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An Ab Initio-Derived Force Field for Amorphous Silica Interfaces for Use in Molecular Dynamics Simulations

Journal Article · · Journal of Physical Chemistry. C

Here, we present a classical interatomic force field, silica-DDEC, to describe the interactions of amorphous and crystalline silica surfaces, parametrized using density functional theory-based charges. Charge schemes for silica surfaces were developed using the density-derived electrostatic and chemical (DDEC) method, which reproduces atomic charges of the periodic models as well as the electrostatic potential away from the atom sites. Lennard–Jones parameters were determined by requiring the correct description of (i) the amorphous silica density, coordination defects, and local coordination geometry, relative to experimental measurements, and (ii) water-silica interatomic distances compared with ab initio results. Deprotonated surface silanol sites are also described within the model based on DDEC charges. The result is a general electronic structure-derived model for describing fully flexible amorphous and crystalline silica surfaces and interactions of liquids with silica surfaces of varying structure and protonation state.

Research Organization:
Sandia National Laboratories (SNL-NM), Albuquerque, NM (United States); Univ. of Kansas, Lawrence, KS (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES). Chemical Sciences, Geosciences & Biosciences Division (CSGB); National Science Foundation (NSF)
Grant/Contract Number:
NA0003525; SC0019488
OSTI ID:
2317746
Report Number(s):
SAND--2024-02276J
Journal Information:
Journal of Physical Chemistry. C, Journal Name: Journal of Physical Chemistry. C Journal Issue: 33 Vol. 127; ISSN 1932-7447
Publisher:
American Chemical SocietyCopyright Statement
Country of Publication:
United States
Language:
English

References (81)

Exceptional Negative Thermal Expansion in Isoreticular Metal–Organic Frameworks journal June 2007
Ab initio derived force-field parameters for molecular dynamics simulations of deprotonated amorphous-SiO 2 /water interfaces: Force field for amorphous-SiO 2 /water interfaces journal December 2011
The thermodynamics of the aqueous carbon dioxide fluid within thin pores journal October 1989
Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes journal March 1977
Planar rings in vitreous silica journal May 1982
Planar rings in glasses journal November 1982
VMD: Visual molecular dynamics journal February 1996
Efficiency of ab-initio total energy calculations for metals and semiconductors using a plane-wave basis set journal July 1996
Effects of temperature on silicate melt sructure: A high temperature 29Si NMR study of Na2Si2O5 journal July 1997
Nanogeochemistry: Nanostructures, emergent properties and their control on geochemical reactions and mass transfers journal June 2014
Selecting reliable interatomic potentials for classical molecular dynamics simulations of glasses: The case of amorphous SiO2 journal February 2017
LAMMPS - a flexible simulation tool for particle-based materials modeling at the atomic, meso, and continuum scales journal February 2022
Molecular dynamics simulations of vitreous silica structures journal October 2004
Mechanical properties of silica glass predicted by a pair-wise potential in molecular dynamics simulations journal August 2016
Real-Time Dynamics of Single-DNA Molecules Undergoing Adsorption and Desorption at Liquid−Solid Interfaces journal February 2001
A Transferable Force Field for Predicting Adsorption and Diffusion of Hydrocarbons and Small Molecules in Silica Zeolites with Coupled-Cluster Accuracy journal April 2021
Amorphous Silica Slab Models with Variable Surface Roughness and Silanol Density for Use in Simulations of Dynamics and Catalysis journal October 2021
Computer Simulations of Quartz (101)–Water Interface over a Range of pH Values journal April 2015
Bimodal Acidity at the Amorphous Silica/Water Interface journal November 2015
Ab Initio Derived Force Fields for Predicting CO 2 Adsorption and Accessibility of Metal Sites in the Metal–Organic Frameworks M-MOF-74 (M = Mn, Co, Ni, Cu) journal June 2015
ReaxFF Molecular Dynamics Simulations of Hydroxylation Kinetics for Amorphous and Nano-Silica Structure, and Its Relations with Atomic Strain Energy journal December 2015
Understanding the Acidic Properties of the Amorphous Hydroxylated Silica Surface journal June 2019
p K a at Quartz/Electrolyte Interfaces journal August 2016
Increased Acid Dissociation at the Quartz/Water Interface journal April 2018
New Force-Field for Organosilicon Molecules in the Liquid Phase journal August 2021
Force Field and a Surface Model Database for Silica to Simulate Interfacial Properties in Atomic Resolution journal April 2014
FFSiOH: a New Force Field for Silica Polymorphs and Their Hydroxylated Surfaces Based on Periodic B3LYP Calculations journal March 2008
Chemically Meaningful Atomic Charges That Reproduce the Electrostatic Potential in Periodic and Nonperiodic Materials journal July 2010
The Dissociated Amorphous Silica Surface: Model Development and Evaluation journal October 2010
The Silica–Water Interface: How the Silanols Determine the Surface Acidity and Modulate the Water Properties journal February 2012
Improved Atoms-in-Molecule Charge Partitioning Functional for Simultaneously Reproducing the Electrostatic Potential and Chemical States in Periodic and Nonperiodic Materials journal July 2012
Surfactant-Templated Mesoporous Silicate Materials as Sorbents for Organic Pollutants in Water journal October 2000
Molecular Mechanics Potential for Silica and Zeolite Catalysts Based on ab Initio Calculations. 2. Aluminosilicates journal June 1995
Molecular mechanics potential for silica and zeolite catalysts based on ab initio calculations. 1. Dense and microporous silica journal January 1994
The missing term in effective pair potentials journal November 1987
Spectroscopic studies of pyrene at silica interfaces journal May 1990
Elucidating the Bimodal Acid−Base Behavior of the Water−Silica Interface from First Principles journal December 2009
ReaxFF SiO Reactive Force Field for Silicon and Silicon Oxide Systems journal May 2003
Molecular Models of Hydroxide, Oxyhydroxide, and Clay Phases and the Development of a General Force Field journal January 2004
Model for the Water−Amorphous Silica Interface:  The Undissociated Surface journal September 2007
Water−Silica Force Field for Simulating Nanodevices journal November 2006
Dissociative Chemisorption of Water onto Silica Surfaces and Formation of Hydronium Ions journal February 2008
Prediction of CO 2 Adsorption Properties in Zeolites Using Force Fields Derived from Periodic Dispersion-Corrected DFT Calculations journal May 2012
Oxygen Interactions with Silica Surfaces: Coupled Cluster and Density Functional Investigation and the Development of a New ReaxFF Potential journal December 2012
On the Diffusion of Acetonitrile in Nanoscale Amorphous Silica Pores. Understanding Anisotropy and the Effects of Hydrogen Bonding journal September 2013
Proton Dynamics at the Water–Silica Interface via Dissociative Molecular Dynamics journal December 2014
Molecular Dynamics of Ionic Transport and Electrokinetic Effects in Realistic Silica Channels journal June 2008
Simulations of Infrared Spectra of Nanoconfined Liquids: Acetonitrile Confined in Nanoscale, Hydrophilic Silica Pores journal March 2009
Hierarchical Multiscale Simulation of Electrokinetic Transport in Silica Nanochannels at the Point of Zero Charge journal October 2006
Testing a Two-State Model of Nanoconfined Liquids:  Conformational Equilibrium of Ethylene Glycol in Amorphous Silica Pores journal December 2006
Investigating the Quartz (101̅0)/Water Interface using Classical and Ab Initio Molecular Dynamics journal July 2011
Chemical Effects on Subcritical Fracture in Silica From Molecular Dynamics Simulations journal November 2018
Introducing DDEC6 atomic population analysis: part 4. Efficient parallel computation of net atomic charges, atomic spin moments, bond orders, and more journal January 2018
Structure and dynamics of amorphous silica surfaces journal May 2001
An ab initio parametrized interatomic force field for silica journal November 2002
A general purpose model for the condensed phases of water: TIP4P/2005 journal December 2005
Molecular dynamics with coupling to an external bath journal October 1984
A structural analysis of the vitreous silica surface via a molecular dynamics computer simulation journal March 1987
Properties of liquid acetone in silica pores: Molecular dynamics simulation journal April 1996
Simulations of the infrared, Raman, and 2D-IR photon echo spectra of water in nanoscale silica pores journal May 2016
New optimization scheme to obtain interaction potentials for oxide glasses journal May 2018
Simulations of the IR and Raman spectra of water confined in amorphous silica slit pores journal March 2021
The nature of the Si-O-Si bond angle distribution in vitreous silica journal April 1985
A refinement of the structure of vitreous silica journal March 1975
Oxide/water interfaces: how the surface chemistry modifies interfacial water properties journal March 2012
The amorphous silica–liquid water interface studied by ab initio molecular dynamics (AIMD): local organization in global disorder journal May 2014
Networks under pressure: the development of in situ high-pressure neutron diffraction for glassy and liquid materials journal March 2015
First-principles study of the surface of silica and sodium silicate glasses journal May 2021
Interaction potential for SiO 2 : A molecular-dynamics study of structural correlations journal June 1990
Ab initiomolecular dynamics for liquid metals journal January 1993
Efficient iterative schemes for ab initio total-energy calculations using a plane-wave basis set journal October 1996
Cooling-rate effects in amorphous silica: A computer-simulation study journal December 1996
Structural and topological changes in silica glass at pressure journal February 2010
High-Pressure Transformation of SiO 2 Glass from a Tetrahedral to an Octahedral Network: A Joint Approach Using Neutron Diffraction and Molecular Dynamics journal September 2014
Force fields for silicas and aluminophosphates based on ab initio calculations journal April 1990
The structure of vitreous silica journal October 1969
New fitting scheme to obtain effective potential from Car-Parrinello molecular-dynamics simulations: Application to silica journal March 2008
Model silica pores with controllable surface chemistry for molecular dynamics simulatinos journal January 2005
The cristobalite structures journal April 1932
Study of the Microstructure of Amorphous Silica Nanostructures Using High-Resolution Electron Microscopy, Electron Energy Loss Spectroscopy, X-ray Powder Diffraction, and Electron Pair Distribution Function journal October 2020
Mineralogy, Geochemistry and Genesis of Agate—A Review journal November 2020

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