Complete genome sequence of Sphingobium yanoikuyae strain CC4533
- School of Field Investigations and Experimental Sciences, University of West Georgia, Carrollton, GA, USA
- School of Computing, Analytics, and Modeling, University of West Georgia, Carrollton, GA, USA
We have isolated a new strain of Sphingobium yanoikuyae, which belongs to the class Alphaproteobacteria, order Sphingomonadales, and family Sphingomonadaceae. This carotenoid-producing strain is capable of degrading xenobiotics and is tolerant to toxic levels of six heavy metals. We have designated the newly isolated strain of S. yanoikuyae as S. yanoikuyae strain CC4533 (hereafter called strain CC4533) because it was isolated from a contaminated Tris-Acetate-Phosphate (TAP) medium culture plate of a green micro-alga Chlamydomonas reinhardtii wild type strain CC4533. We sequenced the whole genome of strain CC4533 using the PacBio Sequel II Continuous Long Read technology and have submitted it to NCBI along with the SRA and PacBio methylation motif data. Additionally, we have submitted the PacBio methylome to REBASE, Ref#35996. We present the whole genome sequence of S. yanoikuyae strain CC4533 that offers insights into its coding and non-coding genes and its nearest taxonomic neighbors.
- Research Organization:
- U.S. Department of Energy Systems Biology Knowledgebase (KBASE)
- Sponsoring Organization:
- USDOE Office of Science (SC), Biological and Environmental Research (BER)
- DOE Contract Number:
- AC02-05CH11231; AC02-06CH11357; AC05-00OR22725; AC02-98CH10886
- OSTI ID:
- 2997510
- Country of Publication:
- United States
- Language:
- English
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