Population genomics identify the requirement of BAP2 in the sufficiency of IRE1 in the UPR
- GLBRC - Michigan State University
Sequencing reads archived here are part of a project studying natural variation in ER stress responses in Arabidopsis reported in Pastor-Cantizano et al. 2024. The project focused on contrasting alleles derived from Na-1 (tolerant) and Est-0 (susceptible) accessions when exposed to a ER stress inducer. These accession were crossed, F3 progeny were phenotyped, and the top and bottom 10% of relative performance under ER stress (42 individuals from each tail) were pooled and sequenced. Candidate genomic regions were identified by looking for allele frequency differences among the two pools in a standard QTL-seq approach
- Research Organization:
- Great Lakes Bioenergy Research Center (GLBRC), Madison, WI (United States)
- Sponsoring Organization:
- USDOE Office of Science (SC), Biological and Environmental Research (BER)
- DOE Contract Number:
- SC0018409
- OSTI ID:
- 3003594
- Country of Publication:
- United States
- Language:
- English
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