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Stationary solutions of the master equation for single and multi-intermediate autocatalytic chemical systems

Journal Article · · Journal of Chemical Physics; (United States)
DOI:https://doi.org/10.1063/1.462446· OSTI ID:5524123
;  [1]; ;  [2]
  1. Department of Chemistry, Stanford University, Stanford, California 94305 (United States)
  2. Department of Chemistry, Michigan State University, East Lansing, Michigan 48824 (United States)
In this work, we test a hypothesized form for the stationary solution {ital P}{sub {ital s}}({ital X},{ital Y}) of the stochastic master equation for a reacting chemical system with two reactive intermediates {ital X} and {ital Y}, and multiple steady states. Thermodynamic analyses and the exact results for nonautocatalytic or equilibrating systems suggest an approximation of the form {ital P}{sup {ital a}}{sub {ital s}}({ital X},{ital Y})=N exp({minus}{phi}/{ital kT}), where the function {phi} is a line integral of a differential excess'' work F{phi}, which depends on species-specific affinities. The differential F{phi} is inexact. In a preceding paper, we have given an analytic argument for the use of the deterministic kinetic trajectory, connecting ({ital X},{ital Y}) to the steady state ({ital X}{sup {ital s}},{ital Y}{sup {ital s}}) as the path of integration for F{phi}. Here, we show that use of the deterministic trajectories leads to a potential {phi}{sub det} which is continuous across the separatrix between the domains of attraction of the two stable steady states in the model studied.
OSTI ID:
5524123
Journal Information:
Journal of Chemical Physics; (United States), Journal Name: Journal of Chemical Physics; (United States) Vol. 96:1; ISSN JCPSA; ISSN 0021-9606
Country of Publication:
United States
Language:
English