Two poplar-associated bacterial isolates induce additive favorable responses in a constructed plant-microbiome system

Jawdy, Sara S.; Gunter, Lee E.; Engle, Nancy L.; Yang, Zamin Koo; Lu, Tse-Yuan S.; Tschaplinski, Timothy J.; Tuskan, Gerald A.; Doktycz, Mitchel John; Pelletier, Dale A.; Weston, David J.; Timm, Colin M.; Henning, Jeremiah A.; Aufrecht, Jayde; Gee, Emily; Nookaew, Intawat

doi:10.3389/fpls.2016.00497

Title: Two poplar-associated bacterial isolates induce additive favorable responses in a constructed plant-microbiome system

Journal Article · Tue Apr 26 00:00:00 EDT 2016 · Frontiers in Plant Science

DOI: https://doi.org/10.3389/fpls.2016.00497 · OSTI ID:1255679

Jawdy, Sara S. ^[1]; Gunter, Lee E. ^[1]; Engle, Nancy L. ^[1]; Yang, Zamin Koo ^[1]; Lu, Tse-Yuan S. ^[1]; Tschaplinski, Timothy J. ^[1]; Tuskan, Gerald A. ^[1]; Doktycz, Mitchel John ^[1]; Pelletier, Dale A. ^[1]; Weston, David J. ^[1]; Timm, Colin M. ^[1]; Henning, Jeremiah A. ^[2]; Aufrecht, Jayde ^[3]; Gee, Emily ^[1]; Nookaew, Intawat ^[1]

Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
Univ. of Tennessee, Knoxville, TN (United States)
Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Univ. of Tennessee, Knoxville, TN (United States)

Here, the biological function of the plant-microbiome system is the result of contributions from the host plant and microbiome members. In this work we study the function of a simplified community consisting of Pseudomonas and Burkholderia bacterial strains isolated from Populus hosts and inoculated on axenic Populus cutting in controlled laboratory conditions. Inoculation individually with either bacterial isolate increased root growth relative to uninoculated controls. Root area, photosynthetic efficiency, gene expression and metabolite expression data in individual and dual inoculated treatments indicate that the effects of these bacteria are unique and additive, suggesting that the function of a microbiome community may be predicted from the additive functions of the individual members.

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Research Organization:: Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)

Sponsoring Organization:: USDOE Office of Science (SC)

Grant/Contract Number:: AC05-00OR22725

OSTI ID:: 1255679

Journal Information:: Frontiers in Plant Science, Journal Name: Frontiers in Plant Science Journal Issue: 1 Vol. 7; ISSN 1664-462X

Publisher:: Frontiers Research FoundationCopyright Statement

Country of Publication:: United States

Language:: English

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Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa Lebeis, S. L.; Paredes, S. H.; Lundberg, D. S. Science, Vol. 349, Issue 6250 https://doi.org/10.1126/science.aaa8764	journal	July 2015
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Distinct Microbial Communities within the Endosphere and Rhizosphere of Populus deltoides Roots across Contrasting Soil Types Gottel, Neil R.; Castro, Hector F.; Kerley, Marilyn Applied and Environmental Microbiology, Vol. 77, Issue 17 https://doi.org/10.1128/AEM.05255-11	journal	July 2011
Role of Capsular Colanic Acid in Adhesion of Uropathogenic Escherichia coli Hanna, A.; Berg, M.; Stout, V. Applied and Environmental Microbiology, Vol. 69, Issue 8 https://doi.org/10.1128/AEM.69.8.4474-4481.2003	journal	August 2003
Diversity of Pseudomonas Genomes, Including Populus-Associated Isolates, as Revealed by Comparative Genome Analysis Jun, Se-Ran; Wassenaar, Trudy M.; Nookaew, Intawat Applied and Environmental Microbiology, Vol. 82, Issue 1 https://doi.org/10.1128/aem.02612-15	journal	October 2015
Twenty-One Genome Sequences from Pseudomonas Species and 19 Genome Sequences from Diverse Bacteria Isolated from the Rhizosphere and Endosphere of Populus deltoides Brown, S. D.; Utturkar, S. M.; Klingeman, D. M. Journal of Bacteriology, Vol. 194, Issue 21 https://doi.org/10.1128/jb.01243-12	journal	October 2012
Transcriptome Profiling of the Endophyte Burkholderia phytofirmans PsJN Indicates Sensing of the Plant Environment and Drought Stress Sheibani-Tezerji, Raheleh; Rattei, Thomas; Sessitsch, Angela mBio, Vol. 6, Issue 5 https://doi.org/10.1128/mBio.00621-15	journal	September 2015
Transcriptome Profiling of the Endophyte Burkholderia phytofirmans PsJN Indicates Sensing of the Plant Environment and Drought Stress Sheibani-Tezerji, Raheleh; Rattei, Thomas; Sessitsch, Angela mBio, Vol. 6, Issue 5 https://doi.org/10.1128/mbio.00621-15	journal	September 2015
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Plant growth promotion induced by phosphate solubilizing endophytic Pseudomonas isolates Oteino, Nicholas; Lally, Richard D.; Kiwanuka, Samuel Frontiers in Microbiology, Vol. 6 https://doi.org/10.3389/fmicb.2015.00745	journal	July 2015
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Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment Timm, Collin M.; Campbell, Alisha G.; Utturkar, Sagar M. Frontiers in Microbiology, Vol. 6 https://doi.org/10.3389/fmicb.2015.01118	journal	October 2015
Comparative genome analysis of Burkholderia phytofirmans PsJN reveals a wide spectrum of endophytic lifestyles based on interaction strategies with host plants Mitter, Birgit; Petric, Alexandra; Shin, Maria W. Frontiers in Plant Science, Vol. 4 https://doi.org/10.3389/fpls.2013.00120	journal	January 2013
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A Synthetic Community Approach Reveals Plant Genotypes Affecting the Phyllosphere Microbiota Bodenhausen, Natacha; Bortfeld-Miller, Miriam; Ackermann, Martin ETH Zurich https://doi.org/10.3929/ethz-b-000084841	text	January 2014
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