Structure and Function of Fusicoccadiene Synthase, a Hexameric Bifunctional Diterpene Synthase
Abstract
Fusicoccin A is a diterpene glucoside phytotoxin generated by the fungal pathogen Phomopsis amygdali that causes the plant disease constriction canker, first discovered in New Jersey peach orchards in the 1930s. Fusicoccin A is also an emerging new lead in cancer chemotherapy. The hydrocarbon precursor of fusicoccin A is the tricyclic diterpene fusicoccadiene, which is generated by a bifunctional terpenoid synthase. Here, we report X-ray crystal structures of the individual catalytic domains of fusicoccadiene synthase: the C-terminal domain is a chain elongation enzyme that generates geranylgeranyl diphosphate, and the N-terminal domain catalyzes the cyclization of geranylgeranyl diphosphate to form fusicoccadiene. Here, crystal structures of each domain complexed with bisphosphonate substrate analogues suggest that three metal ions and three positively charged amino acid side chains trigger substrate ionization in each active site. While in vitro incubations reveal that the cyclase domain can utilize farnesyl diphosphate and geranyl diphosphate as surrogate substrates, these shorter isoprenoid diphosphates are mainly converted into acyclic alcohol or hydrocarbon products. Gel filtration chromatography and analytical ultracentrifugation experiments indicate that full-length fusicoccadiene synthase adopts hexameric quaternary structure, and small-angle X-ray scattering data yield a well-defined molecular envelope illustrating a plausible model for hexamer assembly.
- Authors:
-
- Univ. of Pennsylvania, Philadelphia, PA (United States)
- Brown Univ., Providence, RI (United States)
- Yamagata Univ. (Japan)
- Univ. of Pennsylvania, Philadelphia, PA (United States); Harvard Univ., Cambridge, MA (United States)
- Publication Date:
- Research Org.:
- Argonne National Laboratory (ANL), Argonne, IL (United States)
- Sponsoring Org.:
- USDOE; National Institutes of Health (NIH)
- OSTI Identifier:
- 1249236
- Grant/Contract Number:
- AC02-06CH11357; P41 GM103403; S10 RR029205
- Resource Type:
- Accepted Manuscript
- Journal Name:
- ACS Chemical Biology
- Additional Journal Information:
- Journal Volume: 11; Journal Issue: 4; Journal ID: ISSN 1554-8929
- Publisher:
- American Chemical Society (ACS)
- Country of Publication:
- United States
- Language:
- ENGLISH
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; 37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY
Citation Formats
Chen, Mengbin, Chou, Wayne K. W., Toyomasu, Tomonobu, Cane, David E., and Christianson, David W. Structure and Function of Fusicoccadiene Synthase, a Hexameric Bifunctional Diterpene Synthase. United States: N. p., 2016.
Web. doi:10.1021/acschembio.5b00960.
Chen, Mengbin, Chou, Wayne K. W., Toyomasu, Tomonobu, Cane, David E., & Christianson, David W. Structure and Function of Fusicoccadiene Synthase, a Hexameric Bifunctional Diterpene Synthase. United States. https://doi.org/10.1021/acschembio.5b00960
Chen, Mengbin, Chou, Wayne K. W., Toyomasu, Tomonobu, Cane, David E., and Christianson, David W. Wed .
"Structure and Function of Fusicoccadiene Synthase, a Hexameric Bifunctional Diterpene Synthase". United States. https://doi.org/10.1021/acschembio.5b00960. https://www.osti.gov/servlets/purl/1249236.
@article{osti_1249236,
title = {Structure and Function of Fusicoccadiene Synthase, a Hexameric Bifunctional Diterpene Synthase},
author = {Chen, Mengbin and Chou, Wayne K. W. and Toyomasu, Tomonobu and Cane, David E. and Christianson, David W.},
abstractNote = {Fusicoccin A is a diterpene glucoside phytotoxin generated by the fungal pathogen Phomopsis amygdali that causes the plant disease constriction canker, first discovered in New Jersey peach orchards in the 1930s. Fusicoccin A is also an emerging new lead in cancer chemotherapy. The hydrocarbon precursor of fusicoccin A is the tricyclic diterpene fusicoccadiene, which is generated by a bifunctional terpenoid synthase. Here, we report X-ray crystal structures of the individual catalytic domains of fusicoccadiene synthase: the C-terminal domain is a chain elongation enzyme that generates geranylgeranyl diphosphate, and the N-terminal domain catalyzes the cyclization of geranylgeranyl diphosphate to form fusicoccadiene. Here, crystal structures of each domain complexed with bisphosphonate substrate analogues suggest that three metal ions and three positively charged amino acid side chains trigger substrate ionization in each active site. While in vitro incubations reveal that the cyclase domain can utilize farnesyl diphosphate and geranyl diphosphate as surrogate substrates, these shorter isoprenoid diphosphates are mainly converted into acyclic alcohol or hydrocarbon products. Gel filtration chromatography and analytical ultracentrifugation experiments indicate that full-length fusicoccadiene synthase adopts hexameric quaternary structure, and small-angle X-ray scattering data yield a well-defined molecular envelope illustrating a plausible model for hexamer assembly.},
doi = {10.1021/acschembio.5b00960},
journal = {ACS Chemical Biology},
number = 4,
volume = 11,
place = {United States},
year = {Wed Jan 06 00:00:00 EST 2016},
month = {Wed Jan 06 00:00:00 EST 2016}
}
Web of Science
Works referenced in this record:
The function of terpene natural products in the natural world
journal, June 2007
- Gershenzon, Jonathan; Dudareva, Natalia
- Nature Chemical Biology, Vol. 3, Issue 7
The prenyl transfer reaction. Enzymic and mechanistic studies of the 1'-4 coupling reaction in the terpene biosynthetic pathway
journal, August 1978
- Poulter, C. Dale; Rilling, Hans C.
- Accounts of Chemical Research, Vol. 11, Issue 8
Structural Biology and Chemistry of the Terpenoid Cyclases
journal, August 2006
- Christianson, David W.
- Chemical Reviews, Vol. 106, Issue 8
Unearthing the roots of the terpenome
journal, April 2008
- Christianson, David W.
- Current Opinion in Chemical Biology, Vol. 12, Issue 2
Isoprenoid biosynthesis. Stereochemistry of the cyclization of allylic pyrophosphates
journal, July 1985
- Cane, David E.
- Accounts of Chemical Research, Vol. 18, Issue 7
Enzymic formation of sesquiterpenes
journal, November 1990
- Cane, David E.
- Chemical Reviews, Vol. 90, Issue 7
One pathway, many products
journal, July 2007
- Fischbach, Michael A.; Clardy, Jon
- Nature Chemical Biology, Vol. 3, Issue 7
Fusicoccin: a New Wilting Toxin produced by Fusicoccum amygdali Del.
journal, July 1964
- Ballio, A.; Chain, E. B.; De Leo, P.
- Nature, Vol. 203, Issue 4942
The structure of fusicoccin A
journal, June 1968
- Ballio, A.; Brufani, M.; Casinovi, C. G.
- Experientia, Vol. 24, Issue 6
The constitution of fusicoccin
journal, January 1968
- Barrow, K. D.; Barton, D. H. R.; Chain, E. B.
- Chemical Communications (London), Issue 19
Estimating Yield and Economic Loss from Constriction Canker of Peach
journal, September 2000
- Lalancette, Norman; Polk, Dean F.
- Plant Disease, Vol. 84, Issue 9
Fusicoccin-A selectively induces apoptosis in tumor cells after interferon-α priming
journal, July 2010
- de Vries-van Leeuwen, Ingrid J.; Kortekaas-Thijssen, Chantal; Nzigou Mandouckou, Jean A.
- Cancer Letters, Vol. 293, Issue 2
Fusicoccin signaling reveals 14-3-3 protein function as a novel step in left-right patterning during amphibian embryogenesis
journal, October 2003
- Bunney, Tom D.; De Boer, Albertus H.; Levin, Michael
- Development, Vol. 130, Issue 20
Fusicoccanes: diterpenes with surprising biological functions
journal, June 2012
- de Boer, Albertus H.; Leeuwen, Ingrid J. de Vries-van
- Trends in Plant Science, Vol. 17, Issue 6
Stabilization and Inhibition of Protein–Protein Interactions: The 14-3-3 Case Study
journal, December 2012
- Milroy, Lech-Gustav; Brunsveld, Luc; Ottmann, Christian
- ACS Chemical Biology, Vol. 8, Issue 1
Fusicoccin A, a Phytotoxic Carbotricyclic Diterpene Glucoside of Fungal Origin, Reduces Proliferation and Invasion of Glioblastoma Cells by Targeting Multiple Tyrosine Kinases
journal, April 2013
- Bury, Marina; Andolfi, Anna; Rogister, Bernard
- Translational Oncology, Vol. 6, Issue 2
Fusicoccins are biosynthesized by an unusual chimera diterpene synthase in fungi
journal, February 2007
- Toyomasu, T.; Tsukahara, M.; Kaneko, A.
- Proceedings of the National Academy of Sciences, Vol. 104, Issue 9
Taxadiene synthase structure and evolution of modular architecture in terpene biosynthesis
journal, December 2010
- Köksal, Mustafa; Jin, Yinghua; Coates, Robert M.
- Nature, Vol. 469, Issue 7328
Structure and mechanism of the diterpene cyclase ent-copalyl diphosphate synthase
journal, May 2011
- Köksal, Mustafa; Hu, Huayou; Coates, Robert M.
- Nature Chemical Biology, Vol. 7, Issue 7
Insights into Diterpene Cyclization from Structure of Bifunctional Abietadiene Synthase from Abies grandis
journal, January 2012
- Zhou, Ke; Gao, Yang; Hoy, Julie A.
- Journal of Biological Chemistry, Vol. 287, Issue 9
The first structure of a bacterial diterpene cyclase: CotB2
journal, May 2014
- Janke, Ronja; Görner, Christian; Hirte, Max
- Acta Crystallographica Section D Biological Crystallography, Vol. 70, Issue 6
Structure, function and inhibition of ent-kaurene synthase from Bradyrhizobium japonicum
journal, October 2014
- Liu, Wenting; Feng, Xinxin; Zheng, Yingying
- Scientific Reports, Vol. 4, Issue 1
Diterpene cyclases and the nature of the isoprene fold
journal, April 2010
- Cao, Rong; Zhang, Yonghui; Mann, Francis M.
- Proteins: Structure, Function, and Bioinformatics, Vol. 78, Issue 11
Isoprenyl diphosphate synthases: Protein sequence comparisons, a phylogenetic tree, and predictions of secondary structure
journal, April 1994
- Chen, Anjun; Dale Poulter, C.; Kroon, Paulos A.
- Protein Science, Vol. 3, Issue 4
Trinuclear metal clusters in catalysis by terpenoid synthases
journal, May 2010
- Aaron, Julie A.; Christianson, David W.
- Pure and Applied Chemistry, Vol. 82, Issue 8
Transannular Proton Transfer in the Cyclization of Geranylgeranyl Diphosphate to Fusicoccadiene, a Biosynthetic Intermediate of Fusicoccins
journal, June 2009
- Toyomasu, Tomonobu; Tsukahara, Mai; Kenmoku, Hiromichi
- Organic Letters, Vol. 11, Issue 14
Crystal Structure of Recombinant Farnesyl Diphosphate Synthase at 2.6-.ANG. Resolution
journal, September 1994
- Tarshis, L. C.; Yan, Mujing; Poulter, C. Dale
- Biochemistry, Vol. 33, Issue 36
The Crystal Structure of Human Geranylgeranyl Pyrophosphate Synthase Reveals a Novel Hexameric Arrangement and Inhibitory Product Binding
journal, August 2006
- Kavanagh, Kathryn L.; Dunford, James E.; Bunkoczi, Gabor
- Journal of Biological Chemistry, Vol. 281, Issue 31
Crystal Structure of Type-III Geranylgeranyl Pyrophosphate Synthase from Saccharomyces cerevisiae and the Mechanism of Product Chain Length Determination
journal, March 2006
- Chang, Tao-Hsin; Guo, Rey-Ting; Ko, Tzu-Ping
- Journal of Biological Chemistry, Vol. 281, Issue 21
Structure and Reaction Geometry of Geranylgeranyl Diphosphate Synthase from Sinapis alba † , ‡
journal, December 2006
- Kloer, Daniel P.; Welsch, Ralf; Beyer, Peter
- Biochemistry, Vol. 45, Issue 51
Administration routes and delivery systems of bisphosphonates for the treatment of bone resorption
journal, August 2000
- Ezra, Aviva; Golomb, Gershon
- Advanced Drug Delivery Reviews, Vol. 42, Issue 3
Dali server: conservation mapping in 3D
journal, May 2010
- Holm, Liisa; Rosenstr�m, P�ivi
- Nucleic Acids Research, Vol. 38, Issue suppl_2
X-ray Crystal Structure of Aristolochene Synthase from Aspergillus terreus and Evolution of Templates for the Cyclization of Farnesyl Diphosphate † , ‡
journal, February 2007
- Shishova, Ekaterina Y.; Di Costanzo, Luigi; Cane, David E.
- Biochemistry, Vol. 46, Issue 7
Mechanistic Insights from the Binding of Substrate and Carbocation Intermediate Analogues to Aristolochene Synthase
journal, July 2013
- Chen, Mengbin; Al-lami, Naeemah; Janvier, Marine
- Biochemistry, Vol. 52, Issue 32
Dynamic Allostery: Linkers Are Not Merely Flexible
journal, July 2011
- Ma, Buyong; Tsai, Chung-Jung; Haliloğlu, Türkan
- Structure, Vol. 19, Issue 7
Hedycaryol Synthase in Complex with Nerolidol Reveals Terpene Cyclase Mechanism
journal, January 2014
- Baer, Philipp; Rabe, Patrick; Citron, Christian A.
- ChemBioChem, Vol. 15, Issue 2
Crystal Structure Determination of Aristolochene Synthase from the Blue Cheese Mold, Penicillium roqueforti *
journal, May 2000
- Caruthers, Jonathan M.; Kang, Ilgu; Rynkiewicz, Michael J.
- Journal of Biological Chemistry, Vol. 275, Issue 33
Structural Basis for Bisphosphonate-mediated Inhibition of Isoprenoid Biosynthesis
journal, December 2003
- Hosfield, David J.; Zhang, Yanming; Dougan, Douglas R.
- Journal of Biological Chemistry, Vol. 279, Issue 10
Global Rigid Body Modeling of Macromolecular Complexes against Small-Angle Scattering Data
journal, August 2005
- Petoukhov, Maxim V.; Svergun, Dmitri I.
- Biophysical Journal, Vol. 89, Issue 2
Fusion of farnesyldiphosphate synthase and epi -aristolochene synthase, a sesquiterpene cyclase involved in capsidiol biosynthesis in Nicotiana tabacum : Fusions of FPPS and
journal, July 2002
- Brodelius, Maria; Lundgren, Anneli; Mercke, Per
- European Journal of Biochemistry, Vol. 269, Issue 14
Enzyme clustering accelerates processing of intermediates through metabolic channeling
journal, September 2014
- Castellana, Michele; Wilson, Maxwell Z.; Xu, Yifan
- Nature Biotechnology, Vol. 32, Issue 10
Identification of Ophiobolin F Synthase by a Genome Mining Approach: A Sesterterpene Synthase from Aspergillus clavatus
journal, January 2013
- Chiba, Ryota; Minami, Atsushi; Gomi, Katsuya
- Organic Letters, Vol. 15, Issue 3
Reprogramming the Chemodiversity of Terpenoid Cyclization by Remolding the Active Site Contour of epi -Isozizaene Synthase
journal, February 2014
- Li, Ruiqiong; Chou, Wayne K. W.; Himmelberger, Julie A.
- Biochemistry, Vol. 53, Issue 7
PHENIX: a comprehensive Python-based system for macromolecular structure solution
journal, January 2010
- Adams, Paul D.; Afonine, Pavel V.; Bunkóczi, Gábor
- Acta Crystallographica Section D Biological Crystallography, Vol. 66, Issue 2, p. 213-221
Determination of Domain Structure of Proteins from X-Ray Solution Scattering
journal, June 2001
- Svergun, Dmitri I.; Petoukhov, Maxim V.; Koch, Michel H. J.
- Biophysical Journal, Vol. 80, Issue 6
Works referencing / citing this record:
Chimeric Terpene Synthases Possessing both Terpene Cyclization and Prenyltransfer Activities
journal, April 2018
- Mitsuhashi, Takaaki; Abe, Ikuro
- ChemBioChem, Vol. 19, Issue 11
Production of sesterterpene ophiobolin by a bifunctional terpene synthase in Escherichia coli
journal, September 2019
- Yuan, Wei; Lv, Shuang; Chen, Linyue
- Applied Microbiology and Biotechnology, Vol. 103, Issue 21-22
Protonation-Initiated Cyclization by a Class II Terpene Cyclase Assisted by Tunneling
journal, November 2017
- Eriksson, Adam; Kürten, Charlotte; Syrén, Per-Olof
- ChemBioChem, Vol. 18, Issue 23
Cyclopentane-forming di/sesterterpene synthases: widely distributed enzymes in bacteria, fungi, and plants
journal, January 2018
- Minami, Atsushi; Ozaki, Taro; Liu, Chengwei
- Natural Product Reports, Vol. 35, Issue 12
Theoretical Study of Sesterfisherol Biosynthesis: Computational Prediction of Key Amino Acid Residue in Terpene Synthase
journal, February 2018
- Sato, Hajime; Narita, Koji; Minami, Atsushi
- Scientific Reports, Vol. 8, Issue 1
Unearthing a sesterterpene biosynthetic repertoire in the Brassicaceae through genome mining reveals convergent evolution
journal, July 2017
- Huang, Ancheng C.; Kautsar, Satria A.; Hong, Young J.
- Proceedings of the National Academy of Sciences, Vol. 114, Issue 29
Correction to Structural and Chemical Biology of Terpenoid Cyclases
journal, December 2018
- Christianson, David W.
- Chemical Reviews, Vol. 118, Issue 24
Dynamic Control of ERG20 and ERG9 Expression for Improved Casbene Production in Saccharomyces cerevisiae
journal, November 2018
- Callari, Roberta; Meier, Yvan; Ravasio, Davide
- Frontiers in Bioengineering and Biotechnology, Vol. 6
Opportunities and challenges for the sustainable production of structurally complex diterpenoids in recombinant microbial systems
journal, May 2017
- Kemper, Katarina; Hirte, Max; Reinbold, Markus
- Beilstein Journal of Organic Chemistry, Vol. 13