Prime VI
- Sandia National Lab. (SNL-CA), Livermore, CA (United States); Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Sandia National Laboratories (SNL), Albuquerque, NM, and Livermore, CA (United States)
SAND2025-03757O Prime VI is a distribution-of-disease outbreak model calibration code based on variational inference. It accompanies a publication for submission to Statistics in Medicine journal, and the code will be maintained for open-source use on Sandia's GitLab. The software provides methods for calibrating an epidemiological model to measured case-count data for a multitude of correlated spatial regions. The code solves a Bayesian inverse problem for model calibration where the posterior over-model parameters are approximated through a custom implementation of variational inference. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525.
- Site Accession Number:
- SCR #3072.0
- Software Type:
- Scientific
- License(s):
- BSD 2-clause "Simplified" License
- Programming Language(s):
- Python 3.11.5
- Research Organization:
- Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States)
- Sponsoring Organization:
- USDOEPrimary Award/Contract Number:NA0003525
- DOE Contract Number:
- NA0003525
- Code ID:
- 162810
- OSTI ID:
- code-162810
- Country of Origin:
- United States
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