes to terrestrial ecosystem models
text, January 2016


Environmental variation is directly responsible for short- but not long-term variation in forest-atmosphere carbon exchange
journal, March 2007


The Joint UK Land Environment Simulator (JULES), Model description – Part 1: Energy and water fluxes
journal, January 2011

  • Best, M. J.; Pryor, M.; Clark, D. B.
  • Geoscientific Model Development Discussions, Vol. 4, Issue 1
  • DOI: 10.5194/gmdd-4-595-2011

Works referencing / citing this record:

Evaluation of the New Dynamic Global Vegetation Model in CAS-ESM
journal, April 2018

  • Zhu, Jiawen; Zeng, Xiaodong; Zhang, Minghua
  • Advances in Atmospheric Sciences, Vol. 35, Issue 6
  • DOI: 10.1007/s00376-017-7154-7

Drought, Heat, and the Carbon Cycle: a Review
journal, June 2018

  • Sippel, Sebastian; Reichstein, Markus; Ma, Xuanlong
  • Current Climate Change Reports, Vol. 4, Issue 3
  • DOI: 10.1007/s40641-018-0103-4

Dry-Season Greening and Water Stress in Amazonia: The Role of Modeling Leaf Phenology
journal, June 2018

  • Manoli, Gabriele; Ivanov, Valeriy Y.; Fatichi, Simone
  • Journal of Geophysical Research: Biogeosciences, Vol. 123, Issue 6
  • DOI: 10.1029/2017jg004282

Large‐Scale Droughts Responsible for Dramatic Reductions of Terrestrial Net Carbon Uptake Over North America in 2011 and 2012
journal, July 2018

  • He, Wei; Ju, Weimin; Schwalm, Christopher R.
  • Journal of Geophysical Research: Biogeosciences, Vol. 123, Issue 7
  • DOI: 10.1029/2018jg004520

Surface‐Atmosphere Coupling Scale, the Fate of Water, and Ecophysiological Function in a Brazilian Forest
journal, August 2019

  • Baker, Ian T.; Denning, A. Scott; Dazlich, Don A.
  • Journal of Advances in Modeling Earth Systems, Vol. 11, Issue 8
  • DOI: 10.1029/2019ms001650

Potential shift from a carbon sink to a source in Amazonian peatlands under a changing climate
journal, November 2018

  • Wang, Sirui; Zhuang, Qianlai; Lähteenoja, Outi
  • Proceedings of the National Academy of Sciences, Vol. 115, Issue 49
  • DOI: 10.1073/pnas.1801317115

Current and future patterns of fire-induced forest degradation in Amazonia
journal, September 2017

  • De Faria, Bruno L.; Brando, Paulo M.; Macedo, Marcia N.
  • Environmental Research Letters, Vol. 12, Issue 9
  • DOI: 10.1088/1748-9326/aa69ce

Regional contribution to variability and trends of global gross primary productivity
journal, September 2017

  • Chen, Min; Rafique, Rashid; Asrar, Ghassem R.
  • Environmental Research Letters, Vol. 12, Issue 10
  • DOI: 10.1088/1748-9326/aa8978

Higher absorbed solar radiation partly offset the negative effects of water stress on the photosynthesis of Amazon forests during the 2015 drought
journal, March 2018


Ecohydrological changes after tropical forest conversion to oil palm
journal, June 2018

  • Manoli, Gabriele; Meijide, Ana; Huth, Neil
  • Environmental Research Letters, Vol. 13, Issue 6
  • DOI: 10.1088/1748-9326/aac54e

Widespread reduction in sun-induced fluorescence from the Amazon during the 2015/2016 El Niño
journal, October 2018

  • Koren, Gerbrand; van Schaik, Erik; Araújo, Alessandro C.
  • Philosophical Transactions of the Royal Society B: Biological Sciences, Vol. 373, Issue 1760
  • DOI: 10.1098/rstb.2017.0408

Large-scale prerain vegetation green-up across Africa
journal, June 2018

  • Adole, Tracy; Dash, Jadunandan; Atkinson, Peter M.
  • Global Change Biology, Vol. 24, Issue 9
  • DOI: 10.1111/gcb.14310

Cryptic phenology in plants: Case studies, implications, and recommendations
journal, August 2019

  • Albert, Loren P.; Restrepo‐Coupe, Natalia; Smith, Marielle N.
  • Global Change Biology, Vol. 25, Issue 11
  • DOI: 10.1111/gcb.14759

Age-dependent leaf physiology and consequences for crown-scale carbon uptake during the dry season in an Amazon evergreen forest
journal, March 2018

  • Albert, Loren P.; Wu, Jin; Prohaska, Neill
  • New Phytologist, Vol. 219, Issue 3
  • DOI: 10.1111/nph.15056

Seasonal and drought‐related changes in leaf area profiles depend on height and light environment in an Amazon forest
journal, February 2019

  • Smith, Marielle N.; Stark, Scott C.; Taylor, Tyeen C.
  • New Phytologist, Vol. 222, Issue 3
  • DOI: 10.1111/nph.15726

Hydraulic traits explain differential responses of Amazonian forests to the 2015 El Niño‐induced drought
journal, May 2019

  • Barros, Fernanda de V.; Bittencourt, Paulo R. L.; Brum, Mauro
  • New Phytologist, Vol. 223, Issue 3
  • DOI: 10.1111/nph.15909

The importance of physiological, structural and trait responses to drought stress in driving spatial and temporal variation in GPP across Amazon forests
journal, January 2019

  • Flack-Prain, Sophie; Meir, Patrick; Malhi, Yadvinder
  • Biogeosciences, Vol. 16, Issue 22
  • DOI: 10.5194/bg-16-4463-2019

Ecosystem heterogeneity and diversity mitigate Amazon forest resilience to frequent extreme droughts
journal, May 2018

  • Longo, Marcos; Knox, Ryan G.; Levine, Naomi M.
  • New Phytologist, Vol. 219, Issue 3
  • DOI: 10.1111/nph.15185

Phenological and structural linkages to seasonality inform productivity relationships in the Amazon Rainforest
journal, February 2019

  • Atkins, Jeff W.; Agee, Elizabeth
  • New Phytologist, Vol. 222, Issue 3
  • DOI: 10.1111/nph.15783

Upside-down fluxes Down Under: CO 2 net sink in winter and net source in summer in a temperate evergreen broadleaf forest
journal, January 2018

  • Renchon, Alexandre A.; Griebel, Anne; Metzen, Daniel
  • Biogeosciences, Vol. 15, Issue 12
  • DOI: 10.5194/bg-15-3703-2018

A continental‐scale assessment of variability in leaf traits: Within species, across sites and between seasons
journal, April 2018

  • Bloomfield, Keith J.; Cernusak, Lucas A.; Eamus, Derek
  • Functional Ecology, Vol. 32, Issue 6
  • DOI: 10.1111/1365-2435.13097

Joint structural and physiological control on the interannual variation in productivity in a temperate grassland: A data-model comparison
journal, May 2018

  • Hu, Zhongmin; Shi, Hao; Cheng, Kaili
  • Global Change Biology, Vol. 24, Issue 7
  • DOI: 10.1111/gcb.14274

Drought, Heat, and the Carbon Cycle: a Review
text, January 2018


Ecohydrological changes after tropical forest conversion to oil palm
text, January 2018


Reviews and syntheses: Carbonyl sulfide as a multi-scale tracer for carbon and water cycles
journal, January 2018

  • Whelan, Mary E.; Lennartz, Sinikka T.; Gimeno, Teresa E.
  • Biogeosciences, Vol. 15, Issue 12
  • DOI: 10.5194/bg-15-3625-2018

Widespread reduction in sun-induced fluorescence from the Amazon during the 2015/2016 El Niño
journal, October 2018

  • Koren, Gerbrand; van Schaik, Erik; Araújo, Alessandro C.
  • Philosophical Transactions of the Royal Society B: Biological Sciences, Vol. 373, Issue 1760
  • DOI: 10.1098/rstb.2017.0408