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Title: ORNL Compiled Mercury Methylator Database

Abstract

This is a custom reference database compiled by ORNL researchers, containing mercury methylation genes (hgcA and hgcB) from predicted and known mercury methylating microorganisms. The database contains 301 hgcA and 239 hgcB sequences from pure culture and environmental genomes publicly available from the National Center for Biotechnology Information (http://www.ncbi.nlm.nih.gov). The reference packages can be used to assign taxonomic classification to HgcA sequences from cloning, amplicon, or meta-omic datasets.

Authors:
; ; ; ;
Publication Date:
Other Number(s):
MCI533
DOE Contract Number:  
AC05-00OR22725
Product Type:
Dataset
Research Org.:
ORNLCIFSFA (Critical Interfaces Science Focus Area); Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division
Keywords:
HG SFA
OSTI Identifier:
1569274
DOI:
https://doi.org/10.12769/1569274

Citation Formats

Gionfriddo, Caitlin, Podar, Mircea, Gilmour, Cynthia, Pierce, Eric, and Elias, Dwayne. ORNL Compiled Mercury Methylator Database. United States: N. p., 2019. Web. doi:10.12769/1569274.
Gionfriddo, Caitlin, Podar, Mircea, Gilmour, Cynthia, Pierce, Eric, & Elias, Dwayne. ORNL Compiled Mercury Methylator Database. United States. doi:https://doi.org/10.12769/1569274
Gionfriddo, Caitlin, Podar, Mircea, Gilmour, Cynthia, Pierce, Eric, and Elias, Dwayne. 2019. "ORNL Compiled Mercury Methylator Database". United States. doi:https://doi.org/10.12769/1569274. https://www.osti.gov/servlets/purl/1569274. Pub date:Fri Oct 04 00:00:00 EDT 2019
@article{osti_1569274,
title = {ORNL Compiled Mercury Methylator Database},
author = {Gionfriddo, Caitlin and Podar, Mircea and Gilmour, Cynthia and Pierce, Eric and Elias, Dwayne},
abstractNote = {This is a custom reference database compiled by ORNL researchers, containing mercury methylation genes (hgcA and hgcB) from predicted and known mercury methylating microorganisms. The database contains 301 hgcA and 239 hgcB sequences from pure culture and environmental genomes publicly available from the National Center for Biotechnology Information (http://www.ncbi.nlm.nih.gov). The reference packages can be used to assign taxonomic classification to HgcA sequences from cloning, amplicon, or meta-omic datasets.},
doi = {10.12769/1569274},
journal = {},
number = ,
volume = ,
place = {United States},
year = {2019},
month = {10}
}