Integrating Ontological Knowledge and Textual Evidence in Estimating Gene and Gene Product Similarity
Conference
·
OSTI ID:908204
With the rising influence of the Gene On-tology, new approaches have emerged where the similarity between genes or gene products is obtained by comparing Gene Ontology code annotations associ-ated with them. So far, these approaches have solely relied on the knowledge en-coded in the Gene Ontology and the gene annotations associated with the Gene On-tology database. The goal of this paper is to demonstrate that improvements to these approaches can be obtained by integrating textual evidence extracted from relevant biomedical literature.
- Research Organization:
- Pacific Northwest National Laboratory (PNNL), Richland, WA (US)
- Sponsoring Organization:
- USDOE
- DOE Contract Number:
- AC05-76RL01830
- OSTI ID:
- 908204
- Report Number(s):
- PNNL-SA-54090
- Country of Publication:
- United States
- Language:
- English
Similar Records
Combining Hierarchical and Associative Gene Ontology Relations with Textual Evidence in Estimating Gene and Gene Product Similarity
Aligning ontologies and integrating textual evidence for pathway analysis of microarray data
Cross-Ontological Analytics: Combining Associative and Hierarchical Relations in the Gene Ontologies to Assess Gene Product Similarity
Journal Article
·
Wed Feb 28 23:00:00 EST 2007
· IEEE Transactions on NanoBioscience, 6(1):51-59
·
OSTI ID:902678
Aligning ontologies and integrating textual evidence for pathway analysis of microarray data
Technical Report
·
Sun Oct 08 00:00:00 EDT 2006
·
OSTI ID:948766
Cross-Ontological Analytics: Combining Associative and Hierarchical Relations in the Gene Ontologies to Assess Gene Product Similarity
Conference
·
Sun May 28 00:00:00 EDT 2006
·
OSTI ID:889067