U.S. Department of EnergyOffice of Scientific and Technical Information
Zegeye 2019 Amplicon data (in EN)
Abstract
We investigated the successional dynamics of a soil microbiome during 21-weeks of enrichment on chitin and its monomer, N-acetylglucosamine. We examined succession of the soil communities in a physically heterogeneous soil matrix as well as a homogeneous liquid medium. We used native marginal soils from Prosser, Washington, as a basis for these studies and this dataset represents amplicon (16S and ITS) analysis of these communities over time during succession.
- Contributors:
Other:
- Pacific Northwest National Lab
- Publication Date:
- Other Number(s):
- Proposal ID: 70880; Instrument ID: 80644; Upload ID: 700
- DOE Contract Number:
- AC05-76RL01830
- Research Org.:
- Pacific Northwest National Lab. (PNNL), Richland, WA (United States). Environmental Molecular Sciences Lab. (EMSL)
- Sponsoring Org.:
- SC-23
- Subject:
- 54 ENVIRONMENTAL SCIENCES; 59 BASIC BIOLOGICAL SCIENCES
- Keywords:
- Chitin; N-acetyl glucosamine; Succession; Microbial Consortia; Soil Microbiome; Model Microbiome; Microbiome Stability; Sequencing; Amplicon sequencing
- OSTI Identifier:
- 1506698
- DOI:
- https://doi.org/10.25584/data.2019-02.700/1506698
Citation Formats
Zegeye, Elias K, Brislawn, Colin Joseph, Farris, Yuliya, Fansler, Sarah J, Hofmockel, Kirsten S, Jansson, Janet K, Wright, Aaron T, Graham, Emily B, Naylor, Dan, McClure, Ryan S, Bernstein, Hans C, and McDermott, Jason. Zegeye 2019 Amplicon data. United States: N. p., 2019.
Web. doi:10.25584/data.2019-02.700/1506698.
Zegeye, Elias K, Brislawn, Colin Joseph, Farris, Yuliya, Fansler, Sarah J, Hofmockel, Kirsten S, Jansson, Janet K, Wright, Aaron T, Graham, Emily B, Naylor, Dan, McClure, Ryan S, Bernstein, Hans C, & McDermott, Jason. Zegeye 2019 Amplicon data. United States. doi:https://doi.org/10.25584/data.2019-02.700/1506698
Zegeye, Elias K, Brislawn, Colin Joseph, Farris, Yuliya, Fansler, Sarah J, Hofmockel, Kirsten S, Jansson, Janet K, Wright, Aaron T, Graham, Emily B, Naylor, Dan, McClure, Ryan S, Bernstein, Hans C, and McDermott, Jason. 2019.
"Zegeye 2019 Amplicon data". United States. doi:https://doi.org/10.25584/data.2019-02.700/1506698. https://www.osti.gov/servlets/purl/1506698. Pub date:Thu Mar 21 00:00:00 EDT 2019
@article{osti_1506698,
title = {Zegeye 2019 Amplicon data},
author = {Zegeye, Elias K and Brislawn, Colin Joseph and Farris, Yuliya and Fansler, Sarah J and Hofmockel, Kirsten S and Jansson, Janet K and Wright, Aaron T and Graham, Emily B and Naylor, Dan and McClure, Ryan S and Bernstein, Hans C and McDermott, Jason},
abstractNote = {We investigated the successional dynamics of a soil microbiome during 21-weeks of enrichment on chitin and its monomer, N-acetylglucosamine. We examined succession of the soil communities in a physically heterogeneous soil matrix as well as a homogeneous liquid medium. We used native marginal soils from Prosser, Washington, as a basis for these studies and this dataset represents amplicon (16S and ITS) analysis of these communities over time during succession.},
doi = {10.25584/data.2019-02.700/1506698},
journal = {},
number = ,
volume = ,
place = {United States},
year = {2019},
month = {3}
}
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Works referenced in this record:
Selection, Succession, and Stabilization of Soil Microbial Consortia
journal, May 2019
- Zegeye, Elias K.; Brislawn, Colin J.; Farris, Yuliya
- mSystems, Vol. 4, Issue 4