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The definition of reaction coordinates for reaction-path dynamics

Journal Article · · Journal of Chemical Physics; (USA)
DOI:https://doi.org/10.1063/1.460123· OSTI ID:5556575
 [1];  [2]; ; ;  [3]
  1. Computer Sciences Corporation, Seabrook, Maryland 20706 (USA)
  2. Molecular Science Research Center, Pacific Northwest Laboratory, Richland, Washington 99352 (USA)
  3. Department of Chemistry and Supercomputer Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431 (USA)

We present equations for generalized-normal-mode vibrational frequencies in reaction-path calculations based on various sets of coordinates for describing the internal motions of the system in the vicinity of a reaction path. We consider two special cases in detail as examples, in particular three-dimensional atom--diatom collisions with collinear steepest descent paths and reactions of the form CX{sub 3}+{ital YZ}{r arrow}CX{sub 3} {ital Y}+{ital Z} with reaction paths having {ital C}{sub 3{ital v}} symmetry. We then present numerical comparisons of the differences in harmonic reaction-path frequencies for various coordinate choices for three such systems, namely, H+H{sub 2}{r arrow}H{sub 2}+H, O+H{sub 2}{r arrow}OH+H, and CH{sub 3}+H{sub 2}{r arrow}CH{sub 4}+H. We test the importance of the differences in the harmonic frequencies for dynamics calculations by using them to compute thermal rate constants using variational transition state theory with semiclassical ground-state tunneling corrections. We present a new coordinate system for the reaction CH{sub 3}+H{sub 2} that should allow for more accurate calculations than the Cartesian system used for previous reaction-path calculations on this and other polyatomic systems.

DOE Contract Number:
AC06-76RL01830
OSTI ID:
5556575
Journal Information:
Journal of Chemical Physics; (USA), Journal Name: Journal of Chemical Physics; (USA) Vol. 94:12; ISSN JCPSA; ISSN 0021-9606
Country of Publication:
United States
Language:
English