Temporal Study 2021-2022: Sample-Based Surface Water Chemistry and Organic Matter Characterization across Watersheds in the Yakima River Basin, Washington, USA (v3)

Otenburg, Opal; Barnes, Morgan; Borton, Mikayla A.; Chen, Xingyuan; Chu, Rosalie; Farris, Yuliya; Forbes, Brieanne; Fulton, Stephanie G.; Garayburu-Caruso, Vanessa A.; Goldman, Amy E.; Gonzalez, Brianna I.; Grieger, Samantha; Kaufman, Matthew H.; McKever, Sophia A.; Myers-Pigg, Allison; Pelly, Aaron; Renteria, Lupita; Scheibe, Timothy D.; Son, Kyongho; Torgeson, Joshua M.; Toyoda, Jason G.; Stegen, James C.

doi:10.15485/1898912

Title: Temporal Study 2021-2022: Sample-Based Surface Water Chemistry and Organic Matter Characterization across Watersheds in the Yakima River Basin, Washington, USA (v3)

Dataset
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Abstract

This dataset supports a broader study examining the drivers of temporal variability in sediment respiration rates in the Yakima River Basin. The dataset provides geochemistry and organic matter characterization data generated from samples collected at weekly or bi-weekly intervals at six sites across the Yakima River Basin in Washington, USA. Related sensor data will be published separately and can be used to link sediment respiration rates to biogeochemical processing rates.The data package was originally published in November 2022. It was updated in November 2023 (v2; modified files) and April 2025 (new and modified files). See the change history section in readme for more details. For details on how to navigate data packages generated by this project, see https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About. This dataset is comprised of one main data folder containing (1) file-level metadata; (2) data dictionary; (3) field metadata; (4) dissolved inorganic carbon (DIC), dissolved organic carbon (DOC; reported as non-purgeable organic carbon; NPOC), total nitrogen (TN), total suspended solids (TSS), and ions; (5) averaged values from water chemistry data; (6) surface water sampling protocol; (7) sensor protocol; (8) readme; (9) methods codes; (10) international generic sample number (IGSN) mapping file; and (11) folder of high resolution characterization of organic via 12more »« less

Authors:

Otenburg, Opal;

;

; Farris, Yuliya;

;

; Gonzalez, Brianna I.; Grieger, Samantha;

; McKever, Sophia A.;

;

Pacific Northwest National Laboratory; Pacific Northwest National Laboratory
Pacific Northwest National Laboratory
Colorado State University

Publication Date:: Mon Nov 07 23:00:00 EST 2022

DOE Contract Number:: AC02-05CH11231

Research Org.:: Environmental System Science Data Infrastructure for a Virtual Ecosystem; River Corridor and Watershed Biogeochemistry SFA

Sponsoring Org.:: U.S. DOE > Office of Science > Biological and Environmental Research (BER)

Subject:: 54 ENVIRONMENTAL SCIENCES; Ammonium; Biogeochemistry; Bromide; Calcium; Canopy cover; Chloride; DIC; Dissolved Inorganic Carbon; EARTH SCIENCE > BIOSPHERE > VEGETATION > MACROPHYTES; EARTH SCIENCE > BIOSPHERE > VEGETATION > VEGETATION COVER; EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > SURFACE WATER; EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > WATER QUALITY/WATER CHEMISTRY > NUTRIENTS > NITROGEN; EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > WATER QUALITY/WATER CHEMISTRY > NUTRIENTS > NITROGEN COMPOUNDS; EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > WATER QUALITY/WATER CHEMISTRY > SOLIDS > SUSPENDED SOLIDS; EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > WATER QUALITY/WATER CHEMISTRY > WATER CHARACTERISTICS > NITROGEN COMPOUNDS; EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > WATER QUALITY/WATER CHEMISTRY > WATER CHARACTERISTICS > WATER ION CONCENTRATIONS; ESS-DIVE CSV File Formatting Guidelines Reporting Format; ESS-DIVE File Level Metadata Reporting Format; ESS-DIVE Location Metadata Reporting Format; ESS-DIVE Sample ID and Metadata Reporting Format; ESS-DIVE Water-Soil-Sediment Chemistry Reporting Format; FTICR-MS; Fluoride; Freshwater; Hydrobiogeochemical function; Lithium; Macrophyte cover; Magnesium; Mass spectrometry; Metabolite; Metabolomics; Microbiology; NPOC; Nitrate; Nitrite; Non-purgeable organic carbon; Organic matter; Phosphate; Potassium; River; River corridor; Sodium; Stream; Stream metabolism; Sulfate; TN; TSS; Total Suspended Solids; Total nitrogen; Watershed

OSTI Identifier:: 1898912

DOI:: https://doi.org/10.15485/1898912

Citation Formats


                    Otenburg, Opal, Barnes, Morgan, Borton, Mikayla A., Chen, Xingyuan, Chu, Rosalie, Farris, Yuliya, Forbes, Brieanne, Fulton, Stephanie G., Garayburu-Caruso, Vanessa A., Goldman, Amy E., Gonzalez, Brianna I., Grieger, Samantha, Kaufman, Matthew H., McKever, Sophia A., Myers-Pigg, Allison, Pelly, Aaron, Renteria, Lupita, Scheibe, Timothy D., Son, Kyongho, Torgeson, Joshua M., Toyoda, Jason G., and Stegen, James C. Temporal Study 2021-2022: Sample-Based Surface Water Chemistry and Organic Matter Characterization across Watersheds in the Yakima River Basin, Washington, USA (v3).  United States: N. p., 2022. 
        Web.  doi:10.15485/1898912.

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                    Otenburg, Opal, Barnes, Morgan, Borton, Mikayla A., Chen, Xingyuan, Chu, Rosalie, Farris, Yuliya, Forbes, Brieanne, Fulton, Stephanie G., Garayburu-Caruso, Vanessa A., Goldman, Amy E., Gonzalez, Brianna I., Grieger, Samantha, Kaufman, Matthew H., McKever, Sophia A., Myers-Pigg, Allison, Pelly, Aaron, Renteria, Lupita, Scheibe, Timothy D., Son, Kyongho, Torgeson, Joshua M., Toyoda, Jason G., & Stegen, James C. Temporal Study 2021-2022: Sample-Based Surface Water Chemistry and Organic Matter Characterization across Watersheds in the Yakima River Basin, Washington, USA (v3).  United States.  doi:https://doi.org/10.15485/1898912

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                    Otenburg, Opal, Barnes, Morgan, Borton, Mikayla A., Chen, Xingyuan, Chu, Rosalie, Farris, Yuliya, Forbes, Brieanne, Fulton, Stephanie G., Garayburu-Caruso, Vanessa A., Goldman, Amy E., Gonzalez, Brianna I., Grieger, Samantha, Kaufman, Matthew H., McKever, Sophia A., Myers-Pigg, Allison, Pelly, Aaron, Renteria, Lupita, Scheibe, Timothy D., Son, Kyongho, Torgeson, Joshua M., Toyoda, Jason G., and Stegen, James C. 2022.  
"Temporal Study 2021-2022: Sample-Based Surface Water Chemistry and Organic Matter Characterization across Watersheds in the Yakima River Basin, Washington, USA (v3)".  United States.  doi:https://doi.org/10.15485/1898912.  https://www.osti.gov/servlets/purl/1898912. Pub date:Mon Nov 07 23:00:00 EST 2022

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@article{osti_1898912,

  title        = {Temporal Study 2021-2022: Sample-Based Surface Water Chemistry and Organic Matter Characterization across Watersheds in the Yakima River Basin, Washington, USA (v3)},

  author       = {Otenburg, Opal and Barnes, Morgan and Borton, Mikayla A. and Chen, Xingyuan and Chu, Rosalie and Farris, Yuliya and Forbes, Brieanne and Fulton, Stephanie G. and Garayburu-Caruso, Vanessa A. and Goldman, Amy E. and Gonzalez, Brianna I. and Grieger, Samantha and Kaufman, Matthew H. and McKever, Sophia A. and Myers-Pigg, Allison and Pelly, Aaron and Renteria, Lupita and Scheibe, Timothy D. and Son, Kyongho and Torgeson, Joshua M. and Toyoda, Jason G. and Stegen, James C.},

  abstractNote = {This dataset supports a broader study examining the drivers of temporal variability in sediment respiration rates in the Yakima River Basin. The dataset provides geochemistry and organic matter characterization data generated from samples collected at weekly or bi-weekly intervals at six sites across the Yakima River Basin in Washington, USA. Related sensor data will be published separately and can be used to link sediment respiration rates to biogeochemical processing rates.The data package was originally published in November 2022. It was updated in November 2023 (v2; modified files) and April 2025 (new and modified files). See the change history section in readme for more details. For details on how to navigate data packages generated by this project, see https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About. This dataset is comprised of one main data folder containing (1) file-level metadata; (2) data dictionary; (3) field metadata; (4) dissolved inorganic carbon (DIC), dissolved organic carbon (DOC; reported as non-purgeable organic carbon; NPOC), total nitrogen (TN), total suspended solids (TSS), and ions; (5) averaged values from water chemistry data; (6) surface water sampling protocol; (7) sensor protocol; (8) readme; (9) methods codes; (10) international generic sample number (IGSN) mapping file; and (11) folder of high resolution characterization of organic via 12 Tesla Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS) through the Environmental Molecular Sciences Laboratory (EMSL; https://www.pnnl.gov/environmental-molecular-sciences-laboratory). This folder contains two subfolders, one containing the .xml data files and the other containing instructions for using Formularity (https://omics.pnl.gov/software/formularity) and an R script to process the data based on the user's specific needs. All files are .csv, .pdf, .R, .ref, or .xml.We acknowledge the Yakama Nation as owners and caretakers of the lands where we collected our data. We thank the Confederated Tribes and Bands of the Yakama Nation Tribal Council and Yakama Nation Fisheries for working with us to facilitate sample collection and optimization of data usage according to their values and worldview.},

  doi          = {10.15485/1898912},

  journal      = {},

  number       = ,

  volume       = ,

  place        = {United States},

  year         = {Mon Nov 07 23:00:00 EST 2022},

  month        = {Mon Nov 07 23:00:00 EST 2022}

}

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DOI: https://doi.org/10.15485/1898912

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