skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Coupled Biotic-Abiotic Processes Control Biogeochemical Cycling of Dissolved Organic Matter in the Columbia River Hyporheic Zone

Journal Article · · Frontiers in Water

A critical component of assessing the impacts of climate change on watershed ecosystems involves understanding the role that dissolved organic matter (DOM) plays in driving whole ecosystem metabolism. The hyporheic zone—a biogeochemical control point where ground water and river water mix—is characterized by high DOM turnover and microbial activity and is responsible for a large fraction of lotic respiration. Yet, the dynamic nature of this ecotone provides a challenging but important environment to parse out different DOM influences on watershed function and net carbon and nutrient fluxes. We used high-resolution Fourier-transform ion cyclotron resonance mass spectrometry to provide a detailed molecular characterization of DOM and its transformation pathways in the Columbia river watershed. Samples were collected from ground water (adjacent unconfined aquifer underlying the Hanford 300 Area), Columbia river water, and its hyporheic zone. The hyporheic zone was sampled at five locations to capture spatial heterogeneity within the hyporheic zone. Our results revealed that abiotic transformation pathways (e.g., carboxylation), potentially driven by abiotic factors such as sunlight, in both the ground water and river water are likely influencing DOM availability to the hyporheic zone, which could then be coupled with biotic processes for enhanced microbial activity. The ground water profile revealed high rates of N and S transformations via abiotic reactions. The river profile showed enhanced abiotic photodegradation of lignin-like molecules that subsequently entered the hyporheic zone as low molecular weight, more degraded compounds. While the compounds in river water were in part bio-unavailable, some were further shown to increase rates of microbial respiration. Together, river water and ground water enhance microbial activity within the hyporheic zone, regardless of river stage, as shown by elevated putative amino-acid transformations and the abundance of amino-sugar and protein-like compounds. This enhanced microbial activity is further dependent on the composition of ground water and river water inputs. Our results further suggest that abiotic controls on DOM should be incorporated into predictive modeling for understanding watershed dynamics, especially as climate variability and land use could affect light exposure and changes to ground water essential elements, both shown to impact the Columbia river hyporheic zone.

Research Organization:
Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)
Sponsoring Organization:
USDOE
Grant/Contract Number:
AC05-76RL01830
OSTI ID:
2325285
Alternate ID(s):
OSTI ID: 1777984
Report Number(s):
PNNL-SA-158822; 574692
Journal Information:
Frontiers in Water, Journal Name: Frontiers in Water Vol. 2; ISSN 2624-9375
Publisher:
Frontiers Media SACopyright Statement
Country of Publication:
Switzerland
Language:
English

References (76)

Subsurface biogeochemistry is a missing link between ecology and hydrology in dam-impacted river corridors journal March 2019
Stratification of reactivity determines nitrate removal in groundwater journal January 2019
Experimental Evidence for Abiotic Sulfurization of Marine Dissolved Organic Matter journal November 2017
Seasonal variation in surface-subsurface water exchange and lateral hyporheic area of two stream-aquifer systems journal March 1998
Influence of hyporheic zone characteristics on the structure and activity of microbial assemblages journal September 2013
Effects of Watershed History on Dissolved Organic Matter Characteristics in Headwater Streams journal August 2011
Photochemical reactivity of dissolved lignin in river and ocean waters journal September 1998
Coupling Spatiotemporal Community Assembly Processes to Changes in Microbial Metabolism journal December 2016
Photochemical degradation of dissolved organic matter and dissolved lignin phenols from the Congo River journal January 2009
Controls on Dissolved Organic Carbon Bioreactivity in River Systems journal October 2019
Photochemical alteration of organic carbon draining permafrost soils shifts microbial metabolic pathways and stimulates respiration journal October 2017
Iron-oxidizer hotspots formed by intermittent oxic–anoxic fluid mixing in fractured rocks journal January 2020
The Effect of Stream Discharge on Hyporheic Exchange journal July 2019
Discerning Microbially Mediated Processes During Redox Transitions in Flooded Soils Using Carbon and Energy Balances journal May 2018
Dynamics of wet‐season turbidity in relation to precipitation, discharge, and land cover in three urbanizing watersheds, Oregon journal May 2019
Expanding the role of reactive transport models in critical zone processes journal February 2017
Aggregate-associated soil organic matter as an ecosystem property and a measurement tool journal January 2014
Riparian Ecology and Management in the Pacific Coastal Rain Forest journal January 2000
Hyporheic hot moments: Dissolved oxygen dynamics in the hyporheic zone in response to surface flow perturbations: DISSOLVED OXYGEN DYNAMICS IN THE HYPORHEIC ZONE journal August 2017
Palmitoylation of Intracellular Signaling Proteins: Regulation and Function journal June 2004
“compositions”: A unified R package to analyze compositional data journal April 2008
Control Points in Ecosystems: Moving Beyond the Hot Spot Hot Moment Concept journal January 2017
The impact of climate change on the treatability of dissolved organic matter (DOM) in upland water supplies: A UK perspective journal March 2014
In-stream geomorphic structures as drivers of hyporheic exchange: IN-STREAM STRUCTURES AND HYPORHEIC EXCHANGE journal March 2008
Contribution of the Hyporheic Zone to Ecosystem Metabolism in a Prealpine Gravel-Bed-River journal December 1997
A generalized Damköhler number for classifying material processing in hydrological systems journal January 2013
Unexpected spatial stability of water chemistry in headwater stream networks journal December 2017
Terrestrial and marine perspectives on modeling organic matter degradation pathways journal July 2015
Coupling effects of abiotic and biotic factors on molecular composition of dissolved organic matter in a freshwater wetland journal February 2016
Photodegradation disproportionately impacts biodegradation of semi‐labile DOM in streams journal July 2019
Hydrology controls dissolved organic matter export and composition in an Alpine stream and its hyporheic zone: Hydrology controls stream and hyporheic DOM journal December 2015
Riverine DOM book October 2014
Large Stimulation of Recalcitrant Dissolved Organic Carbon Degradation by Increasing Ocean Temperatures journal January 2018
Geomorphic controls on hyporheic exchange flow in mountain streams: GEOMORPHIC CONTROLS ON HYPORHEIC EXCHANGE journal January 2003
Modeling the influence of organic acids on soil weathering journal August 2014
Ab initio prediction of metabolic networks using Fourier transform mass spectrometry data journal July 2006
Evidence of Incorporation of Abiotic S and N into Prairie Wetland Dissolved Organic Matter journal August 2014
Coupling a three-dimensional subsurface flow and transport model with a land surface model to simulate stream–aquifer–land interactions (CP v1.0) journal January 2017
A physical explanation for the development of redox microzones in hyporheic flow journal June 2015
Ecology and management of the hyporheic zone: stream–groundwater interactions of running waters and their floodplains journal March 2010
Interactions between groundwater and surface water: the state of the science journal January 2002
ORCHILEAK (revision 3875): a new model branch to simulate carbon transfers along the terrestrial–aquatic continuum of the Amazon basin journal January 2017
Uptake of nutrients and organic C in streams in New York City drinking-water-supply watersheds journal December 2006
Bacterial responses in activity and community composition to photo-oxidation of dissolved organic matter from soil and surface waters journal February 2007
Hyporheic flow and transport processes: Mechanisms, models, and biogeochemical implications: HYPORHEIC FLOW AND TRANSPORT PROCESSES journal October 2014
Kendrick Mass Defect Spectrum:  A Compact Visual Analysis for Ultrahigh-Resolution Broadband Mass Spectra journal October 2001
Reactivity continuum of dissolved organic carbon decomposition in lake water: REACTIVITY CONTINUUM OF LAKE DOC journal February 2012
Graphical Method for Analysis of Ultrahigh-Resolution Broadband Mass Spectra of Natural Organic Matter, the Van Krevelen Diagram journal October 2003
The river as a chemostat: fresh perspectives on dissolved organic matter flowing down the river continuum journal August 2015
Sequential extraction protocol for organic matter from soils and sediments using high resolution mass spectrometry journal June 2017
Current developments in soil organic matter modeling and the expansion of model applications: a review journal December 2015
Cryptic carbon and sulfur cycling between surface ocean plankton journal December 2014
What happens to terrestrial organic matter in the ocean? journal November 1997
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks journal November 2003
The effect of land use on dissolved organic carbon and nitrogen uptake in streams journal November 2009
A Review of the Hyporheic Zone, Stream Restoration, and Means to Enhance Denitrification journal September 2014
Toward measuring biogeochemistry within the stream-groundwater interface at the network scale: An initial assessment of two spatial sampling strategies: Network scale stream-groundwater biogeochemistry journal September 2018
Colonization Habitat Controls Biomass, Composition, and Metabolic Activity of Attached Microbial Communities in the Columbia River Hyporheic Corridor journal June 2017
Impact of dam operations on hyporheic exchange in the riparian zone of a regulated river journal July 2009
MetaNetter 2: A Cytoscape plugin for ab initio network analysis and metabolite feature classification journal December 2017
Elevated [CO2] changes soil organic matter composition and substrate diversity in an arid ecosystem journal November 2018
The Functional Significance of the Hyporheic zone in Streams and Rivers journal November 1998
Using network analysis to discern compositional patterns in ultrahigh-resolution mass spectrometry data of dissolved organic matter: Network analysis and mass spectrometry journal September 2016
Biogeochemistry of Wetlands book July 2008
Identifying the sources of nitrate contamination of groundwater in an agricultural area (Haean basin, Korea) using isotope and microbial community analyses journal November 2015
Exoenzyme activities as indicators of dissolved organic matter composition in the hyporheic zone of a floodplain river: Exoenzyme activities and hyporheic DOM journal June 2010
Geochemical and Microbial Community Attributes in Relation to Hyporheic Zone Geological Facies journal September 2017
Functional and Structural Responses of Hyporheic Biofilms to Varying Sources of Dissolved Organic Matter journal July 2014
Complete and Partial Photo-oxidation of Dissolved Organic Matter Draining Permafrost Soils journal March 2016
Groundwater–surface water mixing shifts ecological assembly processes and stimulates organic carbon turnover journal April 2016
New Insights into the Mechanisms of Protein Palmitoylation journal March 2003
Long term variation in water colour from Yorkshire catchments journal October 2001
Revealing biogeochemical signatures of Arctic landscapes with river chemistry journal September 2019
Carbon Leakage through the Terrestrial-aquatic Interface: Implications for the Anthropogenic CO2 Budget journal January 2014
Scaling of dissolved organic carbon removal in river networks journal December 2017
Influences of organic carbon speciation on hyporheic corridor biogeochemistry and microbial ecology journal February 2018