Data from: Genome-wide association and genomic prediction for biomass yield in Miscanthus sinensis phenotyped in Asia and North America

Dataset · Sat Dec 31 19:00:00 EST 2016

DOI:https://doi.org/10.13012/B2IDB-0790815_V1· OSTI ID:3009856

Clark, Lindsay V. ^[1]; Dwiyanti, Maria S.; Anzoua, Kossonou G.; Brummer, Joe E.; Głowacka, Katarzyna ^[1]; Hall, Megan; Heo, Kweon; Jin, Xiaoli; Lipka, Alexander E. ^[1]; Peng, Junhua; Yamada, Toshihiko; Yoo, Ji Hye; Yu, Chang Yeon; Zhao, Hua; Long, Stephen P. ^[1]; Sacks, Erik J. ^[1]

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1. University of Illinois

This dataset contains genotypic and phenotypic data, R scripts, and the results of analysis pertaining to a multi-location field trial of Miscanthus sinensis. Genome-wide association and genomic prediction were performed for biomass yield and 14 yield-component traits across six field trial locations in Asia and North America, using 46,177 single-nucleotide polymorphism (SNP) markers mined from restriction site-associated DNA sequencing (RAD-seq) and 568 M. sinensis accessions. Genomic regions and candidate genes were identified that can be used for breeding improved varieties of M. sinensis, which in turn will be used to generate new M. xgiganteus clones for biomass.

• Research Organization: University of Illinois at Urbana-Champaign
• Sponsoring Organization: U.S. Department of Energy (DOE)
• DOE Contract Number: SC0006634
• OSTI ID: 3009856
• Country of Publication: United States
• Language: English

Related Subjects

genome-wide association studies (GWAS)
genomic selection
genotyping-by-sequencing (GBS)
miscanthus