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Title: New methods for indexing multi-lattice diffraction data

Journal Article · · Acta Crystallographica. Section D: Biological Crystallography
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  1. Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE (United Kingdom)
  2. STFC Rutherford Appleton Laboratory, Didcot OX11 0QX (United Kingdom)
  3. University of Oxford, Oxford OX3 7BN (United Kingdom)
  4. Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States)

A new indexing method is presented which is capable of indexing multiple crystal lattices from narrow wedges of data. The efficacy of this method is demonstrated with both semi-synthetic multi-lattice data and real multi-lattice data recorded from microcrystals of ∼1 µm in size. A new indexing method is presented which is capable of indexing multiple crystal lattices from narrow wedges of diffraction data. The method takes advantage of a simplification of Fourier transform-based methods that is applicable when the unit-cell dimensions are known a priori. The efficacy of this method is demonstrated with both semi-synthetic multi-lattice data and real multi-lattice data recorded from crystals of ∼1 µm in size, where it is shown that up to six lattices can be successfully indexed and subsequently integrated from a 1° wedge of data. Analysis is presented which shows that improvements in data-quality indicators can be obtained through accurate identification and rejection of overlapping reflections prior to scaling.

OSTI ID:
22347757
Journal Information:
Acta Crystallographica. Section D: Biological Crystallography, Vol. 70, Issue Pt 10; Other Information: PMCID: PMC4188007; PMID: 25286849; PUBLISHER-ID: kw5106; OAI: oai:pubmedcentral.nih.gov:4188007; Copyright (c) Gildea et al. 2014; This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.; Country of input: International Atomic Energy Agency (IAEA); ISSN 0907-4449
Country of Publication:
Denmark
Language:
English

References (1)

Semisynthetic Multi-Lattice Diffraction Data dataset January 2014

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Structure and function of the type III pullulan hydrolase from Thermococcus kodakarensis journal April 2018
Electron diffraction data processing with DIALS journal May 2018
Crystal structure of a peptidyl-dipeptidase K-26-DCP from Actinomycete in complex with its natural inhibitor journal November 2016
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Rapid Sample Delivery for Megahertz Serial Crystallography at X-ray FELs text January 2018
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Rapid sample delivery for megahertz serial crystallography at X-ray FELs text January 2018
Climbing the Data Mountain: Processing of SFX Data text January 2018
XGANDALF – extended gradient descent algorithm for lattice finding text January 2019
The structure of the tetanus toxin reveals pH-mediated domain dynamics journal December 2018

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