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Editorial special issue: Advancing foundational sun-induced chlorophyll fluorescence science

Journal Article · · Agricultural and Forest Meteorology
 [1];  [2];  [3];  [4]
  1. European Commission, Ispra (Italy). Joint Research Centre
  2. Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
  3. Univ. of Missouri, Columbia, MO (United States)
  4. Univ. Innsbruck (Austria)
The first research on the possibilities offered by chlorophyll-a fluorescence to track the daily course of CO2 assimilation by leaves dates back to the last century (Kautsky and Hirsch, 1931). In the second half of the XXth Century, the development of the field of active fluorescence, which relies mainly on the pulse amplitude modulation (PAM) fluorimetry technique, allowed the unraveling of the relationship between the yield of chlorophyll-a fluorescence and photochemistry (linear electron transport), which is modulated by a third process known as non-photochemical quenching (Genty et al., 1989). Since then, active fluorescence has been regularly used in ecophysiology, forestry, and crop sciences to understand the plant response to stress (Schreiber, 2004). Since the beginning of the 2000s, the development of portable field spectrometers allows for measuring passive sun-induced fluorescence (SIF) at strong solar or telluric absorption features, which do not rely on the use of artificial excitation light (e.g., Meroni and Colombo, 2006; Meroni et al., 2009; Perez-Priego et al., 2005). Since then, the field has rapidly evolved, and now fluorescence is measurable with automated field spectrometers in the field (Grossmann et al., 2018; Gu et al., 2019b; Rossini et al., 2010), airborne platforms (Rascher et al., 2015; Zarco-Tejada et al., 2000), and satellites (Guanter et al., 2012; Sun et al., 2018). These advances offer the potential to couple ecosystem-scale measurements of CO2 fluxes and SIF to probe new aspects related to ecosystem structural impacts on SIF andphotosynthesis processes at different time-scales and on different ecosystems (e.g., Damm et al., 2010; Magney et al., 2019; Porcar-Castell et al., 2021). While SIF has been proven as a good proxy of gross primary productivity (GPP), mainly across large spatial and temporal gradients, a series of studies showed that different factors could confound this relationship, namely different canopy structures (e.g., Dechant et al., 2020; Migliavacca et al., 2017), stress conditions (e.g., Martini et al., 2022; Wieneke et al., 2018; Wohlfahrt et al., 2018), nutritional conditions (Cendrero-Mateo et al., 2015; Martini et al., 2019), species-specific differences (e.g., Van Wittenberghe et al., 2013) and light regimes (e.g., Liu and Liu, 2018). At the same time, the modeling of SIF developed rapidly (Gu et al., 2019a; Han et al., 2022; Han et al., 2021; van der Tol et al., 2014; van der Tol et al., 2009) and with an increasing degree of realism, offering the possibility to retrieve important vegetation parameters from remote sensing (Pacheco-Labrador et al., 2019; Verrelst et al., 2015; Verrelst et al., 2016; Zhang et al., 2014). Excellent and comprehensive reviews of the field are by (Mohammed et al., 2019; Porcar-Castell et al., 2021; Porcar-Castell et al., 2014; Sun et al., 2023a; Sun et al., 2023b). Despite the exponential increase in the number of publications in the field, significant progress is still needed. Here, this special issue aims to report foundational SIF science, including theoretical modeling and measurement-based research that is urgently needed to unleash the full potential of SIF for physiological and ecological applications at scales spanning from leaf to globe. The 14 articles collected in this special issue reported on the following specific aspects: first, technical capabilities enabling spectrally resolved SIF observations and their inter-comparability in space and time; second, theoretical developments in SIF-photosynthesis relationships to correctly interpret the signal and extract mechanistic information on vegetation structure and function; third, evaluation of the potential of SIF to track process beyond photosynthesis, such as transpiration; fourth, large scale-applications of SIF observations; and finally, upscaling fluorescence from leaf to canopy scales.
Research Organization:
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
Grant/Contract Number:
AC05-00OR22725
OSTI ID:
2203796
Journal Information:
Agricultural and Forest Meteorology, Journal Name: Agricultural and Forest Meteorology Vol. 337; ISSN 0168-1923
Publisher:
ElsevierCopyright Statement
Country of Publication:
United States
Language:
English

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High resolution field spectroscopy measurements for estimating gross ecosystem production in a rice field journal August 2010
Assessing bi-directional effects on the diurnal cycle of measured solar-induced chlorophyll fluorescence in crop canopies journal December 2020
Simulating spatially distributed solar-induced chlorophyll fluorescence using a BEPS-SCOPE coupling framework journal December 2020
On the seasonal relation of sun-induced chlorophyll fluorescence and transpiration in a temperate mixed forest journal July 2021
Modelling the influence of incident radiation on the SIF-based GPP estimation for maize journal September 2021
Estimating evapotranspiration using remotely sensed solar-induced fluorescence measurements journal March 2022
Gross primary production (GPP) and red solar induced fluorescence (SIF) respond differently to light and seasonal environmental conditions in a subalpine conifer forest journal April 2022
Fluorescence ratio and photochemical reflectance index as a proxy for photosynthetic quantum efficiency of photosystem II along a phosphorus gradient journal July 2022
Monitoring drought impacts on crop productivity of the U.S. Midwest with solar-induced fluorescence: GOSIF outperforms GOME-2 SIF and MODIS NDVI, EVI, and NIRv journal August 2022
Physiological dynamics dominate the response of canopy far-red solar-induced fluorescence to herbicide treatment journal August 2022
Comparison of a UAV- and an airborne-based system to acquire far-red sun-induced chlorophyll fluorescence measurements over structurally different crops journal August 2022
A precise method unaffected by atmospheric reabsorption for ground-based retrieval of red and far-red sun-induced chlorophyll fluorescence journal October 2022
Estimation of global GPP from GOME-2 and OCO-2 SIF by considering the dynamic variations of GPP-SIF relationship journal November 2022
Impact of radiation variations on temporal upscaling of instantaneous Solar-Induced Chlorophyll Fluorescence journal December 2022
The photosynthetic response of spectral chlorophyll fluorescence differs across species and light environments in a boreal forest ecosystem journal May 2023
Red solar-induced chlorophyll fluorescence as a robust proxy for ecosystem-level photosynthesis in a rice field journal June 2023
Upward and downward solar-induced chlorophyll fluorescence yield indices of four tree species as indicators of traffic pollution in Valencia journal February 2013
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Global sensitivity analysis of the SCOPE model: What drives simulated canopy-leaving sun-induced fluorescence? journal September 2015
Evaluating the predictive power of sun-induced chlorophyll fluorescence to estimate net photosynthesis of vegetation canopies: A SCOPE modeling study journal April 2016
Overview of Solar-Induced chlorophyll Fluorescence (SIF) from the Orbiting Carbon Observatory-2: Retrieval, cross-mission comparison, and global monitoring for GPP journal May 2018
PhotoSpec: A new instrument to measure spatially distributed red and far-red Solar-Induced Chlorophyll Fluorescence journal October 2018
Linking photosynthesis and sun-induced fluorescence at sub-daily to seasonal scales journal December 2018
Remote sensing of solar-induced chlorophyll fluorescence (SIF) in vegetation: 50 years of progress journal September 2019
Multiple-constraint inversion of SCOPE. Evaluating the potential of GPP and SIF for the retrieval of plant functional traits journal December 2019
Canopy structure explains the relationship between photosynthesis and sun-induced chlorophyll fluorescence in crops journal May 2020
Advancing Terrestrial Ecosystem Science With a Novel Automated Measurement System for Sun‐Induced Chlorophyll Fluorescence for Integration With Eddy Covariance Flux Networks journal January 2019
Chlorophyll a fluorescence illuminates a path connecting plant molecular biology to Earth-system science journal August 2021
Sun-induced fluorescence and gross primary productivity during a heat wave journal September 2018
Mechanistic evidence for tracking the seasonality of photosynthesis with solar-induced fluorescence journal May 2019
Influence of the canopy BRDF characteristics and illumination conditions on the retrieval of solar-induced chlorophyll fluorescence journal December 2017
Linking chlorophyll a fluorescence to photosynthesis for remote sensing applications: mechanisms and challenges journal May 2014
Plant chlorophyll fluorescence: active and passive measurements at canopy and leaf scales with different nitrogen treatments journal October 2015
The roles of photochemical and non-photochemical quenching in regulating photosynthesis depend on the phases of fluctuating light conditions journal October 2021
Detection of water stress in orchard trees with a high-resolution spectrometer through chlorophyll fluorescence in-filling of the O/sub 2/-A band journal December 2005
Estimation of vegetation photosynthetic capacity from space-based measurements of chlorophyll fluorescence for terrestrial biosphere models journal August 2014
Sun-induced fluorescence - a new probe of photosynthesis: First maps from the imaging spectrometer  HyPlant journal September 2015
Remote sensing of sun-induced fluorescence to improve modeling of diurnal courses of gross primary production (GPP): RS OF SUN-INDUCED FLUORESCENCE TO IMPROVE MODELING OF GPP journal January 2010
Plant functional traits and canopy structure control the relationship between photosynthetic CO 2 uptake and far-red sun-induced fluorescence in a Mediterranean grassland under different nutrient availability journal February 2017
Sun‐induced Chl fluorescence and its importance for biophysical modeling of photosynthesis based on light reactions journal April 2019
Heatwave breaks down the linearity between sun‐induced fluorescence and gross primary production journal January 2022
The physiological basis for estimating photosynthesis from Chl a fluorescence journal March 2022
An integrated model of soil-canopy spectral radiances, photosynthesis, fluorescence, temperature and energy balance journal January 2009

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