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Title: Metagenome and metatranscriptome data for Rifle CMT-03 laboratory microcosm experiment completed in April 2014

Abstract

Sediment samples were collected during installation of monitoring borehole CMT-03. Microcosms were constructed and inoculated under anerobic conditions with these sediments and anaerobic Rifle artificial groundwater. Microcosm metagenomes and metatranscriptomes were sampled every 5 days for a period of 20 days. The dataset gives gene-level annotations, binning, metagenomic and metatranscriptomic coverages for these microcosms.

Authors:
; ; ; ; ; ;
  1. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
Publication Date:
DOE Contract Number:  
AC02-05CH11231
Research Org.:
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23) National Institutes of Health (NIH)
Subject:
54 ENVIRONMENTAL SCIENCES; 58 GEOSCIENCES
OSTI Identifier:
1338826
DOI:
https://doi.org/10.21952/WTR/1338826

Citation Formats

Jewell, Talia, Karaoz, Ulas, Bill, Markus, Chakraborty, Romy, Brodie, Eoin L, Williams, Kenneth Hurst, and Beller, Harry R. Metagenome and metatranscriptome data for Rifle CMT-03 laboratory microcosm experiment completed in April 2014. United States: N. p., 2014. Web. doi:10.21952/WTR/1338826.
Jewell, Talia, Karaoz, Ulas, Bill, Markus, Chakraborty, Romy, Brodie, Eoin L, Williams, Kenneth Hurst, & Beller, Harry R. Metagenome and metatranscriptome data for Rifle CMT-03 laboratory microcosm experiment completed in April 2014. United States. doi:https://doi.org/10.21952/WTR/1338826
Jewell, Talia, Karaoz, Ulas, Bill, Markus, Chakraborty, Romy, Brodie, Eoin L, Williams, Kenneth Hurst, and Beller, Harry R. 2014. "Metagenome and metatranscriptome data for Rifle CMT-03 laboratory microcosm experiment completed in April 2014". United States. doi:https://doi.org/10.21952/WTR/1338826. https://www.osti.gov/servlets/purl/1338826. Pub date:Tue Apr 01 00:00:00 EDT 2014
@article{osti_1338826,
title = {Metagenome and metatranscriptome data for Rifle CMT-03 laboratory microcosm experiment completed in April 2014},
author = {Jewell, Talia and Karaoz, Ulas and Bill, Markus and Chakraborty, Romy and Brodie, Eoin L and Williams, Kenneth Hurst and Beller, Harry R},
abstractNote = {Sediment samples were collected during installation of monitoring borehole CMT-03. Microcosms were constructed and inoculated under anerobic conditions with these sediments and anaerobic Rifle artificial groundwater. Microcosm metagenomes and metatranscriptomes were sampled every 5 days for a period of 20 days. The dataset gives gene-level annotations, binning, metagenomic and metatranscriptomic coverages for these microcosms.},
doi = {10.21952/WTR/1338826},
journal = {},
number = ,
volume = ,
place = {United States},
year = {2014},
month = {4}
}

Works referenced in this record:

Metatranscriptomic Analysis Reveals Unexpectedly Diverse Microbial Metabolism in a Biogeochemical Hot Spot in an Alluvial Aquifer
journal, January 2017


    Works referencing / citing this record:

    Metatranscriptomic Analysis Reveals Unexpectedly Diverse Microbial Metabolism in a Biogeochemical Hot Spot in an Alluvial Aquifer
    journal, January 2017